Entry: PS00574

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General information about the entry

Entry name [info] FATTY_ACID_DESATUR_2
Accession [info] PS00574
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1995 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00399

Name and characterization of the entry

Description [info] Fatty acid desaturases family 2 signature.
Pattern [info]
[ST]-[SA]-x(3)-[QR]-[LI]-x(5,6)-D-Y-x(2)-[LIVMFYW]-[LIVM]-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

DESA_SYNY3  (P20388), STAD3_OPHAA (E3PZS0), STAD3_OPHSP (E3PZR9), 
STAD5_ORYSI (A2XSL4), STAD5_ORYSJ (Q40731), STAD6_ARATH (Q84VY3), 
STAD7_ARATH (O22832), STADS_BRANA (Q01771), STAD_BRANA  (P29108), 
STAD_CARTI  (P22243), STAD_CORSA  (P32063), STAD_CUCSA  (P32061), 
STAD_ELAGV  (O24428), STAD_GOSHI  (Q42770), STAD_HELAN  (Q96456), 
STAD_LINUS  (P32062), STAD_OLEEU  (Q43593), STAD_RICCO  (P22337), 
STAD_SIMCH  (Q01753), STAD_SOLTU  (P46253), STAD_SOYBN  (Q42807), 
STAD_SPIOL  (P28645)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

DESA_ARTPT  (Q54794), STAD_SOLCO  (Q41319)

		
PDB
[Detailed view]
8 PDB

1AFR; 1OQ4; 1OQ7; 1OQ9; 1OQB; 2J2F; 2XZ0; 2XZ1

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