Entry: PS00587

General information about the entry
Entry name GLYCOSYL_HYDROL_F17
Accession number PS00587
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00507
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 17 signature.
Pattern [LIVMKS]-x-[LIVMFYWA](3)-[STAG]-E-[STACVI]-G-[WY]-P-[STN]-x-[SAGQ].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 53 hits in 53 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 53 hits in 53 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 29
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 64.63 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 5,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BGL2_CANAX  (P43070), BGL2_SCHPO  (O13990), BGL2_YEAST  (P15703), 
E1310_ARATH (Q9FHX5), E1312_ARATH (Q8VYE5), E1313_ARATH (Q9FJU9), 
E131_ARATH  (O65399), E131_SOLTU  (P52400), E132_ARATH  (Q9C7U5), 
E132_SOLTU  (P52401), E133_ARATH  (Q9ZU91), E133_SOLTU  (P52402), 
E134_ARATH  (Q94CD8), E135_ARATH  (Q9M088), E136_ARATH  (Q93Z08), 
E138_ARATH  (Q6NKW9), E13A_ARATH  (P33157), E13A_HORVU  (P34742), 
E13A_SOLLC  (Q01412), E13A_SOYBN  (Q03773), E13B_BRACM  (P49236), 
E13B_HEVBR  (P52407), E13B_HORVU  (P15737), E13B_MAIZE  (P49237), 
E13B_NICPL  (P23431), E13B_PEA    (Q03467), E13B_PHAVU  (P23535), 
E13B_PRUPE  (P52408), E13B_SOLLC  (Q01413), E13B_SOYBN  (P52395), 
E13B_TOBAC  (P15797), E13B_VITVI  (A7PQW3), E13B_WHEAT  (P52409), 
E13C_HORVU  (Q02126), E13C_TOBAC  (P23432), E13D_HORVU  (Q02437), 
E13D_TOBAC  (P23433), E13E_HORVU  (Q02438), E13E_TOBAC  (P23546), 
E13F_HORVU  (Q02439), E13F_TOBAC  (P27666), E13G_TOBAC  (P23547), 
E13H_TOBAC  (P36401), E13I_TOBAC  (P52396), E13J_TOBAC  (P52397), 
E13K_TOBAC  (P52398), E13L_TOBAC  (P52399), EA6_ARATH   (Q06915), 
GUB2_HORVU  (P12257), GUB_NICPL   (P07979), SCW10_YEAST (Q04951), 
SCW11_YEAST (P53189), SCW4_YEAST  (P53334)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ALL9_OLEEU  (Q94G86), BTGC_ASPCL  (A1CAI0), BTGC_ASPFC  (B0Y429), 
BTGC_ASPFN  (B8NTP7), BTGC_ASPFU  (Q4WUK5), BTGC_ASPNC  (A2QN74), 
BTGC_ASPOR  (Q2U492), BTGC_ASPTN  (Q0CI96), BTGC_EMENI  (Q5B430), 
BTGC_NEOFI  (A1DEV5), BTGE_ASPCL  (A1C499), BTGE_ASPFC  (B0Y9Q9), 
BTGE_ASPFN  (B8MXP5), BTGE_ASPFU  (Q4WC60), BTGE_ASPOR  (Q2US39), 
BTGE_ASPTN  (Q0CEX9), BTGE_EMENI  (Q5BD29), BTGE_NEOFI  (A1DBG6), 
E1311_ARATH (Q8L868), E137_ARATH  (Q9M069), E139_ARATH  (Q9FGH4), 
EGLC_ASPCL  (A1CD22), EGLC_ASPFC  (B0XXF8), EGLC_ASPFU  (Q4WG16), 
EGLC_ASPNC  (A2QH21), EGLC_ASPOR  (Q2UUZ1), EGLC_ASPTN  (Q0C7P6), 
EGLC_EMENI  (Q5AUT0), EGLC_NEOFI  (A1DJ47)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
E13B_CAPAA  (P86080), E13B_PINHA  (P85483), E13B_VITRO  (P86102)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AQ0; 1GHR; 1GHS;

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