Entry: PS00572

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F1_1
Accession [info] PS00572
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-1992 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00495
Associated ProRule [info] PRU10055

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 1 active site.
Pattern [info]
[LIVMFSTC]-[LIVFYS]-[LIV]-[LIVMST]-E-N-G-[LIVMFAR]-[CSAGN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 166 in 164 different sequences
Number of true positive hits 107 in 105 different sequences
Number of 'unknown' hits 0
Number of false positive hits 59 in 59 different sequences
Number of false negative sequences 96
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 64.46 %
Recall (true positives / (true positives + false negatives)) 52.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
105 sequences

ABGA_CLOLO  (Q46130    ), ARBB_DICCH  (P26206    ), ASCB_ECOLI  (P24240    ), 
BGAL_PYRWO  (O52629    ), BGAL_SULAC  (P14288    ), BGAL_SULSH  (P50388    ), 
BGAL_SULSO  (P22498    ), BGL1B_PHACH (Q25BW4    ), BGL29_ORYSJ (A3C053    ), 
BGL34_ARATH (Q8GRX1    ), BGL35_ARATH (Q3ECS3    ), BGL37_ARATH (Q9C5C2    ), 
BGL38_ARATH (P37702    ), BGL45_ARATH (O80689    ), BGL46_ARATH (O80690    ), 
BGL47_ARATH (Q9SVS1    ), BGLA_BACCI  (Q03506    ), BGLA_BACSU  (P42973    ), 
BGLA_CLOTH  (P26208    ), BGLA_ECOLI  (Q46829    ), BGLA_ENTAG  (Q59437    ), 
BGLA_PAEPO  (P22073    ), BGLA_THEMA  (Q08638    ), BGLA_THENE  (P0C946    ), 
BGLA_THENN  (B9K7M5    ), BGLB_ECOLI  (P11988    ), BGLB_PAEPO  (P22505    ), 
BGLB_THEBI  (P38645    ), BGLC_BACSU  (P42403    ), BGLFU_BIFBR (P94248    ), 
BGLH_BACSU  (P40740    ), BGLS_AGRSA  (P12614    ), BGLS_CALSA  (P10482    ), 
BGLS_TRIRP  (P26204    ), BGLT_TRIRP  (P26205    ), CASB_KLEOX  (Q48409    ), 
COX1_OSTNU  (Q9B840    ), GMUD_BACSU  (O05508    ), HGGL1_MAIZE (P49235    ), 
HGGL2_MAIZE (Q41761    ), HGGL_SECCE  (Q9FYS3    ), HGL1A_WHEAT (Q1XIR9    ), 
HGL1B_WHEAT (Q1XH05    ), HGL1C_WHEAT (Q1XH04    ), HGL1D_WHEAT (D5MTF8    ), 
LACG2_STRPN (Q97QL9    ), LACG2_STRR6 (Q8DPP6    ), LACG_CLOAB  (Q97EZ2    ), 
LACG_LACAI  (P50977    ), LACG_LACCA  (P14696    ), LACG_LACCB  (B3W7I3    ), 
LACG_LACLL  (P11546    ), LACG_LACRH  (Q29ZJ1    ), LACG_LEPBD  (C7N8L9    ), 
LACG_STAA1  (A7X569    ), LACG_STAA2  (A6U3R9    ), LACG_STAA3  (Q2FEU3    ), 
LACG_STAA8  (Q2G2D5    ), LACG_STAA9  (A5IUX8    ), LACG_STAAB  (Q2YYJ9    ), 
LACG_STAAC  (Q5HE16    ), LACG_STAAE  (A6QJ33    ), LACG_STAAM  (P67767    ), 
LACG_STAAN  (P67768    ), LACG_STAAR  (Q6GEP0    ), LACG_STAAS  (Q6G7C5    ), 
LACG_STAAT  (A8YYF6    ), LACG_STAAU  (P11175    ), LACG_STAAW  (P67769    ), 
LACG_STAEQ  (Q5HM41    ), LACG_STAES  (Q8CNF8    ), LACG_STAHJ  (Q4L868    ), 
LACG_STRA3  (Q8E4S2    ), LACG_STREM  (B4U1G6    ), LACG_STRGC  (Q9EV38    ), 
LACG_STRMU  (P50978    ), LACG_STRP1  (Q99Y18    ), LACG_STRP3  (P0DB40    ), 
LACG_STRP6  (Q5X9Y7    ), LACG_STRP8  (Q8NZE1    ), LACG_STRPB  (Q1J9V2    ), 
LACG_STRPC  (Q1JK01    ), LACG_STRPD  (Q1JEZ3    ), LACG_STRPF  (Q1J4Q7    ), 
LACG_STRPG  (A2RGE8    ), LACG_STRPJ  (B8ZQ59    ), LACG_STRPM  (Q48RC8    ), 
LACG_STRPQ  (P0DB41    ), LACG_STRS7  (C0MDS5    ), LACG_STRSV  (A3CPH0    ), 
LACG_STRU0  (B9DU98    ), LACG_STRZJ  (C1CEE7    ), LCTL_HUMAN  (Q6UWM7    ), 
LPH_HUMAN   (P09848    ), LPH_RABIT   (P09849    ), LPH_RAT     (Q02401    ), 
MYR1_SINAL  (P29737    ), MYR2_SINAL  (P29738    ), MYR3_SINAL  (P29092    ), 
MYRA_SINAL  (P29736    ), MYRO_BRANA  (Q00326    ), SFR2_ARATH  (Q93Y07    ), 
SFR2_ORYSJ  (Q8L6H7    ), VICHY_VICSN (A2SY66    ), Y997_RICBR  (Q1RHT6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
96 sequences

