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Entry: PS00742
General information about the entry
Entry namePEP_ENZYMES_2
Accession numberPS00742
Entry typePATTERN
DateDEC-1992 (CREATED); DEC-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00527
Name and characterization of the entry
DescriptionPEP-utilizing enzymes signature 2.
Pattern[DEQSKN]-x-[LIVMF]-[SA]-[LIVMF]-G-[ST]-N-D-[LIVM]-x-Q-[LIVMFYGT]- [STALIV]-[LIVMFY]-[GAS]-x(2)-R.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 83 hits in 83 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 83 hits in 83 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 10
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 89.25 %
Comments
  • Taxonomic range: Archaebacteria, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
PPDK1_ARATH (O23404), PPDK1_MAIZE (P11155), PPDK1_ORYSJ (Q6AVA8), 
PPDK2_ORYSJ (Q75KR1), PPDK_CLOSY  (P22983), PPDK_ENTHI  (P37213), 
PPDK_FLABI  (Q39735), PPDK_FLABR  (Q39734), PPDK_FLAPR  (Q42736), 
PPDK_FLATR  (P22221), PPDK_GIAIN  (P51776), PPDK_MESCR  (Q42910), 
PPDK_RHIME  (Q59754), PPDK_RICBR  (Q1RH78), PPDK_RICCN  (Q92HI8), 
PPDK_RICFE  (Q4ULI7), PPDK_RICPR  (Q9ZD55), PPDK_RICTY  (Q68WP2), 
PPDK_TREPA  (O83728), PPSA_AERPE  (Q9YEC5), PPSA_AQUAE  (O67899), 
PPSA_ARCFU  (O29548), PPSA_DEIRA  (O83026), PPSA_ECOLI  (P23538), 
PPSA_HELPJ  (Q9ZMV4), PPSA_HELPY  (P56070), PPSA_METJA  (Q57962), 
PPSA_NEIMB  (Q9K0I2), PPSA_PYRAB  (Q9V2H7), PPSA_PYRFU  (P42850), 
PPSA_PYRHO  (O57830), PPSA_STAMF  (P46893), PPSA_SYNY3  (Q55905), 
PT1P_ECOLI  (P37177), PT1P_SALTY  (P37178), PT1_BACHD   (Q9K8D3), 
PT1_BACME   (O69251), PT1_BACSI   (O83018), PT1_BACSU   (P08838), 
PT1_BORBU   (O51508), PT1_BUCAI   (Q9WXI6), PT1_BUCAP   (Q8KA50), 
PT1_BUCBP   (Q89B04), PT1_CHLMU   (Q9PK57), PT1_CHLPN   (Q9Z9E3), 
PT1_CHLTR   (O84340), PT1_CUPNH   (P23536), PT1_ECOLI   (P08839), 
PT1_ENTFA   (P23530), PT1_GEOSE   (P42014), PT1_HAEIN   (P43922), 
PT1_LACLA   (Q9CJ82), PT1_LACLC   (Q9ZAD8), PT1_LACSK   (O07126), 
PT1_LISIN   (Q92D19), PT1_LISMO   (O31149), PT1_LYSSH   (Q84F83), 
PT1_MYCCT   (P45617), PT1_MYCGE   (P47668), PT1_MYCPN   (P75168), 
PT1_SALTI   (P0A250), PT1_SALTY   (P0A249), PT1_STAAC   (Q5HH01), 
PT1_STAAM   (Q931U2), PT1_STAAN   (Q99V14), PT1_STAAR   (Q6GI01), 
PT1_STAAS   (Q6GAD0), PT1_STAAU   (P51183), PT1_STAAW   (Q8NX83), 
PT1_STACT   (P23533), PT1_STAEQ   (Q5HQ85), PT1_STAES   (Q8CT19), 
PT1_STRCO   (Q9KZP1), PT1_STREI   (Q9WXK9), PT1_STRMU   (P45595), 
PT1_STRSL   (P30299), PTFAX_ECO57 (Q8XBQ8), PTFAX_ECOL6 (Q8FFD8), 
PTFAX_RHOCA (P23388), PTFAX_SHIFL (Q83QP3), PTFAX_XANCP (P45597), 
PTFX1_ECOLI (P77439), PTFX2_ECOLI (P32670)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
DHAM_ECOLI  (P37349), GWD1_ARATH  (Q9SAC6), GWD1_CITRE  (Q8LPT9), 
GWD1_SOLTU  (Q9AWA5), GWD2_ARATH  (Q9STV0), PPSA_METTH  (O27190), 
PPS_BACSU   (O34309), PWD_ARATH   (Q6ZY51), PWD_ORYSJ   (Q2QTC2), 
YVKC_BACSU  (O34796)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PPSA_ENTAG  (O54457)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		1DIK; 1GGO; 1JDE; 1KBL; 1KC7; 1VBG; 1VBH; 2DIK; 2HRO; 2HWG; 2KX9; 2L5H; 2OLS; 2R82; 2WQD; 2XDF;

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