Entry: PS00614

General information about the entry

Entry name [info] IGPS
Accession [info] PS00614
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00536

Name and characterization of the entry

Description [info] Indole-3-glycerol phosphate synthase signature.
Pattern [info]
[LIVMFY]-[LIVMC]-x-E-[LIVMFYC]-K-[KRSPQV]-[STAHKRYC]-S-P-[STRK]-x(3,7)-
[LIVMFYST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 401 in 401 different sequences
Number of true positive hits 399 in 399 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.50 %
Recall (true positives / (true positives + false negatives)) 98.28 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
399 sequences

TRPC1_RALSO (Q8XVE6    ), TRPC1_STRCO (O68814    ), TRPC2_RALSO (Q8XS01    ), 
TRPC2_STRCO (Q9Z4X0    ), TRPC_ACAM1  (B0CEU2    ), TRPC_ACIAC  (A1TJQ2    ), 
TRPC_ACIAD  (P00911    ), TRPC_ACIB5  (B7I441    ), TRPC_ACIBC  (B2HVE7    ), 
TRPC_ACIBS  (B0VUS0    ), TRPC_ACIBT  (A3M785    ), TRPC_ACIBY  (B0VBS1    ), 
TRPC_ACIET  (B9MBS5    ), TRPC_ACIF2  (B7JBC0    ), TRPC_ACIF5  (B5ERI2    ), 
TRPC_ACISJ  (A1W2Z8    ), TRPC_AERPE  (Q9Y8T7    ), TRPC_AGRFC  (Q7CYR2    ), 
TRPC_AGRRK  (B9JFD8    ), TRPC_AGRVS  (B9JX64    ), TRPC_ALKMQ  (A6TM74    ), 
TRPC_AQUAE  (O67657    ), TRPC_ARATH  (P49572    ), TRPC_ARCB4  (A8ET36    ), 
TRPC_AROAE  (Q5P2G1    ), TRPC_ARTAT  (A1R5S7    ), TRPC_ARTS2  (A0JVL1    ), 
TRPC_AZOBR  (P26938    ), TRPC_AZOC5  (A8I836    ), TRPC_AZOSB  (A1KAT2    ), 
TRPC_AZOVD  (C1DHY7    ), TRPC_BACAA  (C3P3T8    ), TRPC_BACAC  (C3LAW0    ), 
TRPC_BACAH  (A0RB62    ), TRPC_BACAN  (Q81TM0    ), TRPC_BACC0  (B7JES8    ), 
TRPC_BACC1  (Q73BQ9    ), TRPC_BACC2  (B7IM74    ), TRPC_BACC3  (C1ELE8    ), 
TRPC_BACC4  (B7HGZ9    ), TRPC_BACC7  (B7I0F0    ), TRPC_BACCQ  (B9IU36    ), 
TRPC_BACCR  (Q81GG7    ), TRPC_BACCZ  (Q63EC9    ), TRPC_BACHD  (Q9KCB2    ), 
TRPC_BACHK  (Q6HLU6    ), TRPC_BACLD  (Q65I33    ), TRPC_BACMF  (A7Z618    ), 
TRPC_BACMQ  (P70937    ), TRPC_BACP2  (A8FEK0    ), TRPC_BACPU  (P18268    ), 
TRPC_BACSK  (Q5WGS3    ), TRPC_BACSU  (P03964    ), TRPC_BACTN  (Q8AAD6    ), 
TRPC_BACWK  (A9VJW0    ), TRPC_BEII9  (B2IKL7    ), TRPC_BEUC1  (C5BV85    ), 
TRPC_BORA1  (Q2KU99    ), TRPC_BORBR  (Q7WEK6    ), TRPC_BORPA  (Q7W387    ), 
TRPC_BORPD  (A9HY11    ), TRPC_BORPE  (Q7VU67    ), TRPC_BRADU  (P94327    ), 
