Entry: PS00614

Forthcoming changes to the profile format
General information about the entry

Entry name [info] IGPS
Accession [info] PS00614
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00536

Name and characterization of the entry

Description [info] Indole-3-glycerol phosphate synthase signature.
Pattern [info]
[LIVMFY]-[LIVMC]-x-E-[LIVMFYC]-K-[KRSPQV]-[STAHKRYC]-S-P-[STRK]-x(3,7)-
[LIVMFYST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 401 in 401 different sequences
Number of true positive hits 399 in 399 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.50 %
Recall (true positives / (true positives + false negatives)) 98.28 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
399 sequences

TRPC1_RALSO (Q8XVE6), TRPC1_STRCO (O68814), TRPC2_RALSO (Q8XS01), 
TRPC2_STRCO (Q9Z4X0), TRPC_ACAM1  (B0CEU2), TRPC_ACIAC  (A1TJQ2), 
TRPC_ACIAD  (P00911), TRPC_ACIB5  (B7I441), TRPC_ACIBC  (B2HVE7), 
TRPC_ACIBS  (B0VUS0), TRPC_ACIBT  (A3M785), TRPC_ACIBY  (B0VBS1), 
TRPC_ACIET  (B9MBS5), TRPC_ACIF2  (B7JBC0), TRPC_ACIF5  (B5ERI2), 
TRPC_ACISJ  (A1W2Z8), TRPC_AERPE  (Q9Y8T7), TRPC_AGRRK  (B9JFD8), 
TRPC_AGRT5  (Q7CYR2), TRPC_AGRVS  (B9JX64), TRPC_ALBFT  (Q21SE8), 
TRPC_ALKMQ  (A6TM74), TRPC_AQUAE  (O67657), TRPC_ARATH  (P49572), 
TRPC_ARCB4  (A8ET36), TRPC_AROAE  (Q5P2G1), TRPC_ARTAT  (A1R5S7), 
TRPC_ARTS2  (A0JVL1), TRPC_AZOBR  (P26938), TRPC_AZOC5  (A8I836), 
TRPC_AZOSB  (A1KAT2), TRPC_AZOVD  (C1DHY7), TRPC_BACA2  (A7Z618), 
TRPC_BACAA  (C3P3T8), TRPC_BACAC  (C3LAW0), TRPC_BACAH  (A0RB62), 
TRPC_BACAN  (Q81TM0), TRPC_BACC0  (B7JES8), TRPC_BACC1  (Q73BQ9), 
TRPC_BACC2  (B7IM74), TRPC_BACC3  (C1ELE8), TRPC_BACC4  (B7HGZ9), 
TRPC_BACC7  (B7I0F0), TRPC_BACCQ  (B9IU36), TRPC_BACCR  (Q81GG7), 
TRPC_BACCZ  (Q63EC9), TRPC_BACHD  (Q9KCB2), TRPC_BACHK  (Q6HLU6), 
TRPC_BACLD  (Q65I33), TRPC_BACMQ  (P70937), TRPC_BACP2  (A8FEK0), 
TRPC_BACPU  (P18268), TRPC_BACSK  (Q5WGS3), TRPC_BACSU  (P03964), 
TRPC_BACTN  (Q8AAD6), TRPC_BACWK  (A9VJW0), TRPC_BEII9  (B2IKL7), 
TRPC_BEUC1  (C5BV85), TRPC_BORA1  (Q2KU99), TRPC_BORBR  (Q7WEK6), 
