Entry: PS00700

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General information about the entry

Entry name [info] RIBOSOMAL_L6_2
Accession [info] PS00700
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00454

Name and characterization of the entry

Description [info] Ribosomal protein L6 signature 2.
Pattern [info]
[QLS]-x(3)-[LIVM]-x(2)-[KRWYF]-x(2)-R-x-F-x-D-G-[LIVM]-[YF]-[LIVM]-x(2)-
[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 9
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

RL6_AERPE   (Q9YF91), RL6_ARCFU   (O28370), RL6_HALMA   (P14135), 
RL6_HALSA   (Q9HPB8), RL6_HALWD   (Q18GG5), RL6_HYPBU   (A2BMD5), 
RL6_IGNH4   (A8AC04), RL6_META3   (A6UWV4), RL6_METAC   (Q8TRT1), 
RL6_METBF   (Q46GB1), RL6_METBU   (Q12ZT5), RL6_METJA   (P54042), 
RL6_METKA   (Q8TW14), RL6_METM5   (A4FWA5), RL6_METM6   (A9A9P8), 
RL6_METM7   (A6VH01), RL6_METMA   (Q8PV34), RL6_METMP   (Q6LXD7), 
RL6_METS3   (A5UL72), RL6_METST   (Q2NFX3), RL6_METTH   (O26127), 
RL6_METTP   (A0B9V4), RL6_METVA   (P14030), RL6_METVS   (A6UQ60), 
RL6_PYRAB   (Q9V1V1), RL6_PYRFU   (Q8U015), RL6_PYRHO   (O59433), 
RL6_SULAC   (O05637), RL6_SULSO   (Q9UX91), RL6_SULTO   (Q975J6), 
RL6_THEGJ   (C5A269), RL6_THEKO   (Q5JJG4), RL6_THEON   (B6YSN0), 
RL6_UNCMA   (Q0W1X2), RL91_ARATH  (P49209), RL92_ARATH  (Q9SZX9), 
RL9A_SCHPO  (Q10232), RL9A_YEAST  (P05738), RL9B_SCHPO  (O74905), 
RL9B_YEAST  (P51401), RL9_BOVIN   (Q3SYR7), RL9_CAEEL   (Q95Y90), 
RL9_DICDI   (Q54XI5), RL9_DROME   (P50882), RL9_HUMAN   (P32969), 
RL9_ICTPU   (Q90YW0), RL9_MACFA   (Q5IFJ7), RL9_MOUSE   (P51410), 
RL9_ORYSJ   (P49210), RL9_PEA     (P30707), RL9_PONAB   (Q5R9Q7), 
RL9_RAT     (P17077), RL9_SPOFR   (Q963B7), RL9_TETTS   (Q22AX5)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

RL6_DESK1   (B8D5V4), RL6_METHJ   (Q2FSG5), RL6_NANEQ   (Q74MR6), 
RL6_NATPD   (Q3IMX2), RL6_PICTO   (Q6L1B1), RL6_PYRAE   (Q8ZVA7), 
RL6_STAMF   (A3DNC3), RL6_THEAC   (Q9HIS3), RL6_THEVO   (Q97BW0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

RL9_HAECO   (O02376)

		
PDB
[Detailed view]
88 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S1I; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3IZS; 3J16; 3J21; 3J39; 3J3B; 3J44; 3J65; 3O58; 3O5H; 3OW2; 3U5E; 3U5I; 4A17; 4A1A; 4A1C; 4A1E; 4ADX; 4B6A; 4BYN; 4BYU; 4CUW; 4HUB
» More

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