Entry: PS00647

General information about the entry

Entry name [info] THYMID_PHOSPHORYLASE
Accession [info] PS00647
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00557

Name and characterization of the entry

Description [info] Thymidine and pyrimidine-nucleoside phosphorylases signature.
Pattern [info]
[SA]-[GS]-R-[GA]-[LIV]-x(2)-[TAP]-[GAS]-G-T-x-D-x-[LIVMF]-[EDS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 181 in 181 different sequences
Number of true positive hits 181 in 181 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.45 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
181 sequences

AMPP1_ARCFU (O28928), AMPP2_ARCFU (O28927), AMPPA_HYPBU (A2BJU0), 
AMPPA_META3 (A6UUN0), AMPPA_METAC (Q8TL01), AMPPA_METB6 (A7I5N0), 
AMPPA_METBF (Q466X0), AMPPA_METBU (Q12Z64), AMPPA_METHJ (Q2FTS5), 
AMPPA_METJA (Q58081), AMPPA_METLZ (A2SPI9), AMPPA_METM5 (A4FZL0), 
AMPPA_METM6 (A9A6M7), AMPPA_METM7 (A6VIW6), AMPPA_METMA (Q8Q0P9), 
AMPPA_METMJ (A3CSY4), AMPPA_METMP (Q6M0E4), AMPPA_METTP (A0B6C9), 
AMPPA_METVS (A6URW3), AMPPA_NATPD (Q3IP82), AMPPA_PYRAB (Q9V163), 
AMPPA_PYRFU (Q8U0I2), AMPPA_PYRHO (O59251), AMPPA_THEGJ (C5A1L9), 
AMPPA_THEKO (Q5JCX3), AMPPA_THEON (B6YWT7), AMPPA_THEPD (A1RWC3), 
AMPPA_THESM (C6A2A0), PDP_BACSU   (P39142), PDP_GEOSE   (P77836), 
PDP_STAA3   (Q2FEZ3), PDP_STAA8   (Q2FWC1), PDP_STAAB   (Q2YUL7), 
PDP_STAAC   (Q5HE64), PDP_STAAM   (Q99SC3), PDP_STAAN   (Q7A4D0), 
PDP_STAAR   (Q6GET9), PDP_STAAS   (Q6G7H4), PDP_STAAW   (Q8NVF6), 
PDP_STAEQ   (Q5HM85), PDP_STAES   (Q8CNH8), PDP_STAHJ   (Q4L818), 
RBKTP_AZOC5 (A8IA58), RBKTP_CUPNH (Q0K3R9), RBKTP_CUPPJ (Q46UT0), 
RBKTP_CUPTR (B2AIF3), RBKTP_ROSDO (Q16A32), TYPH1_ACISJ (A1W631), 
TYPH1_CUPNH (Q0KA59), TYPH2_ACISJ (A1W9B0), TYPH2_CUPPJ (Q46S32), 
TYPH_AERHH  (A0KPE3), TYPH_AERS4  (A4SRU3), TYPH_AGRFC  (Q8UJ08), 
TYPH_ALISL  (B6ENG4), TYPH_BRADU  (Q89QK7), TYPH_BRASB  (A5EG87), 
TYPH_BRASO  (A4YRL1), TYPH_BURCA  (Q1BV59), TYPH_BURCC  (B1KC83), 
TYPH_BURCH  (A0KCQ9), TYPH_BURCJ  (B4EPB7), TYPH_BURL3  (Q39PA6), 
TYPH_BURM7  (A3MAQ6), TYPH_BURMA  (Q62EC5), TYPH_BURMS  (A1UY21), 
TYPH_BURP0  (A3P8N2), TYPH_BURP6  (A3NN77), TYPH_BURPS  (Q63IV6), 
TYPH_CHESB  (Q11BH8), TYPH_CHRVO  (Q7NRT0), TYPH_COLP3  (Q483R6), 
TYPH_CROS8  (A7MGA9), TYPH_ECO24  (A7ZVS5), TYPH_ECO27  (B7UR10), 
TYPH_ECO45  (B7MNI9), TYPH_ECO55  (B7LEM8), TYPH_ECO57  (Q8XB35), 
TYPH_ECO5E  (B5Z4R4), TYPH_ECO7I  (B7NW62), TYPH_ECO81  (B7MTC8), 
TYPH_ECO8A  (B7LXU4), TYPH_ECODH  (B1XFJ2), TYPH_ECOHS  (A8A8B1), 
