Entry: PS00572

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F1_1
Accession [info] PS00572
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-1992 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00495
Associated ProRule [info] PRU10055

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 1 active site.
Pattern [info]
[LIVMFSTC]-[LIVFYS]-[LIV]-[LIVMST]-E-N-G-[LIVMFAR]-[CSAGN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 166 in 164 different sequences
Number of true positive hits 107 in 105 different sequences
Number of 'unknown' hits 0
Number of false positive hits 59 in 59 different sequences
Number of false negative sequences 95
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 64.46 %
Recall (true positives / (true positives + false negatives)) 52.97 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
105 sequences

ABGA_CLOLO  (Q46130), ARBB_DICCH  (P26206), ASCB_ECOLI  (P24240), 
BGAL_PYRWO  (O52629), BGAL_SULAC  (P14288), BGAL_SULSH  (P50388), 
BGAL_SULSO  (P22498), BGL1B_PHACH (Q25BW4), BGL29_ORYSJ (A3C053), 
BGL34_ARATH (Q8GRX1), BGL35_ARATH (Q3ECS3), BGL37_ARATH (Q9C5C2), 
BGL38_ARATH (P37702), BGL45_ARATH (O80689), BGL46_ARATH (O80690), 
BGL47_ARATH (Q9SVS1), BGLA_BACCI  (Q03506), BGLA_BACSU  (P42973), 
BGLA_CLOTH  (P26208), BGLA_ECOLI  (Q46829), BGLA_ENTAG  (Q59437), 
BGLA_PAEPO  (P22073), BGLA_THEMA  (Q08638), BGLA_THENE  (P0C946), 
BGLA_THENN  (B9K7M5), BGLB_ECOLI  (P11988), BGLB_PAEPO  (P22505), 
BGLB_THEBI  (P38645), BGLC_BACSU  (P42403), BGLFU_BIFBR (P94248), 
BGLH_BACSU  (P40740), BGLS_AGRSA  (P12614), BGLS_CALSA  (P10482), 
BGLS_TRIRP  (P26204), BGLT_TRIRP  (P26205), CASB_KLEOX  (Q48409), 
COX1_OSTNU  (Q9B840), GMUD_BACSU  (O05508), HGGL1_MAIZE (P49235), 
HGGL2_MAIZE (Q41761), HGGL_SECCE  (Q9FYS3), HGL1A_WHEAT (Q1XIR9), 
HGL1B_WHEAT (Q1XH05), HGL1C_WHEAT (Q1XH04), HGL1D_WHEAT (D5MTF8), 
LACG2_STRPN (Q97QL9), LACG2_STRR6 (Q8DPP6), LACG_CLOAB  (Q97EZ2), 
LACG_LACAI  (P50977), LACG_LACCA  (P14696), LACG_LACCB  (B3W7I3), 
LACG_LACLL  (P11546), LACG_LACRH  (Q29ZJ1), LACG_LEPBD  (C7N8L9), 
LACG_STAA1  (A7X569), LACG_STAA2  (A6U3R9), LACG_STAA3  (Q2FEU3), 
LACG_STAA8  (Q2G2D5), LACG_STAA9  (A5IUX8), LACG_STAAB  (Q2YYJ9), 
LACG_STAAC  (Q5HE16), LACG_STAAE  (A6QJ33), LACG_STAAM  (P67767), 
LACG_STAAN  (P67768), LACG_STAAR  (Q6GEP0), LACG_STAAS  (Q6G7C5), 
LACG_STAAT  (A8YYF6), LACG_STAAU  (P11175), LACG_STAAW  (P67769), 
LACG_STAEQ  (Q5HM41), LACG_STAES  (Q8CNF8), LACG_STAHJ  (Q4L868), 
LACG_STRA3  (Q8E4S2), LACG_STREM  (B4U1G6), LACG_STRGC  (Q9EV38), 
LACG_STRMU  (P50978), LACG_STRP1  (Q99Y18), LACG_STRP3  (P0DB40), 
LACG_STRP6  (Q5X9Y7), LACG_STRP8  (Q8NZE1), LACG_STRPB  (Q1J9V2), 
LACG_STRPC  (Q1JK01), LACG_STRPD  (Q1JEZ3), LACG_STRPF  (Q1J4Q7), 
LACG_STRPG  (A2RGE8), LACG_STRPJ  (B8ZQ59), LACG_STRPM  (Q48RC8), 
LACG_STRPQ  (P0DB41), LACG_STRS7  (C0MDS5), LACG_STRSV  (A3CPH0), 
LACG_STRU0  (B9DU98), LACG_STRZJ  (C1CEE7), LCTL_HUMAN  (Q6UWM7), 
LPH_HUMAN   (P09848), LPH_RABIT   (P09849), LPH_RAT     (Q02401), 
MYR1_SINAL  (P29737), MYR2_SINAL  (P29738), MYR3_SINAL  (P29092), 
MYRA_SINAL  (P29736), MYRO_BRANA  (Q00326), SFR2_ARATH  (Q93Y07), 
SFR2_ORYSJ  (Q8L6H7), VICHY_VICSN (A2SY66), Y997_RICBR  (Q1RHT6)
» More

