Entry: PS00555

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General information about the entry

Entry name [info] ICOSAH_VIR_COAT_S
Accession [info] PS00555
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1997 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00480

Name and characterization of the entry

Description [info] Plant viruses icosahedral capsid proteins 'S' region signature.
Pattern [info]
[FYW]-x-[PSTA]-x(7)-G-x-[LIVM]-x-[LIVM]-x-[FYWI]-x(2)-D-x(5)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.44 %
Recall (true positives / (true positives + false negatives)) 94.44 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
17 sequences

CAPSD_AMCV  (P14836), CAPSD_CARMS (Q9Q6X7), CAPSD_CARMV (P04383), 
CAPSD_CFMVN (Q66012), CAPSD_CNV   (P15183), CAPSD_CRV   (P17456), 
CAPSD_MCMVK (P11642), CAPSD_MNSV  (P19899), CAPSD_POLVP (Q9QBU3), 
CAPSD_RCNMV (P22955), CAPSD_SBMVA (O72158), CAPSD_SCPMV (P03607), 
CAPSD_TBSVB (P11795), CAPSD_TBSVC (P11689), CAPSD_TCV   (P06663), 
CAPSD_TNVA  (P22959), CAPSD_TNVD  (P27210)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

CAPSD_PNLV  (Q5NDM8)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

TCTP2_DICDI (Q54RX1)

		
PDB
[Detailed view]
8 PDB

1OPO; 2TBV; 2ZAH; 3ZX8; 3ZX9; 3ZXA; 4LLF; 4SBV

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