Entry: PS00574

General information about the entry

Entry name [info] FATTY_ACID_DESATUR_2
Accession [info] PS00574
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1995 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00399

Name and characterization of the entry

Description [info] Fatty acid desaturases family 2 signature.
Pattern [info]
[ST]-[SA]-x(3)-[QR]-[LI]-x(5,6)-D-Y-x(2)-[LIVMFYW]-[LIVM]-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

DESA_SYNY3  (P20388), STAD3_OPHAA (E3PZS0), STAD3_OPHSP (E3PZR9), 
STAD5_ORYSI (A2XSL4), STAD5_ORYSJ (Q40731), STAD6_ARATH (Q84VY3), 
STAD7_ARATH (O22832), STADS_BRANA (Q01771), STAD_BRANA  (P29108), 
STAD_CARTI  (P22243), STAD_CORSA  (P32063), STAD_CUCSA  (P32061), 
STAD_ELAGV  (O24428), STAD_GOSHI  (Q42770), STAD_HELAN  (Q96456), 
STAD_LINUS  (P32062), STAD_OLEEU  (Q43593), STAD_RICCO  (P22337), 
STAD_SIMCH  (Q01753), STAD_SOLTU  (P46253), STAD_SOYBN  (Q42807), 
STAD_SPIOL  (P28645)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

DESA_ARTPT  (Q54794), STAD_SOLCO  (Q41319)

		
PDB
[Detailed view]
8 PDB

1AFR; 1OQ4; 1OQ7; 1OQ9; 1OQB; 2J2F; 2XZ0; 2XZ1

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