TRPC_BORPA  (Q7W387), TRPC_BORPD  (A9HY11), TRPC_BORPE  (Q7VU67), 
TRPC_BRADU  (P94327), TRPC_BRASB  (A5EK25), TRPC_BRASO  (A4YVD6), 
TRPC_BRUA1  (B2S5Z1), TRPC_BRUA2  (Q2YRR4), TRPC_BRUAB  (Q57CZ8), 
TRPC_BRUC2  (A9M5F4), TRPC_BRUMB  (C0RJB1), TRPC_BRUME  (P66988), 
TRPC_BRUO2  (A5VQR5), TRPC_BRUSI  (B0CGT9), TRPC_BRUSU  (P66989), 
TRPC_BUCAI  (P57366), TRPC_BUCAP  (P42393), TRPC_BUCBP  (P59459), 
TRPC_BUCDN  (O68427), TRPC_BUCSC  (Q44603), TRPC_BURA4  (B1YSF5), 
TRPC_BURCA  (Q1BSD2), TRPC_BURCC  (B1JUU5), TRPC_BURCH  (A0K458), 
TRPC_BURCM  (Q0BIM8), TRPC_BURM1  (A9AJ43), TRPC_BURM7  (A3MFQ4), 
TRPC_BURM9  (A2RYI3), TRPC_BURMA  (Q62DD0), TRPC_BURMS  (A1UWA0), 
TRPC_BURP0  (A3NZP6), TRPC_BURP1  (Q3JNB0), TRPC_BURP6  (A3NDZ3), 
TRPC_BURP8  (B2JHI8), TRPC_BURPP  (B2SZ04), TRPC_BURPS  (Q63QH0), 
TRPC_BURS3  (Q39JZ7), TRPC_BURTA  (Q2SUI0), TRPC_BURVG  (A4JB67), 
TRPC_BURXL  (Q13TW4), TRPC_CAMC1  (A8Z6K1), TRPC_CAMC5  (A7GYQ7), 
TRPC_CAMFF  (A0RNN3), TRPC_CAMHC  (A7I2Y2), TRPC_CAMJ8  (A8FKS2), 
TRPC_CAMJD  (A7H4P0), TRPC_CAMJE  (Q9PI11), TRPC_CAMJJ  (A1VYK3), 
TRPC_CAMJR  (Q5HVR3), TRPC_CARHZ  (Q3ABS1), TRPC_CAUCN  (B8GWP9), 
TRPC_CAUCR  (Q9A727), TRPC_CAUSK  (B0SYZ4), TRPC_CHESB  (Q11HU1), 
TRPC_CHLCH  (Q3AU73), TRPC_CHLL2  (B3EG28), TRPC_CHLP8  (B3QLY7), 
TRPC_CHLPD  (A1BDW1), TRPC_CHLT3  (B3QZD6), TRPC_CHLTE  (Q8KBW1), 
TRPC_CHRVO  (Q7NUI6), TRPC_CLOAB  (Q97EF3), TRPC_CLOCE  (B8I0V0), 
TRPC_CLOK1  (B9E149), TRPC_CLOK5  (A5N7N8), TRPC_CLOPH  (A9KL43), 
TRPC_CLOTH  (A3DDS7), TRPC_CORGL  (P06560), TRPC_CUPNH  (Q0K6I0), 
TRPC_CUPPJ  (Q46WU7), TRPC_CUPTR  (B3R703), TRPC_CYAA5  (B1WQE4), 
TRPC_CYAP4  (B8HP79), TRPC_CYAP8  (B7K0H0), TRPC_DECAR  (Q47AC7), 
TRPC_DEHM1  (Q3Z6G5), TRPC_DEHMB  (A5FPM3), TRPC_DEHMC  (Q3ZZ14), 
TRPC_DEIRA  (Q9RUG0), TRPC_DELAS  (A9BS06), TRPC_DESOH  (A8ZZX0), 
TRPC_DESRM  (A4J147), TRPC_ECO57  (Q8X7B7), TRPC_ECOLI  (P00909), 
TRPC_EUBE2  (C4Z138), TRPC_EXIS2  (B1YLS2), TRPC_EXISA  (C4KZ66), 
TRPC_FRAAA  (Q0RFX9), TRPC_FRASN  (A8LGR8), TRPC_GEOKA  (Q5KXU9), 
