Entry: PS00723

General information about the entry

Entry name [info] POLYPRENYL_SYNTHASE_1
Accession [info] PS00723
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); NOV-1997 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00407

Name and characterization of the entry

Description [info] Polyprenyl synthases signature 1.
Pattern [info]
[LIVM](2)-x-D-D-x(2,4)-D-x(4)-R-R-[GH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 108 in 108 different sequences
Number of true positive hits 108 in 108 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 14
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.52 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
108 sequences

ATMG_ASPFL  (Q672V6    ), CHRDS_ARTSI (Q7XYS8    ), COQ1_NEUCR  (Q7S565    ), 
COQ1_YARLI  (Q6CBH3    ), COQ1_YEAST  (P18900    ), CPPAS_TANCI (P0C565    ), 
CRTE_CYAPA  (P48368    ), CRTE_ESCVU  (P22873    ), CRTE_PANAN  (P21684    ), 
CRTE_RHOCB  (P17060    ), CRTE_RHOS4  (P54976    ), DPS1_HUMAN  (Q5T2R2    ), 
DPS1_MOUSE  (Q33DR2    ), DPS1_SCHPO  (O43091    ), EFPP_MYCBO  (P0A5H9    ), 
EFPP_MYCTO  (P9WKH0    ), EFPP_MYCTU  (P9WKH1    ), FPPS1_ARATH (Q09152    ), 
FPPS1_ARTSI (Q7XYS9    ), FPPS1_LUPAL (P49351    ), FPPS1_PARAR (O24241    ), 
FPPS2_ARATH (Q43315    ), FPPS2_ARTSI (Q7XYT0    ), FPPS2_LUPAL (P49352    ), 
FPPS2_PARAR (O24242    ), FPPS_ARTAN  (P49350    ), FPPS_BOVIN  (Q8WMY2    ), 
FPPS_CHICK  (P08836    ), FPPS_GIBFU  (Q92235    ), FPPS_HELAN  (O64905    ), 
FPPS_HUMAN  (P14324    ), FPPS_KLULA  (P49349    ), FPPS_MAIZE  (P49353    ), 
FPPS_MOUSE  (Q920E5    ), FPPS_NEUCR  (Q92250    ), FPPS_RAT    (P05369    ), 
FPPS_SCHPO  (O14230    ), FPPS_YEAST  (P08524    ), FPS_DICDI   (Q9NH03    ), 
FUSS_PHOAM  (A2PZA5    ), GFPS_AERPX  (Q9UWR6    ), GFPS_NATPD  (Q3IPL1    ), 
GGPP1_ARATH (P34802    ), GGPP2_ARATH (O04046    ), GGPP3_ARATH (Q9LUD9    ), 
GGPP4_ARATH (Q9SLG2    ), GGPP6_ARATH (O22043    ), GGPP7_ARATH (Q9ZU77    ), 
GGPP8_ARATH (Q9LRR0    ), GGPP9_ARATH (Q9LUE1    ), GGPPA_ARATH (Q9LJY2    ), 
GGPPB_ARATH (Q9LIA0    ), GGPPC_ARATH (Q9LHR4    ), GGPPS_ASHGO (Q758K0    ), 
GGPPS_BOVIN (P56966    ), GGPPS_CAPAN (P80042    ), GGPPS_CATRO (Q42698    ), 
GGPPS_DICDI (Q54BK1    ), GGPPS_GIBFU (Q92236    ), GGPPS_HEVBR (Q94ID7    ), 
GGPPS_HUMAN (O95749    ), GGPPS_MOUSE (Q9WTN0    ), GGPPS_MUCCL (Q9P885    ), 
GGPPS_NEUCR (P24322    ), GGPPS_RAT   (Q6F596    ), GGPPS_SCHPO (O59703    ), 
GGPPS_SINAL (Q43133    ), GGPPS_YEAST (Q12051    ), GGPP_METMA  (Q8PW34    ), 
GGPS_SULAC  (P39464    ), GGPS_SULSO  (P95999    ), GGR_ARATH   (Q39108    ), 
GGS4_PHOAM  (B2DBE9    ), HEPS2_BACSU (P31114    ), HEPS2_GEOSE (P55785    ), 
HEXB_MICLU  (O66129    ), IDSA_METJA  (Q58270    ), IDSA_METTH  (O26156    ), 
IDSA_METTM  (Q53479    ), ISPA_AQUAE  (O66952    ), ISPA_BACSU  (P54383    ), 
ISPA_BRADU  (Q45220    ), ISPA_BUCAI  (P57537    ), ISPA_BUCAP  (Q8K9A0    ), 
ISPA_ECOLI  (P22939    ), ISPA_GEOSE  (Q08291    ), ISPA_HAEIN  (P45204    ), 
ISPA_MICLU  (O66126    ), ISPA_SINFN  (P55539    ), ISPB_ECOLI  (P0AD57    ), 
ISPB_HAEIN  (P44916    ), ISPB_SHIFL  (P0AD58    ), OPHFS_ASPCL (A1C8C3    ), 
PAXG_PENPX  (Q9C446    ), PREA_CYACA  (Q9TLS1    ), PREA_CYAPA  (P31171    ), 
PREA_PORPU  (P51268    ), PREA_PYRYE  (Q1XDL8    ), SDSA_RHOCA  (O24743    ), 
SPS1_ARATH  (Q8S948    ), SPS1_ORYSJ  (Q653T6    ), SPS2_ARATH  (Q76FS5    ), 
SPS2_ORYSJ  (Q75HZ9    ), SPS3_ARATH  (Q5HZ00    ), SPS3_ORYSJ  (Q0INZ4    ), 
VRTD_PENAE  (D7PHZ5    ), Y8742_DICDI (Q55EU7    ), Y8823_DICDI (Q54XP1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

