Entry: PS00684

General information about the entry
Entry name SASP_2
Accession number PS00684
Entry type PATTERN
Date JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00276
Name and characterization of the entry
DescriptionSmall, acid-soluble spore proteins, alpha/beta type, signature 2.
Pattern [KRC]-[SAQ]-x-G-x-[VF]-G-[GA]-x-[LIVM]-x-[KR]-[KRC]-[LIVM](2).
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 28 hits in 28 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 28 hits in 28 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 84.85 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
SAS0_CLOPE  (P41371), SAS1_BACCE  (P0A4F3), SAS1_BACCR  (P0A4F2), 
SAS1_BACIU  (P84583), SAS1_BACME  (P10570), SAS1_CLOBI  (P22065), 
SAS1_CLOPE  (P21886), SAS1_GEOSE  (P06552), SAS1_HALH3  (Q00213), 
SAS1_SPOUR  (P52968), SAS1_THETP  (P06553), SAS2_BACCE  (P0A4F5), 
SAS2_BACCR  (P0A4F4), SAS2_BACIU  (P84584), SAS2_BACME  (P10571), 
SAS2_CLOBI  (P22066), SAS2_CLOPE  (P21887), SAS2_SPOUR  (P52969), 
SAS3_BACME  (P10572), SAS4_BACME  (P04834), SAS5_BACME  (P04835), 
SASA_BACME  (P02959), SASC_BACME  (P02960), SSPA_BACSU  (P04831), 
SSPB_BACSU  (P04832), SSPC_BACSU  (P02958), SSPD_BACSU  (P04833), 
SSPS_STRPY  (P29840)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
SSPF_BACCE  (P0A4F7), SSPF_BACCR  (P0A4F6), SSPF_BACMQ  (P52971), 
SSPF_BACSU  (P37549), SSPM_MYCPH  (P81390)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2Z3X;

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