Entry: PS00753

General information about the entry
Entry name XPA_2
Accession number PS00753
Entry type PATTERN
Date DEC-1992 (CREATED); DEC-1992 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00611
Name and characterization of the entry
DescriptionXPA protein signature 2.
Pattern [LIVM](2)-T-[KR]-T-E-x-K-x-[DE]-Y-[LIVMF](2)-x-D-x-[DE].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 7 hits in 7 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 7 hits in 7 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 77.78 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RAD14_YEAST (P28519), XPA_CHICK   (P27089), XPA_CRIGR   (Q64029), 
XPA_DROME   (P28518), XPA_HUMAN   (P23025), XPA_MOUSE   (Q64267), 
XPA_XENLA   (P27088)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RAD14_CANAL (P53709), RAD14_SCHPO (O59753)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1D4U; 1XPA;

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