UniProtKB/Swiss-Prot
False negative sequences
95 sequences

BAGBG_DALNI (A3RF67), BGL01_ARATH (Q3ECW8), BGL01_ORYSJ (Q5QMT0), 
BGL02_ARATH (Q9FMD8), BGL02_ORYSJ (B7F8N7), BGL03_ARATH (O65458), 
BGL03_ORYSJ (Q8RZL1), BGL04_ARATH (Q9ZUI3), BGL04_ORYSJ (Q5N863), 
BGL05_ARATH (Q8RXN9), BGL05_ORYSJ (Q5JK35), BGL06_ARATH (Q682B4), 
BGL06_ORYSJ (Q8L7J2), BGL07_ARATH (Q9LZJ1), BGL07_ORYSJ (Q75I93), 
BGL08_ARATH (Q67XN2), BGL08_ORYSJ (Q75I94), BGL09_ARATH (Q9STP4), 
BGL09_ORYSJ (B7ECS8), BGL10_ARATH (Q93ZI4), BGL10_ORYSJ (Q7F9K4), 
BGL11_ARATH (B3H5Q1), BGL11_ORYSJ (Q7XKV5), BGL12_ARATH (Q9FH03), 
BGL12_ORYSJ (Q7XKV4), BGL13_ARATH (Q9LU02), BGL13_ORYSJ (Q7XKV2), 
BGL14_ARATH (Q9SLA0), BGL14_ORYSJ (Q7XPY7), BGL15_ARATH (O64879), 
BGL15_ORYSJ (Q7XPY5), BGL16_ARATH (Q9M1D0), BGL16_ORYSJ (Q7XSK2), 
BGL17_ARATH (O64882), BGL17_ORYSJ (Q7XSK1), BGL18_ARATH (Q9SE50), 
BGL18_ORYSJ (Q7XSK0), BGL19_ARATH (Q9LIF9), BGL19_ORYSJ (Q0DIT2), 
BGL1A_PHACH (Q25BW5), BGL20_ARATH (Q84WV2), BGL20_ORYSJ (B9FHH2), 
BGL21_ARATH (Q9C525), BGL21_ORYSJ (Q60DY1), BGL22_ARATH (Q9C8Y9), 
BGL22_ORYSJ (Q60DX8), BGL23_ARATH (Q9SR37), BGL23_ORYSJ (Q6L597), 
BGL24_ARATH (Q9LKR7), BGL24_ORYSJ (Q5Z9Z0), BGL25_ARATH (O82772), 
BGL25_ORYSJ (Q0DA21), BGL26_ARATH (O64883), BGL26_ORYSJ (A3BMZ5), 
BGL27_ARATH (Q9M1D1), BGL27_ORYSJ (Q84YK7), BGL28_ARATH (Q4V3B3), 
BGL28_ORYSJ (Q7EXZ4), BGL29_ARATH (Q8GXT2), BGL30_ARATH (Q9M1C9), 
BGL30_ORYSJ (Q0J0N4), BGL31_ARATH (Q9FLU9), BGL31_ORYSJ (B7F7K7), 
BGL32_ARATH (Q9FLU8), BGL32_ORYSJ (Q0J0G2), BGL33_ARATH (O48779), 
BGL33_ORYSJ (Q0J0G1), BGL34_ORYSJ (Q339X2), BGL35_ORYSJ (Q53NF0), 
BGL36_ARATH (Q9C8K1), BGL38_ORYSJ (Q2QSR8), BGL39_ARATH (Q3E8E5), 
BGL40_ARATH (Q9FZE0), BGL41_ARATH (Q9FIU7), BGL42_ARATH (Q9FIW4), 
BGL43_ARATH (Q9LV34), BGL44_ARATH (Q9LV33), BGLC_OLEEU  (Q8GVD0), 
FURH_VIBFR  (Q75W17), GBA3_CAVPO  (P97265), GBA3_HUMAN  (Q9H227), 
GBA3_PONAB  (Q5RF65), HIUH_SOYBN  (Q8S3J3), KLOTB_HUMAN (Q86Z14), 
KLOTB_MOUSE (Q99N32), KLOT_HUMAN  (Q9UEF7), KLOT_MACFA  (Q8WP17), 
KLOT_MOUSE  (O35082), KLOT_RAT    (Q9Z2Y9), LACG1_STRPN (Q97SA9), 
LACG1_STRR6 (Q8DQZ1), LCTL_MOUSE  (Q8K1F9), MYRO1_BREBR (Q95X01), 
RG1_RAUSE   (Q9SPP9), SG1_RAUSE   (Q8GU20)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MYRO2_BREBR (P83179)

