Entry: PS00691

General information about the entry

Entry name [info] DNA_PHOTOLYASES_1_2
Accession [info] PS00691
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00331

Name and characterization of the entry

Description [info] DNA photolyases class 1 signature 2.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 17 in 17 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
17 sequences

CRY1_ARATH  (Q43125), CRY1_SINAL  (P40115), CRY2_ARATH  (Q96524), 
PHRA_AGRT5  (A9CJC9), PHR_BACPE   (Q04449), PHR_BUCAI   (P57386), 
PHR_BUCBP   (Q89AJ9), PHR_ECOLI   (P00914), PHR_HALSA   (Q9HQ46), 
PHR_NEUCR   (P27526), PHR_SALTY   (P25078), PHR_STRGR   (P12768), 
PHR_SYNY3   (Q55081), PHR_THET2   (P61496), PHR_THET8   (P61497), 
PHR_VIBCH   (Q9KNA8), PHR_YEAST   (P05066)
» More

False negative sequences
3 sequences

PHR_SYNP6   (P05327), UVR3_ARATH  (O48652), UVR3_ORYSJ  (Q0E2Y1)

[Detailed view]
15 PDB

1DNP; 1IQR; 1IQU; 1OWL; 1OWM; 1OWN; 1OWO; 1OWP; 1QNF; 1TEZ; 1U3C; 1U3D; 2J07; 2J08; 2J09
» More

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