Entry: PS00577

General information about the entry
Entry name AVIDIN_1
Accession number PS00577
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00499
Name and characterization of the entry
DescriptionAvidin-like domain signature.
Pattern [DENY]-x(2)-[KRI]-[STA]-x(2)-V-G-x-[DN]-x-[FW]-T-[KR].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 12 hits in 12 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 12 hits in 12 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AVID_CHICK  (P02701), AVR1_CHICK  (O13153), AVR2_CHICK  (P56732), 
AVR3_CHICK  (P56733), AVR4_CHICK  (P56734), AVR6_CHICK  (P56735), 
AVR7_CHICK  (P56736), FBP1_STRPU  (P10079), FBP3_STRPU  (P49013), 
SAV1_STRVL  (Q53532), SAV2_STRVL  (Q53533), SAV_STRAV   (P22629)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AVD; 1AVE; 1DF8; 1HQQ; 1HXL; 1HXZ; 1HY2; 1I9H; 1IJ8; 1KFF; 1KL3; 1KL4; 1KL5; 1LCV; 1LCW; 1LCZ; 1LDO; 1LDQ; 1LEL; 1LUQ; 1MK5; 1MM9; 1MOY; 1N43; 1N4J; 1N7Y; 1N9M; 1N9Y; 1NBX; 1NC9; 1NDJ; 1NQM; 1NQN; 1PTS; 1RAV; 1RST; 1RSU; 1RXH; 1RXJ; 1RXK; 1SLD; 1SLE; 1SLF; 1SLG; 1SRE; 1SRF; 1SRG; 1SRH; 1SRI; 1SRJ; 1STP; 1STR; 1STS; 1SWA; 1SWB; 1SWC; 1SWD; 1SWE; 1SWF; 1SWG; 1SWH; 1SWJ; 1SWK; 1SWL; 1SWN; 1SWO; 1SWP; 1SWQ; 1SWR; 1SWU; 1VWA; 1VWB; 1VWC; 1VWD; 1VWE; 1VWF; 1VWG; 1VWH; 1VWI; 1VWJ; 1VWK; 1VWL; 1VWM; 1VWN; 1VWO; 1VWP; 1VWQ; 1VWR; 1VYO; 1WBI; 1Y52; 1Y53; 1Y55; 2A5B; 2A5C; 2A8G; 2AVI; 2BC3; 2C4I; 2CAM; 2F01; 2FHL; 2FHN; 2G5L; 2GH7; 2IZA; 2IZB; 2IZC; 2IZD; 2IZE; 2IZF; 2IZG; 2IZH; 2IZI; 2IZJ; 2IZK; 2IZL; 2OF8; 2OF9; 2OFA; 2OFB; 2QCB; 2RTA; 2RTB; 2RTC; 2RTD; 2RTE; 2RTF; 2RTG; 2RTH; 2RTI; 2RTJ; 2RTK; 2RTL; 2RTM; 2RTN; 2RTO; 2RTP; 2RTQ; 2RTR; 2WPU; 2Y3E; 2Y3F; 3FDC; 3MM0; 3PK2; 3RDM; 3RDO; 3RDQ; 3RDS; 3RDU; 3RDX; 3RE5; 3RE6; 3RY1; 3RY2; 3T6F; 3T6L; 3VGW; 3VHH; 3VHI; 3VHM; 4DNE; 4GJV;

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