Entry: PS00589

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General information about the entry

Entry name [info] PTS_HPR_SER
Accession [info] PS00589
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00318

Name and characterization of the entry

Description [info] PTS HPR domain serine phosphorylation site signature.
Pattern [info]
[GSTADE]-[KREQSTIV]-x-{EPRK}-{VPGL}-x-[KRDN]-S-[LIVMF](2)-{EVPL}-[LIVM]-
{EATN}-x-[LIVM]-[GADE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 138 in 137 different sequences
Number of true positive hits 77 in 76 different sequences
Number of 'unknown' hits
Number of false positive hits 61 in 61 different sequences
Number of false negative sequences 7
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 55.80 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] phosphorylation at position 8
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
76 sequences

ACRB_ASPCL  (A1CIK0), ACRB_ASPFC  (B0Y4N5), ACRB_ASPFU  (Q4WQG9), 
ACRB_ASPNC  (A2Q9L8), ACRB_ASPOR  (Q2UUI0), ACRB_ASPTN  (Q0CT23), 
ACRB_EMENI  (Q876Q0), ACRB_NEOFI  (A1CW63), CRH_BACHD   (Q9K708), 
CRH_BACSU   (O06976), PTFAH_ECO57 (P69812), PTFAH_ECOLI (P69811), 
PTFAH_HAEIN (P44715), PTFAH_SALTI (Q8Z591), PTFAH_SALTY (P17127), 
PTFAX_RHOCA (P23388), PTFAX_XANCP (P45597), PTHP_BACHD  (Q9K8D2), 
PTHP_BACME  (O69250), PTHP_BACSU  (P08877), PTHP_BACTI  (Q9F166), 
PTHP_BORBU  (O51507), PTHP_BUCAI  (Q9WXI5), PTHP_BUCAP  (Q8KA49), 
PTHP_BUCBP  (Q89B03), PTHP_CHLMU  (Q9PK56), PTHP_CHLPN  (Q9Z9E4), 
PTHP_CHLTR  (O84341), PTHP_CUPNH  (P23537), PTHP_ECO57  (P0AA06), 
PTHP_ECOL6  (P0AA05), PTHP_ECOLI  (P0AA04), PTHP_ENTFA  (P07515), 
PTHP_GEOSE  (P42013), PTHP_HAEIN  (P43921), PTHP_KLEPN  (P16481), 
PTHP_LACCA  (Q9KJV3), PTHP_LACLA  (Q9CJ83), PTHP_LACLC  (Q9ZAD9), 
PTHP_LACSK  (O07125), PTHP_LISIN  (P0A439), PTHP_LISMO  (P0A438), 
PTHP_LYSSH  (Q84F84), PTHP_MYCCT  (P45611), PTHP_MYCGE  (P47287), 
PTHP_MYCPN  (P75061), PTHP_NEIMA  (P65876), PTHP_NEIMB  (P65877), 
PTHP_PSEAE  (Q9HVV2), PTHP_PSEPU  (Q9Z426), PTHP_SALTI  (P0AA08), 
PTHP_SALTY  (P0AA07), PTHP_SHIFL  (P0AA09), PTHP_STAAC  (Q5HH02), 
PTHP_STAAM  (P0A0E1), PTHP_STAAN  (P99143), PTHP_STAAR  (Q6GI02), 
PTHP_STAAS  (Q6GAD1), PTHP_STAAU  (P0A0E3), PTHP_STAAW  (P0A0E2), 
PTHP_STACA  (P23534), PTHP_STAXY  (Q9EYQ9), PTHP_STREI  (Q9WXK8), 
PTHP_STRMU  (P45596), PTHP_STRSL  (P24366), PTHP_TREPA  (O83598), 
PTHP_VIBCH  (Q9KTD6), PTHP_XYLFA  (Q9PDH6), PTHP_XYLFT  (Q87DQ0), 
PTSO_ECO57  (P0A9N2), PTSO_ECOL6  (P0A9N1), PTSO_ECOLI  (P0A9N0), 
PTSO_KLEOX  (P51185), PTSO_PROMH  (Q9ZA86), PTSO_SHIFL  (P0A9N3), 
PTSO_VIBCH  (Q9KP46)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