TRPC_BRASB  (A5EK25    ), TRPC_BRASO  (A4YVD6    ), TRPC_BRUA1  (B2S5Z1    ), 
TRPC_BRUA2  (Q2YRR4    ), TRPC_BRUAB  (Q57CZ8    ), TRPC_BRUC2  (A9M5F4    ), 
TRPC_BRUMB  (C0RJB1    ), TRPC_BRUME  (P66988    ), TRPC_BRUO2  (A5VQR5    ), 
TRPC_BRUSI  (B0CGT9    ), TRPC_BRUSU  (P66989    ), TRPC_BUCAI  (P57366    ), 
TRPC_BUCAP  (P42393    ), TRPC_BUCBP  (P59459    ), TRPC_BUCDN  (O68427    ), 
TRPC_BUCSC  (Q44603    ), TRPC_BURA4  (B1YSF5    ), TRPC_BURCA  (Q1BSD2    ), 
TRPC_BURCC  (B1JUU5    ), TRPC_BURCH  (A0K458    ), TRPC_BURCM  (Q0BIM8    ), 
TRPC_BURL3  (Q39JZ7    ), TRPC_BURM1  (A9AJ43    ), TRPC_BURM7  (A3MFQ4    ), 
TRPC_BURM9  (A2RYI3    ), TRPC_BURMA  (Q62DD0    ), TRPC_BURMS  (A1UWA0    ), 
TRPC_BURP0  (A3NZP6    ), TRPC_BURP1  (Q3JNB0    ), TRPC_BURP6  (A3NDZ3    ), 
TRPC_BURPS  (Q63QH0    ), TRPC_BURTA  (Q2SUI0    ), TRPC_BURVG  (A4JB67    ), 
TRPC_BURXL  (Q13TW4    ), TRPC_CALS4  (Q8R9M7    ), TRPC_CAMC1  (A8Z6K1    ), 
TRPC_CAMC5  (A7GYQ7    ), TRPC_CAMFF  (A0RNN3    ), TRPC_CAMHC  (A7I2Y2    ), 
TRPC_CAMJ8  (A8FKS2    ), TRPC_CAMJD  (A7H4P0    ), TRPC_CAMJE  (Q9PI11    ), 
TRPC_CAMJJ  (A1VYK3    ), TRPC_CAMJR  (Q5HVR3    ), TRPC_CARHZ  (Q3ABS1    ), 
TRPC_CAUCN  (B8GWP9    ), TRPC_CAUCR  (Q9A727    ), TRPC_CAUSK  (B0SYZ4    ), 
TRPC_CHESB  (Q11HU1    ), TRPC_CHLCH  (Q3AU73    ), TRPC_CHLL2  (B3EG28    ), 
TRPC_CHLL7  (Q3B2C7    ), TRPC_CHLP8  (B3QLY7    ), TRPC_CHLPD  (A1BDW1    ), 
TRPC_CHLPM  (A4SG41    ), TRPC_CHLT3  (B3QZD6    ), TRPC_CHLTE  (Q8KBW1    ), 
TRPC_CHRVO  (Q7NUI6    ), TRPC_CLOAB  (Q97EF3    ), TRPC_CLOCE  (B8I0V0    ), 
TRPC_CLOK1  (B9E149    ), TRPC_CLOK5  (A5N7N8    ), TRPC_CLOPH  (A9KL43    ), 
TRPC_CLOTH  (A3DDS7    ), TRPC_CORGL  (P06560    ), TRPC_CUPNH  (Q0K6I0    ), 
TRPC_CUPPJ  (Q46WU7    ), TRPC_CUPTR  (B3R703    ), TRPC_CYAA5  (B1WQE4    ), 
TRPC_CYAP4  (B8HP79    ), TRPC_CYAP8  (B7K0H0    ), TRPC_DECAR  (Q47AC7    ), 
TRPC_DEHM1  (Q3Z6G5    ), TRPC_DEHMB  (A5FPM3    ), TRPC_DEHMC  (Q3ZZ14    ), 
TRPC_DEIRA  (Q9RUG0    ), TRPC_DELAS  (A9BS06    ), TRPC_DESOH  (A8ZZX0    ), 
TRPC_DESRM  (A4J147    ), TRPC_ECO57  (Q8X7B7    ), TRPC_ECOLI  (P00909    ), 
TRPC_EUBE2  (C4Z138    ), TRPC_EXIS2  (B1YLS2    ), TRPC_EXISA  (C4KZ66    ), 
TRPC_FRAAA  (Q0RFX9    ), TRPC_FRASN  (A8LGR8    ), TRPC_GEOKA  (Q5KXU9    ), 
TRPC_GEOSW  (C5D3D6    ), TRPC_GEOTN  (A4IQ84    ), TRPC_GLOVI  (Q7NHI0    ), 