TYPH_ECOL6  (Q8FA52), TYPH_ECOLC  (B1IS37), TYPH_ECOLI  (P07650), 
TYPH_ECOLU  (B7NH50), TYPH_ECOSE  (B6I6M9), TYPH_ECOSM  (B1LEI7), 
TYPH_ENT38  (A4W699), TYPH_ERWT9  (B2VH51), TYPH_ESCF3  (B7LNS2), 
TYPH_HAHCH  (Q2SLV0), TYPH_HUMAN  (P19971), TYPH_IDILO  (Q5QXT8), 
TYPH_KLEP3  (B5Y276), TYPH_KLEP7  (A6THZ7), TYPH_LEGPA  (Q5X2M8), 
TYPH_LEGPC  (A5IFN1), TYPH_LEGPH  (Q5ZWR3), TYPH_LEGPN  (Q8RNP4), 
TYPH_MARMM  (Q0ATA0), TYPH_METCA  (Q607P2), TYPH_MYCGE  (P47297), 
TYPH_MYCPI  (P47717), TYPH_MYCPN  (P75052), TYPH_MYCTO  (P9WFS0), 
TYPH_MYCTU  (P9WFS1), TYPH_NITHX  (Q1QM39), TYPH_PARL1  (A7HYS8), 
TYPH_PECAS  (Q6D991), TYPH_PHOPR  (Q6LUH3), TYPH_POLSJ  (Q12E97), 
TYPH_PROMH  (B4EWA3), TYPH_PSEU5  (A4VHV6), TYPH_PSYIN  (A1SYK5), 
TYPH_RALSO  (Q8Y2X7), TYPH_RHILO  (Q98GV5), TYPH_RHIME  (Q92T50), 
TYPH_RHISN  (C3MBH0), TYPH_RHOFT  (Q21W90), TYPH_RHOP5  (Q07J10), 
TYPH_RHOPA  (Q6N2A3), TYPH_RHOPB  (Q20Z21), TYPH_RHOPS  (Q13B59), 
TYPH_RHOPT  (B3QKL9), TYPH_SALA4  (B5F525), TYPH_SALAR  (A9MRA6), 
TYPH_SALCH  (Q57G40), TYPH_SALDC  (B5FTC6), TYPH_SALEP  (B5R2J7), 
TYPH_SALG2  (B5R9V0), TYPH_SALHS  (B4TH00), TYPH_SALNS  (B4T4H1), 
TYPH_SALPA  (Q5PK22), TYPH_SALPK  (B5BAJ8), TYPH_SALSV  (B4TU42), 
TYPH_SALTI  (Q8XF46), TYPH_SALTY  (Q7CP66), TYPH_SERP5  (A8G9H7), 
TYPH_SHEAM  (A1S475), TYPH_SHEB2  (B8E6P5), TYPH_SHEB5  (A3D7J3), 
TYPH_SHEB8  (A6WRB7), TYPH_SHEB9  (A9KZ79), TYPH_SHEDO  (Q12QG2), 
TYPH_SHEFN  (Q086F9), TYPH_SHEHH  (B0TQ90), TYPH_SHELP  (A3QGT2), 
TYPH_SHEON  (Q8EHK3), TYPH_SHEPA  (A8H727), TYPH_SHEPC  (A4Y9A7), 
TYPH_SHEPW  (B8CKI5), TYPH_SHESA  (A0KU08), TYPH_SHESH  (A8FYQ8), 
TYPH_SHESM  (Q0HLE9), TYPH_SHESR  (Q0HXQ3), TYPH_SHESW  (A1RH88), 
TYPH_SHEWM  (B1KRP7), TYPH_SHIB3  (B2TZR5), TYPH_SHIBS  (Q31SV7), 
TYPH_SHIDS  (Q327L4), TYPH_SHIF8  (Q0SX29), TYPH_SHIFL  (Q83P01), 
TYPH_SHISS  (Q3YU11), TYPH_SINMW  (A6UET3), TYPH_SODGM  (Q2NW05), 
TYPH_SPHAL  (Q1GQ92), TYPH_TOLAT  (C4LAA1), TYPH_VIBCH  (Q9KPL8), 
TYPH_VIBF1  (Q5E7J6), TYPH_VIBFM  (B5FA99), TYPH_VIBPA  (Q87M23), 
TYPH_VIBVU  (Q8DBT1), TYPH_VIBVY  (Q7MI39), TYPH_YERE8  (A1JJ98), 
TYPH_YERP3  (A7FMH4), TYPH_YERPE  (Q74PY8), TYPH_YERPS  (Q66EV9), 
TYPH_YERPY  (B1JL36)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

AMPPA_METAR (Q0W5A8)

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TYPH_LACRH  (P19663), TYPH_MYCHO  (P43050)

		
PDB
[Detailed view]
16 PDB

1AZY; 1BRW; 1OTP; 1TPT; 1UOU; 2J0F; 2TPT; 2WK5; 2WK6; 3H5Q; 4EAD; 4EAF; 4GA4; 4GA5; 4GA6; 4LHM
» More

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