Entry: PS00647

General information about the entry

Entry name [info] THYMID_PHOSPHORYLASE
Accession [info] PS00647
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00557

Name and characterization of the entry

Description [info] Thymidine and pyrimidine-nucleoside phosphorylases signature.
Pattern [info]
[SA]-[GS]-R-[GA]-[LIV]-x(2)-[TAP]-[GAS]-G-T-x-D-x-[LIVMF]-[EDS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 181 in 181 different sequences
Number of true positive hits 181 in 181 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.45 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
181 sequences

AMPP1_ARCFU (O28928    ), AMPP2_ARCFU (O28927    ), AMPPA_HYPBU (A2BJU0    ), 
AMPPA_META3 (A6UUN0    ), AMPPA_METAC (Q8TL01    ), AMPPA_METB6 (A7I5N0    ), 
AMPPA_METBF (Q466X0    ), AMPPA_METBU (Q12Z64    ), AMPPA_METHJ (Q2FTS5    ), 
AMPPA_METJA (Q58081    ), AMPPA_METLZ (A2SPI9    ), AMPPA_METM5 (A4FZL0    ), 
AMPPA_METM6 (A9A6M7    ), AMPPA_METM7 (A6VIW6    ), AMPPA_METMA (Q8Q0P9    ), 
AMPPA_METMJ (A3CSY4    ), AMPPA_METMP (Q6M0E4    ), AMPPA_METTP (A0B6C9    ), 
AMPPA_METVS (A6URW3    ), AMPPA_NATPD (Q3IP82    ), AMPPA_PYRAB (Q9V163    ), 
AMPPA_PYRFU (Q8U0I2    ), AMPPA_PYRHO (O59251    ), AMPPA_THEGJ (C5A1L9    ), 
AMPPA_THEKO (Q5JCX3    ), AMPPA_THEON (B6YWT7    ), AMPPA_THEPD (A1RWC3    ), 
AMPPA_THESM (C6A2A0    ), PDP_BACSU   (P39142    ), PDP_GEOSE   (P77836    ), 
PDP_STAA3   (Q2FEZ3    ), PDP_STAA8   (Q2FWC1    ), PDP_STAAB   (Q2YUL7    ), 
PDP_STAAC   (Q5HE64    ), PDP_STAAM   (Q99SC3    ), PDP_STAAN   (Q7A4D0    ), 
PDP_STAAR   (Q6GET9    ), PDP_STAAS   (Q6G7H4    ), PDP_STAAW   (Q8NVF6    ), 
PDP_STAEQ   (Q5HM85    ), PDP_STAES   (Q8CNH8    ), PDP_STAHJ   (Q4L818    ), 
RBKTP_AZOC5 (A8IA58    ), RBKTP_CUPNH (Q0K3R9    ), RBKTP_CUPPJ (Q46UT0    ), 
RBKTP_CUPTR (B2AIF3    ), RBKTP_ROSDO (Q16A32    ), TYPH1_ACISJ (A1W631    ), 
TYPH1_CUPNH (Q0KA59    ), TYPH2_ACISJ (A1W9B0    ), TYPH2_CUPPJ (Q46S32    ), 
TYPH_AERHH  (A0KPE3    ), TYPH_AERS4  (A4SRU3    ), TYPH_AGRFC  (Q8UJ08    ), 
TYPH_ALISL  (B6ENG4    ), TYPH_BRADU  (Q89QK7    ), TYPH_BRASB  (A5EG87    ), 
TYPH_BRASO  (A4YRL1    ), TYPH_BURCA  (Q1BV59    ), TYPH_BURCC  (B1KC83    ), 
TYPH_BURCH  (A0KCQ9    ), TYPH_BURCJ  (B4EPB7    ), TYPH_BURL3  (Q39PA6    ), 
TYPH_BURM7  (A3MAQ6    ), TYPH_BURMA  (Q62EC5    ), TYPH_BURMS  (A1UY21    ), 
TYPH_BURP0  (A3P8N2    ), TYPH_BURP6  (A3NN77    ), TYPH_BURPS  (Q63IV6    ), 
TYPH_CHESB  (Q11BH8    ), TYPH_CHRVO  (Q7NRT0    ), TYPH_COLP3  (Q483R6    ), 
TYPH_CROS8  (A7MGA9    ), TYPH_ECO24  (A7ZVS5    ), TYPH_ECO27  (B7UR10    ), 
TYPH_ECO45  (B7MNI9    ), TYPH_ECO55  (B7LEM8    ), TYPH_ECO57  (Q8XB35    ), 
TYPH_ECO5E  (B5Z4R4    ), TYPH_ECO7I  (B7NW62    ), TYPH_ECO81  (B7MTC8    ), 
TYPH_ECO8A  (B7LXU4    ), TYPH_ECODH  (B1XFJ2    ), TYPH_ECOHS  (A8A8B1    ), 
TYPH_ECOL6  (Q8FA52    ), TYPH_ECOLC  (B1IS37    ), TYPH_ECOLI  (P07650    ), 