TRPC_HAEIN  (P46451    ), TRPC_HALSA  (Q9HSC1    ), TRPC_HALVD  (P18304    ), 
TRPC_HELPJ  (Q9ZJU8    ), TRPC_HELPY  (O25867    ), TRPC_HERAR  (A4G1P4    ), 
TRPC_HYPNA  (Q0C1A2    ), TRPC_JANMA  (A6SUH5    ), TRPC_KINRD  (A6WC91    ), 
TRPC_KORVE  (Q1ISJ1    ), TRPC_LACC3  (Q03CY1    ), TRPC_LACCA  (P17217    ), 
TRPC_LACCB  (B3W6W8    ), TRPC_LACLA  (Q01999    ), TRPC_LACLM  (A2RK21    ), 
TRPC_LACLS  (Q02YB4    ), TRPC_LACPL  (Q88WI2    ), TRPC_LARHH  (C1D7J7    ), 
TRPC_LEGPA  (Q5X6S0    ), TRPC_LEGPC  (A5IG82    ), TRPC_LEGPH  (Q5ZX99    ), 
TRPC_LEGPL  (Q5WY75    ), TRPC_LEIXX  (Q6AF68    ), TRPC_LEPCP  (B1Y7I2    ), 
TRPC_LEPIC  (Q72NP6    ), TRPC_LEPIN  (Q8F7V2    ), TRPC_LEUMM  (Q03X00    ), 
TRPC_LISIN  (Q92B79    ), TRPC_LISMC  (C1KVS7    ), TRPC_LISMF  (Q71Z38    ), 
TRPC_LISMH  (B8DHB2    ), TRPC_LISMO  (Q8Y6Q4    ), TRPC_LISW6  (A0AJ82    ), 
TRPC_METJA  (Q58328    ), TRPC_METKA  (Q8TVJ8    ), TRPC_METSB  (B8EJS1    ), 
TRPC_METTH  (O27694    ), TRPC_METTM  (P26939    ), TRPC_MICAN  (B0JTM2    ), 
TRPC_MICLC  (C5CBK6    ), TRPC_MYCA1  (A0QHH0    ), TRPC_MYCA9  (B1MBV4    ), 
TRPC_MYCBO  (P0A633    ), TRPC_MYCBP  (A1KJ27    ), TRPC_MYCBT  (C1ANN3    ), 
TRPC_MYCGI  (A4T9N5    ), TRPC_MYCLB  (B8ZRB9    ), TRPC_MYCLE  (Q9X7C7    ), 
TRPC_MYCMM  (B2HQX7    ), TRPC_MYCPA  (Q740P4    ), TRPC_MYCS2  (A0QX95    ), 
TRPC_MYCSJ  (A3Q119    ), TRPC_MYCSK  (A1UHJ6    ), TRPC_MYCSS  (Q1B7H6    ), 
TRPC_MYCTA  (A5U2W7    ), TRPC_MYCTO  (P9WFX6    ), TRPC_MYCTU  (P9WFX7    ), 
TRPC_MYCUA  (A0PP28    ), TRPC_MYCVP  (A1T8X3    ), TRPC_NAUPA  (B9LAF4    ), 
TRPC_NEIG1  (Q5F645    ), TRPC_NEIG2  (B4RPF1    ), TRPC_NEIMA  (Q9JSN4    ), 
TRPC_NEIMB  (Q9K192    ), TRPC_NEIMF  (A1KRV4    ), TRPC_NITHX  (Q1QMJ9    ), 
TRPC_NITSB  (A6Q3P0    ), TRPC_NITWN  (Q3SRJ3    ), TRPC_NOCSJ  (A1SL44    ), 
TRPC_NOVAD  (Q2G6R0    ), TRPC_OCEIH  (Q8ESU2    ), TRPC_OCHA4  (A6X0L0    ), 
TRPC_OLICO  (B6JG29    ), TRPC_OPITP  (B1ZW79    ), TRPC_PARL1  (A7HXZ6    ), 
TRPC_PARP8  (B2JHI8    ), TRPC_PARPJ  (B2SZ04    ), TRPC_PASMU  (P57855    ), 
TRPC_PELPB  (B4SDV8    ), TRPC_PETMO  (A9BHQ5    ), TRPC_PHEZH  (B4RBX5    ), 
TRPC_PICTO  (Q6L277    ), TRPC_POLNA  (A1VTG7    ), TRPC_POLNS  (B1XSZ1    ), 
TRPC_POLSJ  (Q123F4    ), TRPC_POLSQ  (A4SV52    ), TRPC_PROM0  (A3PED0    ), 
TRPC_PROM1  (A2C462    ), TRPC_PROM2  (A8G6A7    ), TRPC_PROM3  (A2CB59    ), 