		
UniProtKB/Swiss-Prot
False positive sequences
59 sequences

ACH1_NEUCR  (P15937), AKR2_ARATH  (Q9SAR5), APT_PSYIN   (A1SX04), 
ATC4_YEAST  (Q12675), BAMC_ECOLI  (P0A903), BAMC_SHIFL  (P0A904), 
CH10_STRA3  (P63768), CH10_STRA5  (P63769), COX1_CHOBI  (P50668), 
COX1_CHOFU  (P50669), COX1_CHOOC  (P67793), COX1_CHOPI  (P67794), 
COX1_CHRKN  (Q9B229), FBIB_MYCLE  (Q9CCK2), GYRA_AMICL  (D5ECW5), 
GYRA_BRAHW  (C0R046), GYRA_CLOAB  (P94605), GYRA_HELPJ  (Q9ZLD9), 
GYRA_HELPY  (P48370), GYRA_STRP1  (Q9L7Q5), GYRA_STRP3  (P0DG02), 
GYRA_STRP6  (Q5XC58), GYRA_STRP8  (Q8P116), GYRA_STRPQ  (P0DG03), 
HFLX_FLAPJ  (A6H294), KDIS_DANRE  (Q7T163), LAC3_ARATH  (Q56YT0), 
MBB1A_DANRE (Q6DRL5), MZT1_ASPCL  (A1CQI3), MZT1_BOTFB  (A6S6H9), 
MZT1_COCIM  (Q1DRC2), MZT1_EMENI  (Q5BDL9), MZT1_SCLS1  (A7EXZ2), 
NCAP_INCAA  (Q6I7C0), NCAP_INCCA  (P08028), NCAP_INCJH  (Q9IMP6), 
NRNA_BACSU  (O34600), NSE1_XENTR  (Q6P881), PII2_ARATH  (Q5PP26), 
RGYR_THEMA  (O51934), RIMS1_HUMAN (Q86UR5), RIMS1_MOUSE (Q99NE5), 
RIMS1_RAT   (Q9JIR4), RIMS3_HUMAN (Q9UJD0), RPOB1_METVS (P41557), 
RUVC_MYCLE  (P40834), SC24C_HUMAN (P53992), SFSA_ACTPJ  (B0BSG6), 
SPTCS_HUMAN (Q96JI7), SSTT_STRA1  (Q3JZQ1), SSTT_STRA3  (Q8E3S4), 
SSTT_STRA5  (Q8DY58), UBP5_YEAST  (P39944), URED_PROM1  (A2C4R9), 
URED_PROMT  (Q46IY6), VINT_BPL2   (P42540), Y1011_HAEIN (P44093), 
YDGC_BACSU  (P96701), YI31_SCHPO  (Q9HE12)
» More

PDB
[Detailed view]
88 PDB

1BGA; 1BGG; 1CBG; 1DWA; 1DWF; 1DWG; 1DWH; 1DWI; 1DWJ; 1E1E; 1E1F; 1E4I; 1E4L; 1E4M; 1E4N; 1E55; 1E56; 1E6Q; 1E6S; 1E6X; 1E70; 1E71; 1E72; 1E73; 1GOW; 1H49; 1HXJ; 1MYR; 1OD0; 1OIF; 1OIM; 1OIN; 1PBG; 1QOX; 1TR1; 1UWI; 1UWQ; 1UWR; 1UWS; 1UWT; 1UWU; 1UYQ; 1UZ1; 1V08; 1W3J; 1W9B; 1W9D; 2CBU; 2CBV; 2CEQ; 2CER; 2CES; 2CET; 2DGA; 2J75; 2J77; 2J78; 2J79; 2J7B; 2J7C; 2J7D; 2J7E; 2J7F; 2J7G; 2J7H; 2JAL; 2JIE; 2O9P; 2O9R; 2O9T; 2PBG; 2VRJ; 2WBG; 2WC3; 2WC4; 2WXD; 2XHY; 2Z1S; 3AIQ; 3AIR; 3AIS; 3AIU; 3AIV; 3AIW; 3PBG; 4EAM; 4EAN; 4GXP
» More

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