BAGBG_DALNI (A3RF67    ), BGL01_ARATH (Q3ECW8    ), BGL01_ORYSJ (Q5QMT0    ), 
BGL02_ARATH (Q9FMD8    ), BGL02_ORYSJ (B7F8N7    ), BGL03_ARATH (O65458    ), 
BGL03_ORYSJ (Q8RZL1    ), BGL04_ARATH (Q9ZUI3    ), BGL04_ORYSJ (Q5N863    ), 
BGL05_ARATH (Q8RXN9    ), BGL05_ORYSJ (Q5JK35    ), BGL06_ARATH (Q682B4    ), 
BGL06_ORYSJ (Q8L7J2    ), BGL07_ARATH (Q9LZJ1    ), BGL07_ORYSJ (Q75I93    ), 
BGL08_ARATH (Q67XN2    ), BGL08_ORYSJ (Q75I94    ), BGL09_ARATH (Q9STP4    ), 
BGL09_ORYSJ (B7ECS8    ), BGL10_ARATH (Q93ZI4    ), BGL10_ORYSJ (Q7F9K4    ), 
BGL11_ARATH (B3H5Q1    ), BGL11_ORYSJ (Q7XKV5    ), BGL12_ARATH (Q9FH03    ), 
BGL12_ORYSI (B8AVF0    ), BGL12_ORYSJ (Q7XKV4    ), BGL13_ARATH (Q9LU02    ), 
BGL13_ORYSJ (Q7XKV2    ), BGL14_ARATH (Q9SLA0    ), BGL14_ORYSJ (Q7XPY7    ), 
BGL15_ARATH (O64879    ), BGL15_ORYSJ (Q7XPY5    ), BGL16_ARATH (Q9M1D0    ), 
BGL16_ORYSJ (Q7XSK2    ), BGL17_ARATH (O64882    ), BGL17_ORYSJ (Q7XSK1    ), 
BGL18_ARATH (Q9SE50    ), BGL18_ORYSJ (Q7XSK0    ), BGL19_ARATH (Q9LIF9    ), 
BGL19_ORYSJ (Q0DIT2    ), BGL1A_PHACH (Q25BW5    ), BGL20_ARATH (Q84WV2    ), 
BGL20_ORYSJ (B9FHH2    ), BGL21_ARATH (Q9C525    ), BGL21_ORYSJ (Q60DY1    ), 
BGL22_ARATH (Q9C8Y9    ), BGL22_ORYSJ (Q60DX8    ), BGL23_ARATH (Q9SR37    ), 
BGL23_ORYSJ (Q6L597    ), BGL24_ARATH (Q9LKR7    ), BGL24_ORYSJ (Q5Z9Z0    ), 
BGL25_ARATH (O82772    ), BGL25_ORYSJ (Q0DA21    ), BGL26_ARATH (O64883    ), 
BGL26_ORYSJ (A3BMZ5    ), BGL27_ARATH (Q9M1D1    ), BGL27_ORYSJ (Q84YK7    ), 
BGL28_ARATH (Q4V3B3    ), BGL28_ORYSJ (Q7EXZ4    ), BGL29_ARATH (Q8GXT2    ), 
BGL30_ARATH (Q9M1C9    ), BGL30_ORYSJ (Q0J0N4    ), BGL31_ARATH (Q9FLU9    ), 
BGL31_ORYSJ (B7F7K7    ), BGL32_ARATH (Q9FLU8    ), BGL32_ORYSJ (Q0J0G2    ), 
BGL33_ARATH (O48779    ), BGL33_ORYSJ (Q0J0G1    ), BGL34_ORYSJ (Q339X2    ), 
BGL35_ORYSJ (Q53NF0    ), BGL36_ARATH (Q9C8K1    ), BGL38_ORYSJ (Q2QSR8    ), 
BGL39_ARATH (Q3E8E5    ), BGL40_ARATH (Q9FZE0    ), BGL41_ARATH (Q9FIU7    ), 
BGL42_ARATH (Q9FIW4    ), BGL43_ARATH (Q9LV34    ), BGL44_ARATH (Q9LV33    ), 
BGLC_OLEEU  (Q8GVD0    ), FURH_VIBFR  (Q75W17    ), GBA3_CAVPO  (P97265    ), 
GBA3_HUMAN  (Q9H227    ), GBA3_PONAB  (Q5RF65    ), HIUH_SOYBN  (Q8S3J3    ), 
KLOTB_HUMAN (Q86Z14    ), KLOTB_MOUSE (Q99N32    ), KLOT_HUMAN  (Q9UEF7    ), 
KLOT_MACFA  (Q8WP17    ), KLOT_MOUSE  (O35082    ), KLOT_RAT    (Q9Z2Y9    ), 
LACG1_STRPN (Q97SA9    ), LACG1_STRR6 (Q8DQZ1    ), LCTL_MOUSE  (Q8K1F9    ), 
MYRO1_BREBR (Q95X01    ), RG1_RAUSE   (Q9SPP9    ), SG1_RAUSE   (Q8GU20    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MYRO2_BREBR (P83179    )

