Entry: PS00703

General information about the entry
Entry name OKR_DC_1
Accession number PS00703
Entry type PATTERN
Date DEC-1992 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00585
Name and characterization of the entry
DescriptionOrn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.
Pattern [STAV]-x-S-x-H-K-x(2)-[GSTAN](2)-x-[STA]-Q-[STA](2).
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 15 hits in 15 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 15 hits in 15 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 93.75 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 6,pyridoxal_phosphate
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ADIA_ECOLI  (P28629), DCLY_HAFAL  (P05033), DCLZ_ECOLI  (P52095), 
DCOR_ECOLI  (P21169), DCOR_HAEIN  (P44317), DCOR_LACS3  (P43099), 
DCOS_ECOLI  (P24169), LDCI_ECO57  (P0A9H4), LDCI_ECOLI  (P0A9H3), 
LDCI_SALTI  (P0A1Z1), LDCI_SALTY  (P0A1Z0), SPEA_BACAN  (Q81MS2), 
SPEA_BACCR  (Q819L4), SPEA_BACHD  (Q9K9K5), SPEA_BACSU  (P21885)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
YAAO_BACSU  (P37536)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1C4K; 1ORD;

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