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Entry: PS00592
General information about the entry
Entry nameGLYCOSYL_HYDROL_F9_1
Accession numberPS00592
Entry typePATTERN
DateDEC-1991 (CREATED); DEC-1992 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00511
Associated ProRulePRU10059
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 9 active sites signature 1.
Pattern[STV]-x-[LIVMFY]-[STV]-x(2)-G-x-[NKR]-x(4)-[PLIVM]-H-x-R.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 57 hits in 57 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 55 hits in 55 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 17
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 96.49 %
  • Recall (true hits / (true hits + false negatives)): 76.39 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 11,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
CELK_CLOTH  (A3DCH1), CELK_CLOTM  (P0C2S1), GUN10_ARATH (Q8LCP6), 
GUN11_ARATH (O48766), GUN11_ORYSJ (Q7XTH4), GUN12_ARATH (O64889), 
GUN12_ORYSJ (Q7XUK4), GUN13_ARATH (O64890), GUN14_ARATH (Q8S8Q4), 
GUN14_ORYSJ (P0C1U5), GUN15_ARATH (O80497), GUN16_ORYSJ (Q654U4), 
GUN17_ARATH (O81416), GUN17_ORYSJ (Q652F9), GUN18_ARATH (Q9SZ90), 
GUN18_ORYSJ (Q5Z9P8), GUN19_ARATH (Q8L7I0), GUN1_ARATH  (Q9SRX3), 
GUN1_PERAE  (P05522), GUN20_ARATH (Q9SUS0), GUN21_ARATH (Q9STW8), 
GUN21_ORYSJ (Q84Q51), GUN22_ORYSJ (Q6H3Z9), GUN23_ORYSJ (Q69NF5), 
GUN24_ARATH (Q93YQ7), GUN25_ARATH (Q38890), GUN2_ARATH  (Q9FXI9), 
GUN2_PERAE  (P23666), GUN3_ORYSJ  (Q8LQ92), GUN4_ARATH  (O49296), 
GUN4_BACS5  (P28622), GUN4_ORYSJ  (Q6Z715), GUN4_THEFU  (P26221), 
GUN5_ARATH  (Q9M995), GUN6_ARATH  (Q42059), GUN6_DICDI  (P22699), 
GUN6_ORYSJ  (Q6Z2J3), GUN7_ARATH  (O04478), GUN7_ORYSJ  (Q6Z5P2), 
GUN8_ARATH  (Q9CAC1), GUN8_ORYSJ  (Q6K7G9), GUN9_ORYSJ  (P0C1U4), 
GUNA_BACPU  (Q5YLG1), GUNA_CALSA  (P22534), GUNA_CELJU  (P10476), 
GUNA_FIBSU  (P23665), GUNB_CELFI  (P26225), GUNC_BUTFI  (P23658), 
GUND_CLOTH  (A3DDN1), GUND_CLOTM  (P0C2S4), GUNF_CLOTH  (P26224), 
GUNG_CLOCE  (P37700), GUNI_CLOTH  (Q02934), GUNZ_CLOSR  (P23659), 
GUN_PHAVU   (P22503)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GUN10_ORYSJ (Q84R49), GUN13_ORYSI (A2XYW8), GUN13_ORYSJ (Q0J930), 
GUN15_ORYSJ (Q6L4I2), GUN16_ARATH (Q8VYG3), GUN19_ORYSJ (Q6YXT7), 
GUN1_ORYSJ  (Q5NAT8), GUN1_STRRE  (Q05156), GUN20_ORYSJ (Q6ZA06), 
GUN22_ARATH (Q9SVJ4), GUN23_ARATH (Q8GY58), GUN24_ORYSJ (Q69SG5), 
GUN2_ORYSJ  (Q5NAT0), GUN3_ARATH  (Q2V4L8), GUN5_ORYSJ  (Q67UW5), 
GUN9_ARATH  (Q9C9H5), GUNC_CELFA  (P14090)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
GUNX_PRUPE  (P38534)
False positive hits (sequences which do not belong to the set under consideration):
Y1601_METJA (Q58996), YM04_YEAST  (Q04471)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

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PDB
[Detailed view]		1CLC; 1G87; 1GA2; 1JS4; 1K72; 1KFG; 1TF4; 2XFG; 3TF4; 4TF4;

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