Entry: PS00555

General information about the entry

Entry name [info] ICOSAH_VIR_COAT_S
Accession [info] PS00555
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1997 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00480

Name and characterization of the entry

Description [info] Plant viruses icosahedral capsid proteins 'S' region signature.
Pattern [info]
[FYW]-x-[PSTA]-x(7)-G-x-[LIVM]-x-[LIVM]-x-[FYWI]-x(2)-D-x(5)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.44 %
Recall (true positives / (true positives + false negatives)) 94.44 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
17 sequences

CAPSD_AMCV  (P14836), CAPSD_CARMS (Q9Q6X7), CAPSD_CARMV (P04383), 
CAPSD_CFMVN (Q66012), CAPSD_CNV   (P15183), CAPSD_CRV   (P17456), 
CAPSD_MCMVK (P11642), CAPSD_MNSV  (P19899), CAPSD_POLVP (Q9QBU3), 
CAPSD_RCNMV (P22955), CAPSD_SBMVA (O72158), CAPSD_SCPMV (P03607), 
CAPSD_TBSVB (P11795), CAPSD_TBSVC (P11689), CAPSD_TCV   (P06663), 
CAPSD_TNVA  (P22959), CAPSD_TNVD  (P27210)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

CAPSD_PNLV  (Q5NDM8)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

TCTP2_DICDI (Q54RX1)

		
PDB
[Detailed view]
8 PDB

1OPO; 2TBV; 2ZAH; 3ZX8; 3ZX9; 3ZXA; 4LLF; 4SBV

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