Entry: PS00707

General information about the entry
Entry name GLYCOSYL_HYDROL_F31_2
Accession number PS00707
Entry type PATTERN
Date DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00120
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 31 signature 2.
Pattern G-[AVP]-[DT]-[LIVMTAS]-[CG]-G-[FY]-x(3)-[STP]-x(3)-L-[CL]-x-R-W-x(2)- [LVMI]-[GSA]-[SA]-[FY]-x-P-[FY]-x-R-[DNA].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 32 hits in 29 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 32 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 22
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 59.26 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AGL2_BACTQ  (Q9F234), AGLU_ASPNG  (P56526), AGLU_ASPOR  (Q12558), 
AGLU_BETVU  (O04931), AGLU_CANTS  (P29064), AGLU_HORVU  (Q43763), 
AGLU_MUCJA  (Q92442), AGLU_ORYSJ  (Q653V7), AGLU_SCHPO  (Q9C0Y4), 
AGLU_SPIOL  (O04893), AGLU_TETPY  (O00906), AMYG_CANAL  (O74254), 
AMYG_SCHOC  (P22861), GANAB_HUMAN (Q14697), GANAB_MACFA (Q4R4N7), 
GANAB_MOUSE (Q8BHN3), GANAB_PIG   (P79403), LYAG_BOVIN  (Q9MYM4), 
LYAG_HUMAN  (P10253), LYAG_MOUSE  (P70699), LYAG_PONAB  (Q5R7A9), 
LYAG_RAT    (Q6P7A9), MGA_HUMAN   (O43451), SUIS_HUMAN  (P14410), 
SUIS_RABIT  (P07768), SUIS_RAT    (P23739), SUIS_SUNMU  (O62653), 
YAJ1_SCHPO  (Q09901), YFZB_SCHPO  (Q9URX4)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AGDC_ASPCL  (A1CNK4), AGDC_ASPFC  (B0XNL6), AGDC_ASPFN  (B8MZ41), 
AGDC_ASPFU  (Q4WRH9), AGDC_ASPOR  (Q2UQV7), AGDC_ASPTN  (Q0CMA7), 
AGDC_EMENI  (Q5AWI5), AGDC_NEOFI  (A1D1E6), AGLU_SULS9  (D0KQM8), 
AGLU_SULSO  (P0CD66), GANAB_DICDI (Q94502), GLU2A_SCHPO (Q9US55), 
GLU2A_YEAST (P38138), K1161_HUMAN (Q6NSJ0), K1161_MOUSE (Q69ZQ1), 
MGAL1_HUMAN (Q6ZN80), MGAL2_HUMAN (Q2M2H8), SP15_TORCA  (P19965), 
XYLS_ECOLI  (P31434), XYLS_SULSO  (Q9P999), YCR2_ESCVU  (Q01336), 
YIHQ_ECOLI  (P32138)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP;

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