TRPC_PROM4  (A9BBR3    ), TRPC_PROM5  (A2BY04    ), TRPC_PROM9  (Q319J2    ), 
TRPC_PROMA  (Q7VAT3    ), TRPC_PROMM  (Q7TV44    ), TRPC_PROMP  (Q7TU64    ), 
TRPC_PROMS  (A2BSL8    ), TRPC_PROMT  (Q46JH4    ), TRPC_PSE14  (Q48NP7    ), 
TRPC_PSEA7  (A6UZF2    ), TRPC_PSEA8  (B7V609    ), TRPC_PSEAB  (Q02TB5    ), 
TRPC_PSEAE  (P20577    ), TRPC_PSEE4  (Q1IFZ9    ), TRPC_PSEF5  (Q4K503    ), 
TRPC_PSEFS  (C3K307    ), TRPC_PSEMY  (A4XZC5    ), TRPC_PSEP1  (A5VXL5    ), 
TRPC_PSEPF  (Q3K5V4    ), TRPC_PSEPG  (B0KK35    ), TRPC_PSEPK  (Q88QR6    ), 
TRPC_PSEPU  (P20578    ), TRPC_PSEPW  (B1JE34    ), TRPC_PSESM  (Q88A03    ), 
TRPC_PSEU5  (A4VHK1    ), TRPC_PYRAB  (Q9V1G3    ), TRPC_PYRAE  (Q8ZYX2    ), 
TRPC_PYRAR  (A4WN19    ), TRPC_PYRFU  (Q8U088    ), TRPC_PYRNV  (B1YBK5    ), 
TRPC_RALPJ  (B2UDK9    ), TRPC_RHIE6  (B3Q0L3    ), TRPC_RHIEC  (Q2K879    ), 
TRPC_RHIL3  (Q1MGE1    ), TRPC_RHILO  (Q98ME3    ), TRPC_RHILW  (B5ZPY7    ), 
TRPC_RHIME  (Q92PR9    ), TRPC_RHISN  (C3MCF2    ), TRPC_RHOBA  (Q7UKJ7    ), 
TRPC_RHOCB  (Q02584    ), TRPC_RHOFT  (Q21SE8    ), TRPC_RHOJR  (Q0SHZ5    ), 
TRPC_RHOOB  (C1AT55    ), TRPC_RHOP2  (Q2IWB0    ), TRPC_RHOP5  (Q07NF6    ), 
TRPC_RHOPB  (Q215B9    ), TRPC_RHOPS  (Q136D2    ), TRPC_RHOPT  (B3Q6M9    ), 
TRPC_RHORT  (Q2RT48    ), TRPC_RHOS1  (A3PHK7    ), TRPC_RHOS4  (Q9ZFA7    ), 
TRPC_RHOS5  (A4WX67    ), TRPC_RHOSK  (B9KMV0    ), TRPC_ROSCS  (A7NMZ8    ), 
TRPC_ROSS1  (A5USQ4    ), TRPC_SACEN  (A4FLL0    ), TRPC_SALRD  (Q2S1Z5    ), 
TRPC_SALTI  (Q8Z7D9    ), TRPC_SALTY  (P00910    ), TRPC_SINMW  (A6U9C5    ), 
TRPC_SPHWW  (A5VBA0    ), TRPC_STAA1  (A7X234    ), TRPC_STAA2  (A6U1J2    ), 
TRPC_STAA3  (Q2FH66    ), TRPC_STAA8  (Q2FYR6    ), TRPC_STAA9  (A5ISQ2    ), 
TRPC_STAAB  (Q2YXU9    ), TRPC_STAAC  (Q9RL78    ), TRPC_STAAE  (A6QGS2    ), 
TRPC_STAAM  (P66990    ), TRPC_STAAN  (P66991    ), TRPC_STAAR  (Q6GH35    ), 
TRPC_STAAS  (Q6G9I9    ), TRPC_STAAT  (A8Z242    ), TRPC_STAAW  (Q8NWU3    ), 
TRPC_STAEQ  (Q5HPH2    ), TRPC_STAES  (Q8CPB2    ), TRPC_STAHJ  (Q4L677    ), 
TRPC_STAS1  (Q49XH6    ), TRPC_STRAW  (Q82A84    ), TRPC_STRGC  (A8AW03    ), 
TRPC_STRGG  (B1W0N8    ), TRPC_STRM5  (B4SLE8    ), TRPC_STRMK  (B2FKL1    ), 
TRPC_STRMU  (Q8DVF5    ), TRPC_STRP2  (Q04IY7    ), TRPC_STRP4  (B5E7M5    ), 