TRPC_GEOSW  (C5D3D6), TRPC_GEOTN  (A4IQ84), TRPC_GLOVI  (Q7NHI0), 
TRPC_HAEIN  (P46451), TRPC_HALSA  (Q9HSC1), TRPC_HALVD  (P18304), 
TRPC_HELPJ  (Q9ZJU8), TRPC_HELPY  (O25867), TRPC_HERAR  (A4G1P4), 
TRPC_HYPNA  (Q0C1A2), TRPC_JANMA  (A6SUH5), TRPC_KINRD  (A6WC91), 
TRPC_KORVE  (Q1ISJ1), TRPC_LACC3  (Q03CY1), TRPC_LACCA  (P17217), 
TRPC_LACCB  (B3W6W8), TRPC_LACLA  (Q01999), TRPC_LACLM  (A2RK21), 
TRPC_LACLS  (Q02YB4), TRPC_LACPL  (Q88WI2), TRPC_LARHH  (C1D7J7), 
TRPC_LEGPA  (Q5X6S0), TRPC_LEGPC  (A5IG82), TRPC_LEGPH  (Q5ZX99), 
TRPC_LEGPL  (Q5WY75), TRPC_LEIXX  (Q6AF68), TRPC_LEPCP  (B1Y7I2), 
TRPC_LEPIC  (Q72NP6), TRPC_LEPIN  (Q8F7V2), TRPC_LEUMM  (Q03X00), 
TRPC_LISIN  (Q92B79), TRPC_LISMC  (C1KVS7), TRPC_LISMF  (Q71Z38), 
TRPC_LISMH  (B8DHB2), TRPC_LISMO  (Q8Y6Q4), TRPC_LISW6  (A0AJ82), 
TRPC_METJA  (Q58328), TRPC_METKA  (Q8TVJ8), TRPC_METSB  (B8EJS1), 
TRPC_METTH  (O27694), TRPC_METTM  (P26939), TRPC_MICAN  (B0JTM2), 
TRPC_MICLC  (C5CBK6), TRPC_MYCA1  (A0QHH0), TRPC_MYCA9  (B1MBV4), 
TRPC_MYCBO  (P0A633), TRPC_MYCBP  (A1KJ27), TRPC_MYCBT  (C1ANN3), 
TRPC_MYCGI  (A4T9N5), TRPC_MYCLB  (B8ZRB9), TRPC_MYCLE  (Q9X7C7), 
TRPC_MYCMM  (B2HQX7), TRPC_MYCPA  (Q740P4), TRPC_MYCS2  (A0QX95), 
TRPC_MYCSJ  (A3Q119), TRPC_MYCSK  (A1UHJ6), TRPC_MYCSS  (Q1B7H6), 
TRPC_MYCTA  (A5U2W7), TRPC_MYCTO  (P9WFX6), TRPC_MYCTU  (P9WFX7), 
TRPC_MYCUA  (A0PP28), TRPC_MYCVP  (A1T8X3), TRPC_NAUPA  (B9LAF4), 
TRPC_NEIG1  (Q5F645), TRPC_NEIG2  (B4RPF1), TRPC_NEIMA  (Q9JSN4), 
TRPC_NEIMB  (Q9K192), TRPC_NEIMF  (A1KRV4), TRPC_NITHX  (Q1QMJ9), 
TRPC_NITSB  (A6Q3P0), TRPC_NITWN  (Q3SRJ3), TRPC_NOCSJ  (A1SL44), 
TRPC_NOVAD  (Q2G6R0), TRPC_OCEIH  (Q8ESU2), TRPC_OCHA4  (A6X0L0), 
TRPC_OLICO  (B6JG29), TRPC_OPITP  (B1ZW79), TRPC_PARL1  (A7HXZ6), 
TRPC_PASMU  (P57855), TRPC_PELLD  (Q3B2C7), TRPC_PELPB  (B4SDV8), 
TRPC_PETMO  (A9BHQ5), TRPC_PHEZH  (B4RBX5), TRPC_PICTO  (Q6L277), 
TRPC_POLNA  (A1VTG7), TRPC_POLNS  (B1XSZ1), TRPC_POLSJ  (Q123F4), 
TRPC_POLSQ  (A4SV52), TRPC_PROM0  (A3PED0), TRPC_PROM1  (A2C462), 
TRPC_PROM2  (A8G6A7), TRPC_PROM3  (A2CB59), TRPC_PROM4  (A9BBR3), 