TYPH_ECOLU  (B7NH50    ), TYPH_ECOSE  (B6I6M9    ), TYPH_ECOSM  (B1LEI7    ), 
TYPH_ENT38  (A4W699    ), TYPH_ERWT9  (B2VH51    ), TYPH_ESCF3  (B7LNS2    ), 
TYPH_HAHCH  (Q2SLV0    ), TYPH_HUMAN  (P19971    ), TYPH_IDILO  (Q5QXT8    ), 
TYPH_KLEP3  (B5Y276    ), TYPH_KLEP7  (A6THZ7    ), TYPH_LEGPA  (Q5X2M8    ), 
TYPH_LEGPC  (A5IFN1    ), TYPH_LEGPH  (Q5ZWR3    ), TYPH_LEGPN  (Q8RNP4    ), 
TYPH_MARMM  (Q0ATA0    ), TYPH_METCA  (Q607P2    ), TYPH_MYCGE  (P47297    ), 
TYPH_MYCPI  (P47717    ), TYPH_MYCPN  (P75052    ), TYPH_MYCTO  (P9WFS0    ), 
TYPH_MYCTU  (P9WFS1    ), TYPH_NITHX  (Q1QM39    ), TYPH_PARL1  (A7HYS8    ), 
TYPH_PECAS  (Q6D991    ), TYPH_PHOPR  (Q6LUH3    ), TYPH_POLSJ  (Q12E97    ), 
TYPH_PROMH  (B4EWA3    ), TYPH_PSEU5  (A4VHV6    ), TYPH_PSYIN  (A1SYK5    ), 
TYPH_RALSO  (Q8Y2X7    ), TYPH_RHILO  (Q98GV5    ), TYPH_RHIME  (Q92T50    ), 
TYPH_RHOFT  (Q21W90    ), TYPH_RHOP5  (Q07J10    ), TYPH_RHOPA  (Q6N2A3    ), 
TYPH_RHOPB  (Q20Z21    ), TYPH_RHOPS  (Q13B59    ), TYPH_RHOPT  (B3QKL9    ), 
TYPH_SALA4  (B5F525    ), TYPH_SALAR  (A9MRA6    ), TYPH_SALCH  (Q57G40    ), 
TYPH_SALDC  (B5FTC6    ), TYPH_SALEP  (B5R2J7    ), TYPH_SALG2  (B5R9V0    ), 
TYPH_SALHS  (B4TH00    ), TYPH_SALNS  (B4T4H1    ), TYPH_SALPA  (Q5PK22    ), 
TYPH_SALPK  (B5BAJ8    ), TYPH_SALSV  (B4TU42    ), TYPH_SALTI  (Q8XF46    ), 
TYPH_SALTY  (Q7CP66    ), TYPH_SERP5  (A8G9H7    ), TYPH_SHEAM  (A1S475    ), 
TYPH_SHEB2  (B8E6P5    ), TYPH_SHEB5  (A3D7J3    ), TYPH_SHEB8  (A6WRB7    ), 
TYPH_SHEB9  (A9KZ79    ), TYPH_SHEDO  (Q12QG2    ), TYPH_SHEFN  (Q086F9    ), 
TYPH_SHEHH  (B0TQ90    ), TYPH_SHELP  (A3QGT2    ), TYPH_SHEON  (Q8EHK3    ), 
TYPH_SHEPA  (A8H727    ), TYPH_SHEPC  (A4Y9A7    ), TYPH_SHEPW  (B8CKI5    ), 
TYPH_SHESA  (A0KU08    ), TYPH_SHESH  (A8FYQ8    ), TYPH_SHESM  (Q0HLE9    ), 
TYPH_SHESR  (Q0HXQ3    ), TYPH_SHESW  (A1RH88    ), TYPH_SHEWM  (B1KRP7    ), 
TYPH_SHIB3  (B2TZR5    ), TYPH_SHIBS  (Q31SV7    ), TYPH_SHIDS  (Q327L4    ), 
TYPH_SHIF8  (Q0SX29    ), TYPH_SHIFL  (Q83P01    ), TYPH_SHISS  (Q3YU11    ), 
TYPH_SINFN  (C3MBH0    ), TYPH_SINMW  (A6UET3    ), TYPH_SODGM  (Q2NW05    ), 
TYPH_SPHAL  (Q1GQ92    ), TYPH_TOLAT  (C4LAA1    ), TYPH_VIBCH  (Q9KPL8    ), 
TYPH_VIBF1  (Q5E7J6    ), TYPH_VIBFM  (B5FA99    ), TYPH_VIBPA  (Q87M23    ), 
TYPH_VIBVU  (Q8DBT1    ), TYPH_VIBVY  (Q7MI39    ), TYPH_YERE8  (A1JJ98    ), 
TYPH_YERP3  (A7FMH4    ), TYPH_YERPE  (Q74PY8    ), TYPH_YERPS  (Q66EV9    ), 
TYPH_YERPY  (B1JL36    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

AMPPA_METAR (Q0W5A8    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TYPH_LACRH  (P19663    ), TYPH_MYCHO  (P43050    )

		
PDB
[Detailed view]
20 PDB

1AZY; 1BRW; 1OTP; 1TPT; 1UOU; 2J0F; 2TPT; 2WK5; 2WK6; 3H5Q; 4EAD; 4EAF; 4GA4; 4GA5; 4GA6; 4LHM; 4X46; 4XR5; 4YEK; 4YYY
» more

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