DLP1_HUMAN  (Q86YH6    ), DLP1_MOUSE  (Q33DR3    ), DLP1_RAT    (Q5U2R1    ), 
DLP1_SCHPO  (O13851    ), DPS1_DICDI  (Q54VJ9    ), FUSS_ALTBR  (C9K2Q3    ), 
GGS1_PHOAM  (B2DBE8    ), HEXPP_SULSO (Q97W92    ), PREA_SYNY3  (P72580    ), 
TPRT_ASFB7  (Q65164    ), TPRT_ASFK5  (P0C9E2    ), TPRT_ASFM2  (Q8V9T7    ), 
TPRT_ASFP4  (P0C9E0    ), TPRT_ASFWA  (P0C9E1    )
» more

PDB
[Detailed view]
115 PDB

1FPS; 1RQI; 1RQJ; 1UBV; 1UBW; 1UBX; 1UBY; 1YQ7; 1YV5; 1ZW5; 2DH4; 2E8T; 2E8U; 2E8V; 2E8W; 2E8X; 2E90; 2E91; 2E92; 2E93; 2E94; 2E95; 2F7M; 2F89; 2F8C; 2F8Z; 2F92; 2F94; 2F9K; 2J1P; 2OPM; 2OPN; 2Q80; 2QIS; 2RAH; 2VF6; 2Z4V; 2Z4W; 2Z4X; 2Z4Y; 2Z4Z; 2Z50; 2Z52; 2Z78; 2Z7H; 2Z7I; 2ZEU; 2ZEV; 3AQ0; 3AQB; 3AQC; 3B7L; 3CP6; 3N1V; 3N1W; 3N3L; 3N45; 3N46; 3N49; 3N5H; 3N5J; 3N6K; 3RYE; 3S4J; 4DEM; 4GA3; 4H5C; 4H5D; 4H5E; 4JVJ; 4KFA; 4KK2; 4KPD; 4KPJ; 4KQ5; 4KQS; 4KQU; 4L2X; 4LFV; 4LPG; 4LPH; 4N1Z; 4N9U; 4NFI; 4NFJ; 4NFK; 4NG6; 4NKE; 4NKF; 4NUA; 4OGU; 4P0V; 4P0W; 4P0X; 4PVX; 4PVY; 4Q23; 4QPF; 4QXS; 4RXA; 4XQR; 4XQS; 4XQT; 5CG5; 5CG6; 5DGN; 5DIQ; 5DJP; 5DJR; 5DJV; 5E8H; 5E8K; 5E8L; 5ERN; 5ERO
» more

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