Entry: PS00689

General information about the entry

Entry name [info] GLYCO_HORMONE_BETA_2
Accession [info] PS00689
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00234

Name and characterization of the entry

Description [info] Glycoprotein hormones beta chain signature 2.
Pattern [info]
[PA]-V-A-x(2)-C-x-C-x(2)-C-x(4)-[STDAI]-[DEY]-C-x(6,8)-[PGSTAVMI]-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 108 in 108 different sequences
Number of true positive hits 108 in 108 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.30 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 5
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 13
Site [info] disulfide at position 17
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
108 sequences

CGB1_HUMAN  (A6NKQ9    ), CGB2_HUMAN  (Q6NT52    ), CGB3_HUMAN  (P0DN86    ), 
CGB7_HUMAN  (P0DN87    ), CGHB_AOTNA  (Q3HRV3    ), CGHB_CALJA  (P51500    ), 
CGHB_PAPAN  (P07434    ), FSHB_AILME  (Q8WN19    ), FSHB_AOTNA  (Q3HRV4    ), 
FSHB_BOVIN  (P04837    ), FSHB_BUBBU  (Q6SV86    ), FSHB_CAPHI  (Q8HY83    ), 
FSHB_CAVPO  (Q9JK69    ), FSHB_CERNI  (Q8HY84    ), FSHB_GORGO  (A1BN60    ), 
FSHB_HORSE  (P01226    ), FSHB_HUMAN  (P01225    ), FSHB_LITCT  (Q9PS36    ), 
FSHB_MACFA  (Q6EV79    ), FSHB_MASCO  (Q6SI68    ), FSHB_MERUN  (Q6U830    ), 
FSHB_MONDO  (Q95J82    ), FSHB_MOUSE  (Q60687    ), FSHB_PANTA  (Q9BDJ0    ), 
FSHB_PANTR  (Q2PUH2    ), FSHB_PHOSU  (Q9QYB0    ), FSHB_PIG    (P01228    ), 
FSHB_PONPY  (A1BN61    ), FSHB_RABIT  (Q6IY73    ), FSHB_RAT    (P18427    ), 
FSHB_SAIBB  (Q3YC02    ), FSHB_SHEEP  (P01227    ), FSHB_STRCA  (P80663    ), 
FSHB_TRIVU  (O46430    ), GTHB1_ANGJA (Q9YGK3    ), GTHB1_CARAU (Q98848    ), 
GTHB1_CORAU (P48250    ), GTHB1_CYPCA (O13050    ), GTHB1_FUNHE (P30971    ), 
GTHB1_ICTPU (Q9DG81    ), GTHB1_MORSA (Q91120    ), GTHB1_ONCKE (P10257    ), 
GTHB1_ONCMA (P48252    ), GTHB1_THUOB (P37205    ), GTHB1_TRITC (Q9PW99    ), 
GTHB2_ACALA (Q90225    ), GTHB2_ANGAN (P27767    ), GTHB2_CARAU (Q98849    ), 
GTHB2_CLAGA (P53543    ), GTHB2_CLUPA (Q9YGH2    ), GTHB2_CORAU (P48251    ), 
GTHB2_CTEID (P30984    ), GTHB2_CYPCA (P01235    ), GTHB2_FUNHE (P30972    ), 
GTHB2_HYPMO (P37038    ), GTHB2_ICTPU (Q9DG80    ), GTHB2_MORSA (Q91121    ), 
GTHB2_ONCKE (P10256    ), GTHB2_ONCMA (P48253    ), GTHB2_ONCTS (P07732    ), 
GTHB2_THUOB (P37206    ), GTHB2_TRITC (Q9PW98    ), GTHB_MURCI  (P12837    ), 
LSHB_AILFU  (Q8HZR9    ), LSHB_AILME  (Q8WN18    ), LSHB_BALAC  (P33088    ), 
LSHB_BOVIN  (P04651    ), LSHB_CANLF  (P18842    ), LSHB_CERSI  (O77835    ), 
LSHB_COTJA  (P45657    ), LSHB_EQUAS  (P19794    ), LSHB_EQUBU  (O46641    ), 
LSHB_FELCA  (O77805    ), LSHB_GORGO  (Q2Q1P1    ), LSHB_HORSE  (P08751    ), 
LSHB_HUMAN  (P01229    ), LSHB_LITCT  (P80071    ), LSHB_MACFA  (Q6EV78    ), 
LSHB_MACRU  (O46483    ), LSHB_MELGA  (P45646    ), LSHB_MONDO  (Q95J85    ), 
LSHB_MOUSE  (O09108    ), LSHB_PANTA  (Q9BDI9    ), LSHB_PANTR  (Q2Q1P2    ), 
LSHB_PHYCD  (P25330    ), LSHB_PIG    (P01232    ), LSHB_PONPY  (Q2Q1P0    ), 
LSHB_RABIT  (Q6IY74    ), LSHB_RAT    (P01230    ), LSHB_SHEEP  (P01231    ), 
LSHB_STRCA  (P80664    ), LSHB_TRIVU  (O46482    ), TSHB_ANGAN  (Q08127    ), 
TSHB_ANGJA  (Q7ZZV4    ), TSHB_BOVIN  (P01223    ), TSHB_CANLF  (P54828    ), 
TSHB_CHICK  (O57340    ), TSHB_FELCA  (Q52R90    ), TSHB_HORSE  (Q28376    ), 
TSHB_HUMAN  (P01222    ), TSHB_LAMGL  (P79357    ), TSHB_MONDO  (Q95J88    ), 
TSHB_MOUSE  (P12656    ), TSHB_ONCMY  (P37240    ), TSHB_PHOSU  (Q62590    ), 
TSHB_PIG    (P01224    ), TSHB_RAT    (P04652    ), TSHB_SALSA  (O73824    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CGHB_SAIBB  (Q3S2X5    ), GPHB5_HUMAN (Q86YW7    ), GPHB5_MOUSE (Q812B2    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

LSHB_PHOSU  (Q9QYA9    )

		
PDB
[Detailed view]
7 PDB

1FL7; 1HCN; 1HRP; 1QFW; 1XWD; 4AY9; 4MQW

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