Entry: PS00663

General information about the entry

Entry name [info] VINCULIN_1
Accession [info] PS00663
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); JUN-1994 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00568

Name and characterization of the entry

Description [info] Vinculin family talin-binding region signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 17 in 17 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.91 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
17 sequences

CTNA1_BOVIN (Q3MHM6), CTNA1_HUMAN (P35221), CTNA1_MOUSE (P26231), 
CTNA1_RABIT (Q59I72), CTNA2_CHICK (P30997), CTNA2_HUMAN (P26232), 
CTNA2_XENTR (A4IGI7), CTNA_DROME  (P35220), VINC_CAEEL  (P19826), 
VINC_CHICK  (P12003), VINC_HUMAN  (P18206), VINC_MOUSE  (Q64727), 
VINC_PIG    (P26234), VINC_RAT    (P85972)
» more

False negative sequences
6 sequences

VINC_BRUMA  (Q17162), VINC_DICDI  (Q54MH2), VINC_DROME  (O46037)
» more

'Partial' sequences
1 sequence

VINC_XENLA  (Q04615)

[Detailed view]
30 PDB

1DOV; 1DOW; 1RKC; 1RKE; 1ST6; 1SYQ; 1T01; 1U6H; 1XWJ; 1YDI; 1ZVZ; 1ZW2; 1ZW3; 2GDC; 2GWW; 2HSQ; 2IBF; 3RF3; 3S90; 3TJ5; 3TJ6; 3ZDL; 4DJ9; 4E17; 4E18; 4EHP; 4IGG; 4K1N; 4ONS; 4P9T
» more

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