PROSITE logo

PROSITE entry PS00700


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L6_2
Accession [info] PS00700
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00454

Name and characterization of the entry

Description [info] Ribosomal protein L6 signature 2.
Pattern [info] 
[QLS]-x(3)-[LIVM]-x(2)-[KRWYF]-x(2)-R-x-F-x-D-G-[LIVM]-[YF]-[LIVM]-x(2)-
[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 56 in 56 different sequences
Number of true positive hits 56 in 56 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 56 sequences 

RL6_AERPE   (Q9YF91), RL6_ARCFU   (O28370), RL6_HALMA   (P14135), 

RL6_HALSA   (Q9HPB8), RL6_HALWD   (Q18GG5), RL6_HYPBU   (A2BMD5), 
RL6_IGNH4   (A8AC04), RL6_META3   (A6UWV4), RL6_METAC   (Q8TRT1), 
RL6_METAR   (Q0W1X2), RL6_METBF   (Q46GB1), RL6_METBU   (Q12ZT5), 
RL6_METJA   (P54042), RL6_METKA   (Q8TW14), RL6_METM5   (A4FWA5), 
RL6_METM6   (A9A9P8), RL6_METM7   (A6VH01), RL6_METMA   (Q8PV34), 
RL6_METMP   (Q6LXD7), RL6_METS3   (A5UL72), RL6_METST   (Q2NFX3), 
RL6_METTH   (O26127), RL6_METTP   (A0B9V4), RL6_METVA   (P14030), 
RL6_METVS   (A6UQ60), RL6_PYRAB   (Q9V1V1), RL6_PYRFU   (Q8U015), 
RL6_PYRHO   (O59433), RL6_SACS2   (Q9UX91), RL6_SULAC   (O05637), 
RL6_SULTO   (Q975J6), RL6_THEGJ   (C5A269), RL6_THEKO   (Q5JJG4), 
RL6_THEON   (B6YSN0), RL91_ARATH  (P49209), RL92_ARATH  (Q9SZX9), 
RL9A_SCHPO  (Q10232), RL9A_YEAST  (P05738), RL9B_CANAL  (Q5AEN2), 
RL9B_SCHPO  (O74905), RL9B_YEAST  (P51401), RL9_BOVIN   (Q3SYR7), 
RL9_CAEEL   (Q95Y90), RL9_DICDI   (Q54XI5), RL9_DROME   (P50882), 
RL9_HUMAN   (P32969), RL9_ICTPU   (Q90YW0), RL9_MACFA   (Q5IFJ7), 
RL9_MOUSE   (P51410), RL9_ORYSJ   (P49210), RL9_PEA (P30707), 
RL9_PONAB   (Q5R9Q7), RL9_RABIT   (G1SWI6), RL9_RAT (P17077), 
RL9_SPOFR   (Q963B7), RL9_TETTS   (Q22AX5)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL6_DESA1   (B8D5V4), RL6_METHJ   (Q2FSG5), RL6_NANEQ   (Q74MR6), 

RL6_NATPD   (Q3IMX2), RL6_PICTO   (Q6L1B1), RL6_PYRAE   (Q8ZVA7), 
RL6_STAMF   (A3DNC3), RL6_THEAC   (Q9HIS3), RL6_THEVO   (Q97BW0)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RL9_HAECO   (O02376)


				
	

	

		PDB
[Detailed view]		
		
			449 PDB
			


			1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 
			
				1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 
				1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 
				1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 
				3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 
				3G4S; 3G6E; 3G71; 3I55; 3I56; 3J16; 3J6X; 3J6Y; 3J77; 3J78; 3JAG; 3JAH; 
				3JAI; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 
				4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V4N; 
				4V6I; 4V6U; 4V6W; 4V6X; 4V7F; 4V7R; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 
				4V9F; 5AJ0; 5AN9; 5ANB; 5ANC; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 
				5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 
				5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 
				5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 
				6D90; 6D9J; 6ELZ; 6EM1; 6EM5; 6FT6; 6FTG; 6FTI; 6FTJ; 6GQ1; 6GQB; 6GQV; 
				6HCF; 6HCJ; 6HCM; 6HCQ; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 
				6LSS; 6LU8; 6M62; 6MTB; 6MTC; 6MTD; 6MTE; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 
				6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6P5I; 6P5J; 6P5K; 
				6P5N; 6Q8Y; 6QIK; 6QKL; 6QT0; 6QTZ; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 6R84; 
				6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SGC; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 
				6T4Q; 6T59; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6XU6; 
				6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 
				6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZVK; 7A01; 7AZY; 7B7D; 7BHP; 
				7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7N8B; 7NAC; 
				7NFX; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 7O81; 7OBR; 7OF1; 
				7OH3; 7OHP; 7OHQ; 7OHR; 7OHS; 7OHT; 7OHU; 7OHV; 7OHW; 7OHX; 7OHY; 7OSA; 
				7OSM; 7OW7; 7OYD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QVP; 7QWQ; 7QWR; 
				7QWS; 7R7A; 7RR5; 7TM3; 7TOO; 7TOP; 7TOQ; 7TOR; 7TUT; 7U0H; 7UCJ; 7UCK; 
				7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 
				7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 
				8B5L; 8B6C; 8BHF; 8BIP; 8BJQ; 8BPO; 8BQD; 8BQX; 8BTK; 8CCS; 8CDL; 8CDR; 
				8CKU; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUB; 8EUG; 8EUI; 8EUP; 
				8EUY; 8EV3; 8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8FKR; 8FKS; 8FKT; 
				8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL0; 8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 
				8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 
				8GLP; 8HFR; 8HKU; 8HKV; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 8HL5; 8IDT; 
				8IDY; 8IE3; 8IFD; 8IFE; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 8IR1; 8IR3; 
				8JDJ; 8JDK; 8JDL; 8JDM; 8OHD; 8OJ0; 8OJ5; 8OJ8; 8P2K; 8QFD; 8RJB; 8RJC; 
				8RJD; 8SCB; 8Y0U; 8Y0W; 8Y0X
			
			

			» more