Entry: PS00683

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General information about the entry

Entry name [info] RHODANESE_2
Accession [info] PS00683
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); JUL-1999 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00322

Name and characterization of the entry

Description [info] Rhodanese C-terminal signature.
Pattern [info]
[AV]-x(2)-[FY]-[DEAP]-G-[GSA]-[WF]-x-E-[FYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 36 in 36 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 26
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.44 %
Recall (true positives / (true positives + false negatives)) 56.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

STR1_ARATH  (O64530), STR2_ARATH  (Q24JL3), THT2_MYCBO  (Q7TWT6), 
THT2_MYCLE  (P46700), THT2_MYCTO  (P9WHF6), THT2_MYCTU  (P9WHF7), 
THT3_MYCTO  (P9WHF4), THT3_MYCTU  (P9WHF5), THTM_ECO57  (P58388), 
THTM_ECOLI  (P31142), THTM_HUMAN  (P25325), THTM_MOUSE  (Q99J99), 
THTM_RAT    (P97532), THTR1_MYCBO (P59989), THTR_AZOVI  (P52197), 
THTR_BOVIN  (P00586), THTR_CHICK  (P25324), THTR_CORGL  (P71121), 
THTR_CRIGR  (P46635), THTR_DEIRA  (Q9RXT9), THTR_HALVD  (D4GYM0), 
THTR_HUMAN  (Q16762), THTR_METTH  (O26719), THTR_MOUSE  (P52196), 
THTR_MYCLE  (Q50036), THTR_MYCS2  (A0R4C9), THTR_MYCTO  (P9WHF8), 
THTR_MYCTU  (P9WHF9), THTR_RAT    (P24329), THTR_SACER  (P16385), 
THTR_SYNE7  (P27477), THTR_YEAST  (Q08686), TSTD3_MOUSE (Q9D0B5), 
YNJE_ECOLI  (P78067)
» More

UniProtKB/Swiss-Prot
False negative sequences
26 sequences

ACR21_ORYSJ (Q336V5), ACR22_ORYSJ (Q10SX6), CAS_ARATH   (Q9FN48), 
CDC25_ARATH (Q8GY31), MOCS3_ARATH (Q9ZNW0), STR10_ARATH (Q9SR92), 
STR11_ARATH (Q0WWT7), STR12_ARATH (Q93WI0), STR14_ARATH (Q94A65), 
STR15_ARATH (Q38853), STR16_ARATH (Q39129), STR17_ARATH (F4IPI4), 
STR18_ARATH (Q9FKW8), STR19_ARATH (Q8RUD6), STR4A_ARATH (Q56XR7), 
STR4_ARATH  (Q9M158), STR6_ARATH  (Q94AC1), STR7_ARATH  (Q1JPN0), 
STR8_ARATH  (F4I933), STR9_ARATH  (O48529), THT1_CAEEL  (P91247), 
THT2_CAEEL  (O17730), THTM_PSEAE  (Q9I452), THTM_SCHPO  (Q9USJ1), 
THTR2_MYCBO (Q7TX80), YTWF_BACSU  (O32072)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

FGD_MYCTO   (P9WNE0), FGD_MYCTU   (P9WNE1)

		
PDB
[Detailed view]
22 PDB

1BOH; 1BOI; 1DP2; 1E0C; 1H4K; 1H4M; 1ORB; 1RHD; 1RHS; 1URH; 2ORA; 2WLR; 2WLX; 3AAX; 3AAY; 3HWI; 3HZU; 3IPO; 3IPP; 3OLH; 3UTN; 4JGT
» More

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