DHAM_ECOLI  (P37349), PTFAX_ECO57 (Q8XBQ8), PTFAX_ECOL6 (Q8FFD8), 
PTFAX_SHIFL (Q83QP3), PTFX1_ECOLI (P77439), PTFX2_ECOLI (P32670), 
PTSO_SHEVD  (Q9S0K8)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PTHP_STRSA  (P24365)

		
UniProtKB/Swiss-Prot
False positive sequences
61 sequences

206L_IIV6   (Q91FW4), AB39G_ARATH (Q7PC84), AB5F_ARATH  (Q9LV93), 
ABTB1_MOUSE (Q99LJ2), ABTB1_RAT   (Q5XIU1), AMPM_HELVI  (Q11000), 
ATX2_YEAST  (Q12067), DGGGP_SULAC (Q4J8K2), DNLJ_MYCGA  (Q7NAF8), 
FAP1_ARATH  (Q9M1X2), FOXF_DROME  (Q9VS05), GPPA_PSEA6  (Q15N19), 
HNMT_XENTR  (Q0V9P1), ILVD_PROMT  (Q46LF6), IQG1_CANAL  (Q5AH02), 
LRCH1_HUMAN (Q9Y2L9), MABP1_HUMAN (O60336), MABP1_MOUSE (Q6NS57), 
MASZ1_PSESM (Q88AB2), MASZ_ECOL6  (Q8FDN6), MASZ_ECOLI  (P37330), 
MASZ_PSEFL  (O05137), MASZ_PSEPK  (Q88QX8), MASZ_SHIFL  (P59663), 
MHPA1_BURVG (A4JPY1), MHPA_BURXL  (Q13QI0), MHPA_COMTE  (Q9S158), 
MHPA_CUPPJ  (Q476N1), NRG1_RAT    (P43322), OR83A_DROME (Q9VNB3), 
PHYB1_SOLLC (Q9ZS62), PKS5_DICDI  (Q86JI5), PPA14_ARATH (Q84LR6), 
PPA29_ARATH (Q9FMK9), PRIS_HALMA  (Q5V554), RBGA_BACCR  (Q819W8), 
RBGA_BACLD  (Q65JP4), RK14_BIGNA  (Q06J57), RL14_BDEBA  (Q6MJ24), 
RPOC2_PROM1 (A2C4N0), RPOC2_PROMT (Q46J24), RS1_BUCBP   (Q89AJ3), 
RS5_RHOBA   (Q7UN03), SATC_AQUAE  (O67174), SSTT_DESHY  (Q24XD0), 
SYC_TREDE   (Q73RJ6), TEX2_HUMAN  (Q8IWB9), TEX2_MOUSE  (Q6ZPJ0), 
TM41B_HUMAN (Q5BJD5), TM41B_PONAB (Q5RBZ8), TM41B_RAT   (Q5FVN2), 
TM41B_XENLA (Q5U4K5), TM41B_XENTR (A4II98), TP53B_MOUSE (P70399), 
TRM5_ENCCU  (Q8SVV3), TRPG_CRYNB  (P0CN87), TRPG_CRYNH  (P27710), 
TRPG_CRYNJ  (P0CN86), VPS25_DANRE (Q6NWF4), Y389_CHLPN  (Q9Z8F4), 
YCF2_PSINU  (Q8WHW9)
» More

PDB
[Detailed view]
32 PDB

1CM2; 1CM3; 1GGR; 1HDN; 1J6T; 1JEM; 1K1C; 1KA5; 1KKL; 1MU4; 1PCH; 1PFH; 1POH; 1PTF; 1QFR; 1QR5; 1TXE; 1VRC; 1Y4Y; 1Y50; 1Y51; 2HID; 2HPR; 2JEL; 2LRK; 2LRL; 2RLZ; 2XDF; 3CCD; 3EZA; 3EZB; 3EZE
» More

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