TRPC_PROM5  (A2BY04), TRPC_PROM9  (Q319J2), TRPC_PROMA  (Q7VAT3), 
TRPC_PROMM  (Q7TV44), TRPC_PROMP  (Q7TU64), TRPC_PROMS  (A2BSL8), 
TRPC_PROMT  (Q46JH4), TRPC_PROVI  (A4SG41), TRPC_PSE14  (Q48NP7), 
TRPC_PSEA7  (A6UZF2), TRPC_PSEA8  (B7V609), TRPC_PSEAB  (Q02TB5), 
TRPC_PSEAE  (P20577), TRPC_PSEE4  (Q1IFZ9), TRPC_PSEF5  (Q4K503), 
TRPC_PSEFS  (C3K307), TRPC_PSEMY  (A4XZC5), TRPC_PSEP1  (A5VXL5), 
TRPC_PSEPF  (Q3K5V4), TRPC_PSEPG  (B0KK35), TRPC_PSEPK  (Q88QR6), 
TRPC_PSEPU  (P20578), TRPC_PSEPW  (B1JE34), TRPC_PSESM  (Q88A03), 
TRPC_PSEU5  (A4VHK1), TRPC_PYRAB  (Q9V1G3), TRPC_PYRAE  (Q8ZYX2), 
TRPC_PYRAR  (A4WN19), TRPC_PYRFU  (Q8U088), TRPC_PYRNV  (B1YBK5), 
TRPC_RALPJ  (B2UDK9), TRPC_RHIE6  (B3Q0L3), TRPC_RHIEC  (Q2K879), 
TRPC_RHIL3  (Q1MGE1), TRPC_RHILO  (Q98ME3), TRPC_RHILW  (B5ZPY7), 
TRPC_RHIME  (Q92PR9), TRPC_RHISN  (C3MCF2), TRPC_RHOBA  (Q7UKJ7), 
TRPC_RHOCB  (Q02584), TRPC_RHOOB  (C1AT55), TRPC_RHOP2  (Q2IWB0), 
TRPC_RHOP5  (Q07NF6), TRPC_RHOPB  (Q215B9), TRPC_RHOPS  (Q136D2), 
TRPC_RHOPT  (B3Q6M9), TRPC_RHORT  (Q2RT48), TRPC_RHOS1  (A3PHK7), 
TRPC_RHOS4  (Q9ZFA7), TRPC_RHOS5  (A4WX67), TRPC_RHOSK  (B9KMV0), 
TRPC_RHOSR  (Q0SHZ5), TRPC_ROSCS  (A7NMZ8), TRPC_ROSS1  (A5USQ4), 
TRPC_SACEN  (A4FLL0), TRPC_SALRD  (Q2S1Z5), TRPC_SALTI  (Q8Z7D9), 
TRPC_SALTY  (P00910), TRPC_SINMW  (A6U9C5), TRPC_SPHWW  (A5VBA0), 
TRPC_STAA1  (A7X234), TRPC_STAA2  (A6U1J2), TRPC_STAA3  (Q2FH66), 
TRPC_STAA8  (Q2FYR6), TRPC_STAA9  (A5ISQ2), TRPC_STAAB  (Q2YXU9), 
TRPC_STAAC  (Q9RL78), TRPC_STAAE  (A6QGS2), TRPC_STAAM  (P66990), 
TRPC_STAAN  (P66991), TRPC_STAAR  (Q6GH35), TRPC_STAAS  (Q6G9I9), 
TRPC_STAAT  (A8Z242), TRPC_STAAW  (Q8NWU3), TRPC_STAEQ  (Q5HPH2), 
TRPC_STAES  (Q8CPB2), TRPC_STAHJ  (Q4L677), TRPC_STAS1  (Q49XH6), 
TRPC_STRAW  (Q82A84), TRPC_STRGC  (A8AW03), TRPC_STRGG  (B1W0N8), 
TRPC_STRM5  (B4SLE8), TRPC_STRMK  (B2FKL1), TRPC_STRMU  (Q8DVF5), 
TRPC_STRP2  (Q04IY7), TRPC_STRP4  (B5E7M5), TRPC_STRP7  (C1C968), 
TRPC_STRPI  (B1I7S9), TRPC_STRPJ  (B8ZN61), TRPC_STRPN  (Q97P30), 