TRPC_STRP7  (C1C968    ), TRPC_STRPI  (B1I7S9    ), TRPC_STRPJ  (B8ZN61    ), 
TRPC_STRPN  (Q97P30    ), TRPC_STRPS  (B2ISS3    ), TRPC_STRR6  (Q8DNM6    ), 
TRPC_STRSV  (A3CLL9    ), TRPC_STRT1  (Q5LYI5    ), TRPC_STRT2  (Q5M348    ), 
TRPC_STRTD  (Q03JB9    ), TRPC_STRZJ  (C1CG44    ), TRPC_STRZP  (C1CMD5    ), 
TRPC_STRZT  (C1CT53    ), TRPC_SULAC  (Q4J8X3    ), TRPC_SULDN  (Q30SM1    ), 
TRPC_SULSO  (Q06121    ), TRPC_SULTO  (Q972A1    ), TRPC_SYNE7  (Q8KPR4    ), 
TRPC_SYNP6  (Q5N575    ), TRPC_SYNPW  (A5GMK4    ), TRPC_SYNPX  (Q7TTU3    ), 
TRPC_SYNR3  (A5GRL0    ), TRPC_SYNS3  (Q0IC57    ), TRPC_SYNS9  (Q3AV87    ), 
TRPC_SYNSC  (Q3AL94    ), TRPC_SYNY3  (Q55508    ), TRPC_THEAC  (Q9HK02    ), 
TRPC_THEFY  (Q47QR5    ), TRPC_THEKO  (Q9YGB5    ), TRPC_THEMA  (Q56319    ), 
TRPC_THEP3  (B0K8T4    ), TRPC_THEPX  (B0K2U1    ), TRPC_THEVO  (Q979V9    ), 
TRPC_THIDA  (Q3SGS2    ), TRPC_TRIEI  (Q10ZM7    ), TRPC_UNCTG  (B1GZC0    ), 
TRPC_VARPS  (C5CKE4    ), TRPC_VEREI  (A1WH73    ), TRPC_VIBCH  (Q9KST5    ), 
TRPC_VIBPA  (P22098    ), TRPC_WOLSU  (Q7M831    ), TRPC_XANAC  (Q8PQ47    ), 
TRPC_XANC5  (Q3BYB5    ), TRPC_XANC8  (Q4UZF8    ), TRPC_XANCP  (Q8PD70    ), 
TRPC_XANOM  (Q2NYD7    ), TRPC_XANOP  (B2SL03    ), TRPC_XANP2  (A7INK2    ), 
TRPC_XYLF2  (B2I6S5    ), TRPC_XYLFA  (Q9PGT5    ), TRPC_XYLFM  (B0U1P0    ), 
TRPC_XYLFT  (Q87EX2    ), TRPC_YERPE  (Q8ZEG8    ), TRPC_ZYMMO  (Q5NQ36    ), 
TRPC_ZYMMT  (Q9XBM3    ), TRPG_ASPAW  (P18483    ), TRPG_ASPNG  (P05328    ), 
TRPG_COCHE  (Q92411    ), TRPG_CRYNB  (P0CN87    ), TRPG_CRYNH  (P27710    ), 
TRPG_CRYNJ  (P0CN86    ), TRPG_EMENI  (P06531    ), TRPG_NEUCR  (P00908    ), 
TRPG_PENCH  (P24773    ), TRPG_PHACH  (P25170    ), TRPG_PHYBL  (P20409    ), 
TRPG_PICAN  (P09575    ), TRPG_SCHPO  (Q92370    ), TRPG_YEAST  (P00937    )
» more

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

TRPC_DESPS  (Q6AMS4    ), TRPC_DICNV  (A5EVG3    ), TRPC_HALMA  (Q5V138    ), 
TRPC_MAGMM  (A0LA39    ), TRPC_METS5  (A4YHD8    ), TRPC_PHYPR  (P24920    ), 
TRPC_SYNFM  (A0LJ58    )
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

OBG_PSYIN   (A1SSB6    ), RT07_SCHPO  (O13744    )

		
PDB
[Detailed view]
19 PDB

1A53; 1I4N; 1IGS; 1J5T; 1JCM; 1JUK; 1JUL; 1LBF; 1LBL; 1PII; 2C3Z; 3T44; 3T55; 3T78; 3TC6; 3TSM; 4FB7; 4IWW; 4IX0
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission