Entry: PS00683

General information about the entry

Entry name [info] RHODANESE_2
Accession [info] PS00683
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); JUL-1999 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00322

Name and characterization of the entry

Description [info] Rhodanese C-terminal signature.
Pattern [info]
[AV]-x(2)-[FY]-[DEAP]-G-[GSA]-[WF]-x-E-[FYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 36 in 36 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 26
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.44 %
Recall (true positives / (true positives + false negatives)) 56.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

STR1_ARATH  (O64530    ), STR2_ARATH  (Q24JL3    ), THT2_MYCBO  (Q7TWT6    ), 
THT2_MYCLE  (P46700    ), THT2_MYCTO  (P9WHF6    ), THT2_MYCTU  (P9WHF7    ), 
THT3_MYCTO  (P9WHF4    ), THT3_MYCTU  (P9WHF5    ), THTM_ECO57  (P58388    ), 
THTM_ECOLI  (P31142    ), THTM_HUMAN  (P25325    ), THTM_MOUSE  (Q99J99    ), 
THTM_RAT    (P97532    ), THTR1_MYCBO (P59989    ), THTR_AZOVI  (P52197    ), 
THTR_BOVIN  (P00586    ), THTR_CHICK  (P25324    ), THTR_CORGL  (P71121    ), 
THTR_CRIGR  (P46635    ), THTR_DEIRA  (Q9RXT9    ), THTR_HALVD  (D4GYM0    ), 
THTR_HUMAN  (Q16762    ), THTR_METTH  (O26719    ), THTR_MOUSE  (P52196    ), 
THTR_MYCLE  (Q50036    ), THTR_MYCS2  (A0R4C9    ), THTR_MYCTO  (P9WHF8    ), 
THTR_MYCTU  (P9WHF9    ), THTR_RAT    (P24329    ), THTR_SACER  (P16385    ), 
THTR_SYNE7  (P27477    ), THTR_YEAST  (Q08686    ), TSTD3_MOUSE (Q9D0B5    ), 
YNJE_ECOLI  (P78067    )
» more

UniProtKB/Swiss-Prot
False negative sequences
26 sequences

ACR21_ORYSJ (Q336V5    ), ACR22_ORYSJ (Q10SX6    ), CAS_ARATH   (Q9FN48    ), 
CDC25_ARATH (Q8GY31    ), MOCS3_ARATH (Q9ZNW0    ), STR10_ARATH (Q9SR92    ), 
STR11_ARATH (Q0WWT7    ), STR12_ARATH (Q93WI0    ), STR14_ARATH (Q94A65    ), 
STR15_ARATH (Q38853    ), STR16_ARATH (Q39129    ), STR17_ARATH (F4IPI4    ), 
STR18_ARATH (Q9FKW8    ), STR19_ARATH (Q8RUD6    ), STR4A_ARATH (Q56XR7    ), 
STR4_ARATH  (Q9M158    ), STR6_ARATH  (Q94AC1    ), STR7_ARATH  (Q1JPN0    ), 
STR8_ARATH  (F4I933    ), STR9_ARATH  (O48529    ), THT1_CAEEL  (P91247    ), 
THT2_CAEEL  (O17730    ), THTM_PSEAE  (Q9I452    ), THTM_SCHPO  (Q9USJ1    ), 
THTR2_MYCBO (Q7TX80    ), YTWF_BACSU  (O32072    )
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

FGD_MYCTO   (P9WNE0    ), FGD_MYCTU   (P9WNE1    )

		
PDB
[Detailed view]
22 PDB

1BOH; 1BOI; 1DP2; 1E0C; 1H4K; 1H4M; 1ORB; 1RHD; 1RHS; 1URH; 2ORA; 2WLR; 2WLX; 3AAX; 3AAY; 3HWI; 3HZU; 3IPO; 3IPP; 3OLH; 3UTN; 4JGT
» more

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