TRPC_STRPS  (B2ISS3), TRPC_STRR6  (Q8DNM6), TRPC_STRSV  (A3CLL9), 
TRPC_STRT1  (Q5LYI5), TRPC_STRT2  (Q5M348), TRPC_STRTD  (Q03JB9), 
TRPC_STRZJ  (C1CG44), TRPC_STRZP  (C1CMD5), TRPC_STRZT  (C1CT53), 
TRPC_SULAC  (Q4J8X3), TRPC_SULDN  (Q30SM1), TRPC_SULSO  (Q06121), 
TRPC_SULTO  (Q972A1), TRPC_SYNE7  (Q8KPR4), TRPC_SYNP6  (Q5N575), 
TRPC_SYNPW  (A5GMK4), TRPC_SYNPX  (Q7TTU3), TRPC_SYNR3  (A5GRL0), 
TRPC_SYNS3  (Q0IC57), TRPC_SYNS9  (Q3AV87), TRPC_SYNSC  (Q3AL94), 
TRPC_SYNY3  (Q55508), TRPC_THEAC  (Q9HK02), TRPC_THEFY  (Q47QR5), 
TRPC_THEKO  (Q9YGB5), TRPC_THEMA  (Q56319), TRPC_THEP3  (B0K8T4), 
TRPC_THEPX  (B0K2U1), TRPC_THETN  (Q8R9M7), TRPC_THEVO  (Q979V9), 
TRPC_THIDA  (Q3SGS2), TRPC_TRIEI  (Q10ZM7), TRPC_UNCTG  (B1GZC0), 
TRPC_VARPS  (C5CKE4), TRPC_VEREI  (A1WH73), TRPC_VIBCH  (Q9KST5), 
TRPC_VIBPA  (P22098), TRPC_WOLSU  (Q7M831), TRPC_XANAC  (Q8PQ47), 
TRPC_XANC5  (Q3BYB5), TRPC_XANC8  (Q4UZF8), TRPC_XANCP  (Q8PD70), 
TRPC_XANOM  (Q2NYD7), TRPC_XANOP  (B2SL03), TRPC_XANP2  (A7INK2), 
TRPC_XYLF2  (B2I6S5), TRPC_XYLFA  (Q9PGT5), TRPC_XYLFM  (B0U1P0), 
TRPC_XYLFT  (Q87EX2), TRPC_YERPE  (Q8ZEG8), TRPC_ZYMMO  (Q5NQ36), 
TRPC_ZYMMT  (Q9XBM3), TRPG_ASPAW  (P18483), TRPG_ASPNG  (P05328), 
TRPG_COCHE  (Q92411), TRPG_CRYNB  (P0CN87), TRPG_CRYNH  (P27710), 
TRPG_CRYNJ  (P0CN86), TRPG_EMENI  (P06531), TRPG_NEUCR  (P00908), 
TRPG_PENCH  (P24773), TRPG_PHACH  (P25170), TRPG_PHYBL  (P20409), 
TRPG_PICAN  (P09575), TRPG_SCHPO  (Q92370), TRPG_YEAST  (P00937)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

TRPC_DESPS  (Q6AMS4), TRPC_DICNV  (A5EVG3), TRPC_HALMA  (Q5V138), 
TRPC_MAGSM  (A0LA39), TRPC_METS5  (A4YHD8), TRPC_PHYPR  (P24920), 
TRPC_SYNFM  (A0LJ58)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

OBG_PSYIN   (A1SSB6), RT07_SCHPO  (O13744)

		
PDB
[Detailed view]
19 PDB

1A53; 1I4N; 1IGS; 1J5T; 1JCM; 1JUK; 1JUL; 1LBF; 1LBL; 1PII; 2C3Z; 3T44; 3T55; 3T78; 3TC6; 3TSM; 4FB7; 4IWW; 4IX0
» More

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View entry in raw text format (no links)
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