		
UniProtKB/Swiss-Prot
False positive sequences
59 sequences

ACH1_NEUCR  (P15937    ), AKR2A_ARATH (Q9SAR5    ), APT_PSYIN   (A1SX04    ), 
ATC4_YEAST  (Q12675    ), BAMC_ECOLI  (P0A903    ), BAMC_SHIFL  (P0A904    ), 
CH10_STRA3  (P63768    ), CH10_STRA5  (P63769    ), COX1_CHOBI  (P50668    ), 
COX1_CHOFU  (P50669    ), COX1_CHOOC  (P67793    ), COX1_CHOPI  (P67794    ), 
COX1_CHRKN  (Q9B229    ), FBIB_MYCLE  (Q9CCK2    ), GYRA_AMICL  (D5ECW5    ), 
GYRA_BRAHW  (C0R046    ), GYRA_CLOAB  (P94605    ), GYRA_HELPJ  (Q9ZLD9    ), 
GYRA_HELPY  (P48370    ), GYRA_STRP1  (Q9L7Q5    ), GYRA_STRP3  (P0DG02    ), 
GYRA_STRP6  (Q5XC58    ), GYRA_STRP8  (Q8P116    ), GYRA_STRPQ  (P0DG03    ), 
HFLX_FLAPJ  (A6H294    ), KDIS_DANRE  (Q7T163    ), LAC3_ARATH  (Q56YT0    ), 
MBB1A_DANRE (Q6DRL5    ), MZT1_ASPCL  (A1CQI3    ), MZT1_BOTFB  (A6S6H9    ), 
MZT1_COCIM  (Q1DRC2    ), MZT1_EMENI  (Q5BDL9    ), MZT1_SCLS1  (A7EXZ2    ), 
NCAP_INCAA  (Q6I7C0    ), NCAP_INCCA  (P08028    ), NCAP_INCJH  (Q9IMP6    ), 
NRNA_BACSU  (O34600    ), NSE1_XENTR  (Q6P881    ), PII2_ARATH  (Q5PP26    ), 
RGYR_THEMA  (O51934    ), RIMS1_HUMAN (Q86UR5    ), RIMS1_MOUSE (Q99NE5    ), 
RIMS1_RAT   (Q9JIR4    ), RIMS3_HUMAN (Q9UJD0    ), RPOB1_METVS (P41557    ), 
RUVC_MYCLE  (P40834    ), SC24C_HUMAN (P53992    ), SFSA_ACTPJ  (B0BSG6    ), 
SPTCS_HUMAN (Q96JI7    ), SSTT_STRA1  (Q3JZQ1    ), SSTT_STRA3  (Q8E3S4    ), 
SSTT_STRA5  (Q8DY58    ), UBP5_YEAST  (P39944    ), URED_PROM1  (A2C4R9    ), 
URED_PROMT  (Q46IY6    ), VINT_BPL2   (P42540    ), Y1011_HAEIN (P44093    ), 
YDGC_BACSU  (P96701    ), YI31_SCHPO  (Q9HE12    )
» more

PDB
[Detailed view]
89 PDB

1BGA; 1BGG; 1CBG; 1DWA; 1DWF; 1DWG; 1DWH; 1DWI; 1DWJ; 1E1E; 1E1F; 1E4I; 1E4L; 1E4M; 1E4N; 1E55; 1E56; 1E6Q; 1E6S; 1E6X; 1E70; 1E71; 1E72; 1E73; 1GOW; 1H49; 1HXJ; 1MYR; 1OD0; 1OIF; 1OIM; 1OIN; 1PBG; 1QOX; 1TR1; 1UWI; 1UWQ; 1UWR; 1UWS; 1UWT; 1UWU; 1UYQ; 1UZ1; 1V08; 1W3J; 1W9B; 1W9D; 2CBU; 2CBV; 2CEQ; 2CER; 2CES; 2CET; 2DGA; 2J75; 2J77; 2J78; 2J79; 2J7B; 2J7C; 2J7D; 2J7E; 2J7F; 2J7G; 2J7H; 2JAL; 2JIE; 2O9P; 2O9R; 2O9T; 2PBG; 2VRJ; 2WBG; 2WC3; 2WC4; 2WXD; 2XHY; 2Z1S; 3AIQ; 3AIR; 3AIS; 3AIU; 3AIV; 3AIW; 3PBG; 4EAM; 4EAN; 4GXP; 5IXE
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission