Entry: PS00663

General information about the entry

Entry name [info] VINCULIN_1
Accession [info] PS00663
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); JUN-1994 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00568

Name and characterization of the entry

Description [info] Vinculin family talin-binding region signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.

Total number of hits 17 in 17 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.91 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
17 sequences

CTNA1_BOVIN (Q3MHM6), CTNA1_HUMAN (P35221), CTNA1_MOUSE (P26231), 
CTNA1_RABIT (Q59I72), CTNA2_CHICK (P30997), CTNA2_HUMAN (P26232), 
CTNA2_XENTR (A4IGI7), CTNA_DROME  (P35220), VINC_CAEEL  (P19826), 
VINC_CHICK  (P12003), VINC_HUMAN  (P18206), VINC_MOUSE  (Q64727), 
VINC_PIG    (P26234), VINC_RAT    (P85972)
» More

False negative sequences
6 sequences

VINC_BRUMA  (Q17162), VINC_DICDI  (Q54MH2), VINC_DROME  (O46037)
» More

'Partial' sequences
1 sequence

VINC_XENLA  (Q04615)

[Detailed view]
29 PDB

1DOV; 1DOW; 1RKC; 1RKE; 1ST6; 1SYQ; 1T01; 1U6H; 1XWJ; 1YDI; 1ZVZ; 1ZW2; 1ZW3; 2GDC; 2GWW; 2HSQ; 2IBF; 3RF3; 3S90; 3TJ5; 3TJ6; 3ZDL; 4DJ9; 4E17; 4E18; 4EHP; 4IGG; 4K1N; 4ONS
» More

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