Entry: PS00711

General information about the entry
Entry name LIPOXYGENASE_1
Accession number PS00711
Entry type PATTERN
Date DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00077
Name and characterization of the entry
DescriptionLipoxygenases iron-binding region signature 1.
Pattern [HQ]-[EQ]-x(3)-H-x-[LMA]-[NEQHRCS]-[GSTA]-H-[LIVMSTAC](2)-x-E.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 66 hits in 66 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 66 hits in 66 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.51 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 4,iron
  • `Interesting' site in the pattern: 9,iron
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AOSL_PLEHO  (O16025), LOX11_SOLTU (P37831), LOX12_BOVIN (P27479), 
LOX12_HUMAN (P18054), LOX12_MOUSE (P39655), LOX12_PIG   (P16469), 
LOX12_RABIT (O19043), LOX12_SOLTU (O24379), LOX13_SOLTU (Q43189), 
LOX14_SOLTU (Q43190), LOX15_HUMAN (P16050), LOX15_PONAB (Q5RBE8), 
LOX15_RABIT (P12530), LOX15_SOLTU (Q43191), LOX16_SOLTU (Q41238), 
LOX17_SOLTU (O22507), LOX18_SOLTU (O22508), LOX1_ARATH  (Q06327), 
LOX1_HORVU  (P29114), LOX1_LENCU  (P38414), LOX1_ORYSJ  (Q76I22), 
LOX1_SOYBN  (P08170), LOX21_HORVU (P93184), LOX21_SOLTU (O24370), 
LOX22_HORVU (Q8GSM3), LOX23_HORVU (Q8GSM2), LOX2_ARATH  (P38418), 
LOX2_ORYSJ  (P29250), LOX2_PEA    (P14856), LOX2_SOYBN  (P09439), 
LOX31_SOLTU (O24371), LOX3_ARATH  (Q9LNR3), LOX3_ORYSJ  (Q7G794), 
LOX3_PEA    (P09918), LOX3_SOYBN  (P09186), LOX4_ARATH  (Q9FNX8), 
LOX4_ORYSJ  (Q53RB0), LOX4_SOYBN  (P38417), LOX5_ARATH  (Q9LUW0), 
LOX5_HUMAN  (P09917), LOX5_MESAU  (P51399), LOX5_MOUSE  (P48999), 
LOX5_ORYSJ  (Q7XV13), LOX5_RAT    (P12527), LOX6_ARATH  (Q9CAG3), 
LOX6_ORYSJ  (Q8H016), LOXA_PHAVU  (P27480), LOXA_PSEAE  (Q9I4G8), 
LOXA_SOLLC  (P38415), LOXB_PHAVU  (P27481), LOXB_SOLLC  (P38416), 
LOXC1_ORYSJ (P38419), LOXC2_ORYSJ (Q84YK8), LOXE3_HUMAN (Q9BYJ1), 
LOXE3_MOUSE (Q9WV07), LOXX_SOYBN  (P24095), LOX_PSEAI   (Q8RNT4), 
LX12B_HUMAN (O75342), LX12B_MOUSE (O70582), LX12B_RAT   (Q2KMM4), 
LX12E_MOUSE (P55249), LX12L_MOUSE (P39654), LX12L_RAT   (Q02759), 
LX15B_HUMAN (O15296), LX15B_MOUSE (O35936), LX15B_RAT   (Q8K4F2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
LILIP_NOSS1 (Q8YK97)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1F8N; 1FGM; 1FGQ; 1FGR; 1FGT; 1HU9; 1IK3; 1JNQ; 1LNH; 1LOX; 1N8Q; 1NO3; 1ROV; 1RRH; 1RRL; 1Y4K; 1YGE; 2ABT; 2ABU; 2ABV; 2FNQ; 2IUK; 2P0M; 2SBL; 3BNB; 3BNC; 3BND; 3BNE; 3D3L; 3DY5; 3FG1; 3FG3; 3FG4; 3O8Y; 3PZW; 3RDE; 3V92; 3V98; 3V99;

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