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PROSITE entry PS00755


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General information about the entry

Entry name [info] SECY_1
Accession [info] PS00755
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00612

Name and characterization of the entry

Description [info] Protein secY signature 1.
Pattern [info] 
[GSTL]-[LIVMFK]-[LIVMFCA]-x-[LIVMF]-[GSAN]-[LIVM]-x-P-[LIVMFYN]-[LIVMFY]-
x-[AS]-[GSTQD]-[LIVMFAT](3)-[EQ]-[LIVMFA](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 124 in 124 different sequences
Number of true positive hits 124 in 124 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.12 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 124 sequences 

S61A1_BOVIN (Q5EA68), S61A1_CANLF (P38377), S61A1_DANRE (Q90ZM2), 

S61A1_HUMAN (P61619), S61A1_MOUSE (P61620), S61A1_ONCMY (Q98SN9), 
S61A1_PONAB (Q5R5L5), S61A1_RAT   (P61621), S61A2_BOVIN (Q2KHX4), 
S61A2_DANRE (Q90YL4), S61A2_HUMAN (Q9H9S3), S61A2_MOUSE (Q9JLR1), 
S61A2_ONCMY (Q98SN8), S61A2_PONAB (Q5NVM7), SC61A_BORSA (Q8AY33), 
SC61A_BOVVA (Q8AY31), SC61A_CANAL (Q9P8E3), SC61A_CANGA (Q6FRY3), 
SC61A_DEBHA (Q6BN08), SC61A_DICDI (Q54XK2), SC61A_DISMA (Q7T277), 
SC61A_EREGS (Q752H7), SC61A_GADOC (Q8AY32), SC61A_HALRO (Q25147), 
SC61A_HARAN (Q7T278), SC61A_HEMAM (Q8AY34), SC61A_KLULA (Q6CPY9), 
SC61A_NEUCR (Q870W0), SC61A_NOTAN (Q8AY35), SC61A_PAGBO (Q8AY36), 
SC61A_PYRSA (P38379), SC61A_SCHPO (P79088), SC61A_WICAO (Q96TW8), 
SC61A_YARLI (P78979), SC61A_YEAST (P32915), SCY1_ARATH  (Q38885), 
SECY1_LACKK (F6CD01), SECY_AERPE  (Q9YDD0), SECY_ANTSP  (Q37143), 
SECY_AQUAE  (O66491), SECY_ARCFU  (O28377), SECY_BACLD  (Q05207), 
SECY_BACSU  (P16336), SECY_BORBU  (O51451), SECY_BUCAI  (P57571), 
SECY_BUCAK  (P49976), SECY_BUCAP  (Q8K969), SECY_BUCBP  (Q89A85), 
SECY_CHLMU  (Q9PJN1), SECY_CHLPN  (Q9Z7S5), SECY_CHLTR  (P28539), 
SECY_CORGL  (P38376), SECY_CYACA  (P46249), SECY_CYAPA  (P25014), 
SECY_DIALT  (P28540), SECY_ECO57  (P0AGA4), SECY_ECOL6  (P0AGA3), 
SECY_ECOLI  (P0AGA2), SECY_GUITH  (P28527), SECY_HAEIN  (P43804), 
SECY_HALH5  (P38375), SECY_HALMA  (P28542), SECY_HALSA  (Q9HPB1), 
SECY_HALVD  (Q977V3), SECY_HELPJ  (Q9ZJS9), SECY_HELPY  (O25879), 
SECY_LACLA  (P58118), SECY_LACLC  (P27148), SECY_MAIZE  (O63066), 
SECY_METJA  (Q60175), SECY_METTH  (O26134), SECY_METVA  (P28541), 
SECY_MICLU  (P33108), SECY_MYCBO  (P0A5Z3), SECY_MYCCT  (P10250), 
SECY_MYCGA  (O52351), SECY_MYCGE  (P47416), SECY_MYCLE  (O33006), 
SECY_MYCPN  (Q59548), SECY_MYCTO  (P9WGN2), SECY_MYCTU  (P9WGN3), 
SECY_NEOYE  (Q1XDJ1), SECY_ORYSJ  (Q6ZG25), SECY_PEA(Q9XQU4), 
SECY_PORPU  (P51297), SECY_PSEAE  (Q9HWF5), SECY_PYRAB  (Q9V1V8), 
SECY_PYRFU  (Q8U019), SECY_PYRHO  (O59442), SECY_PYRSA  (P38397), 
SECY_RICBR  (Q1RHP1), SECY_RICCN  (Q92GY6), SECY_RICFE  (Q4UMQ9), 
SECY_RICPR  (Q9ZCS5), SECY_RICTY  (Q68W98), SECY_SACS2  (Q9UX84), 
SECY_SHIFL  (P0AGA5), SECY_SPIOL  (P93690), SECY_STAA8  (O08387), 
SECY_STAAC  (Q5HDX8), SECY_STAAM  (Q99S39), SECY_STAAN  (Q7A468), 
SECY_STAAR  (Q6GEK3), SECY_STAAS  (Q6G791), SECY_STAAW  (Q7A086), 
SECY_STACT  (Q05217), SECY_STAEQ  (Q5HM19), SECY_STAES  (Q8CNF3), 
SECY_STRCO  (P46785), SECY_STRGB  (Q59912), SECY_STRGC  (A8AZK5), 
SECY_STRGR  (Q59916), SECY_STRLI  (P49977), SECY_STRSC  (P43416), 
SECY_STRSV  (A3CK84), SECY_SULAC  (P49978), SECY_SYNE7  (P0A4H0), 
SECY_SYNP6  (P0A4H1), SECY_SYNY3  (P77964), SECY_THEMA  (Q9X1I9), 
SECY_TRICV  (P49461), SECY_VAULI  (B7T1W7), SECY_VIBCH  (P78283), 
SSH1_YEAST  (P38353)
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

SECY2_LACKK (F6CFW7), SECY_CYAM1  (Q85FU6), SECY_EMIHU  (Q4G351), 

SECY_HETA2  (B2XTD8), SECY_THET8  (Q5SHQ8)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

SECY_GEOSE  (P28620), SECY_PARDE  (P72179)


				
	

	

		PDB
[Detailed view]		
		
			68 PDB
			


			1RH5; 1RHZ; 2AKH; 2AKI; 2WW9; 2WWA; 2WWB; 2YXQ; 2YXR; 3BO0; 3BO1; 3DIN; 
			
				3DKN; 3DL8; 3J45; 3J46; 3JC2; 3MP7; 4CG5; 4CG6; 4CG7; 4V4N; 4V6M; 4V7I; 
				5A6U; 5ABB; 5GAE; 5MG3; 5NCO; 6FTG; 6FTI; 6FTJ; 6N3Q; 6ND1; 6R7L; 6R7Q; 
				6W6L; 6Z3T; 7AFT; 7KAH; 7KAI; 7KAJ; 7KAO; 7KAP; 7KAQ; 7KAR; 7KAS; 7KAT; 
				7KAU; 7KB5; 7TM3; 7TUT; 8B6L; 8BTK; 8DNV; 8DNW; 8DNX; 8DNY; 8DNZ; 8DO0; 
				8DO1; 8DO2; 8DO3; 8OJ0; 8OJ8; 8RJB; 8RJC; 8RJD
			
			

			» more