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Entry: PS00663

General information about the entry

Entry name [info] VINCULIN_1
Accession [info] PS00663
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED; 01-JUN-1994 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00568

Name and characterization of the entry

Description [info] Vinculin family talin-binding region signature.
Pattern [info]
[KR]-x-[LIVMF]-x(3)-[LIVMA]-x(2)-[LIVM]-x(6)-R-Q-Q-E-L.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 17 in 17 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.91 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
17 sequences

CTNA1_BOVIN (Q3MHM6    ), CTNA1_HUMAN (P35221    ), CTNA1_MOUSE (P26231    ), 
CTNA1_RABIT (Q59I72    ), CTNA2_CHICK (P30997    ), CTNA2_HUMAN (P26232    ), 
CTNA2_MOUSE (Q61301    ), CTNA2_PONAB (Q5R416    ), CTNA2_XENLA (Q6GLP0    ), 
CTNA2_XENTR (A4IGI7    ), CTNA_DROME  (P35220    ), VINC_CAEEL  (P19826    ), 
VINC_CHICK  (P12003    ), VINC_HUMAN  (P18206    ), VINC_MOUSE  (Q64727    ), 
VINC_PIG    (P26234    ), VINC_RAT    (P85972    )
» more

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

CTNA2_DANRE (B7ZC77    ), CTNA3_HUMAN (Q9UI47    ), CTNA3_MOUSE (Q65CL1    ), 
VINC_BRUMA  (Q17162    ), VINC_DICDI  (Q54MH2    ), VINC_DROME  (O46037    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

VINC_XENLA  (Q04615    )

		
PDB
[Detailed view]
30 PDB

1DOV; 1DOW; 1RKC; 1RKE; 1ST6; 1SYQ; 1T01; 1U6H; 1XWJ; 1YDI; 1ZVZ; 1ZW2; 1ZW3; 2GDC; 2GWW; 2HSQ; 2IBF; 3RF3; 3S90; 3TJ5; 3TJ6; 3ZDL; 4DJ9; 4E17; 4E18; 4EHP; 4IGG; 4K1N; 4ONS; 4P9T
» more

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