Entry: PS00574

General information about the entry

Entry name [info] FATTY_ACID_DESATUR_2
Accession [info] PS00574
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-NOV-1995 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00399

Name and characterization of the entry

Description [info] Fatty acid desaturases family 2 signature.
Pattern [info] 
[ST]-[SA]-x(3)-[QR]-[LI]-x(5,6)-D-Y-x(2)-[LIVMFYW]-[LIVM]-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 22 sequences 

DESA_SYNY3  (P20388    ), STAD3_OPHAA (E3PZS0    ), STAD3_OPHSP (E3PZR9    ), 

STAD5_ORYSI (A2XSL4    ), STAD5_ORYSJ (Q40731    ), STAD6_ARATH (Q84VY3    ), 
STAD7_ARATH (O22832    ), STADS_BRANA (Q01771    ), STAD_BRANA  (P29108    ), 
STAD_CARTI  (P22243    ), STAD_CORSA  (P32063    ), STAD_CUCSA  (P32061    ), 
STAD_ELAGV  (O24428    ), STAD_GOSHI  (Q42770    ), STAD_HELAN  (Q96456    ), 
STAD_LINUS  (P32062    ), STAD_OLEEU  (Q43593    ), STAD_RICCO  (P22337    ), 
STAD_SIMCH  (Q01753    ), STAD_SOLTU  (P46253    ), STAD_SOYBN  (Q42807    ), 
STAD_SPIOL  (P28645    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

DESA_ARTPT  (Q54794    ), STAD_SOLCO  (Q41319    )


				
	

	

		PDB
[Detailed view]		
		
			9 PDB
			


			1AFR; 1OQ4; 1OQ7; 1OQ9; 1OQB; 2J2F; 2XZ0; 2XZ1; 4V0J
				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission