Entry: PS00761

General information about the entry

Entry name [info] SPASE_I_3
Accession [info] PS00761
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00418

Name and characterization of the entry

Description [info] Signal peptidases I signature 3.
Pattern [info]
[LIVMFYW](2)-{NLPA}-{T}-G-D-[NH]-{PIEW}-x(2)-[SND]-x(2)-[SG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 106 in 106 different sequences
Number of true positive hits 88 in 88 different sequences
Number of 'unknown' hits 0
Number of false positive hits 18 in 18 different sequences
Number of false negative sequences 61
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 83.02 %
Recall (true positives / (true positives + false negatives)) 59.06 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
88 sequences

IMP2L_BOVIN (Q2KI92    ), IMP2L_DANRE (Q6AZD4    ), IMP2L_HUMAN (Q96T52    ), 
IMP2L_MOUSE (Q8BPT6    ), IMP2L_XENLA (Q5PQ63    ), IMP2_YEAST  (P46972    ), 
LEP1_BACAM  (P41026    ), LEP1_SYNY3  (P72660    ), LEP2_BACAM  (P41025    ), 
LEP2_SYNY3  (P73157    ), LEPP_BACNA  (P37943    ), LEPQ_BACNA  (Q57350    ), 
LEPS_BACSU  (P28628    ), LEPT_BACSU  (P71013    ), LEPU_BACSU  (P42959    ), 
LEPV_BACSU  (O07560    ), LEP_AQUAE   (O67088    ), LEP_BACCL   (P41027    ), 
LEP_BACLI   (P42668    ), LEP_BUCAI   (P57347    ), LEP_BUCAP   (Q8K9R0    ), 
LEP_BUCBP   (Q89AM6    ), LEP_ECOLI   (P00803    ), LEP_HAEIN   (P44454    ), 
LEP_HELPJ   (Q9ZLQ5    ), LEP_HELPY   (O25300    ), LEP_MYCLE   (O33021    ), 
LEP_MYCTO   (P9WKA0    ), LEP_MYCTU   (P9WKA1    ), LEP_PHOLA   (Q51876    ), 
LEP_PSEAE   (Q9I5G7    ), LEP_PSEFL   (P26844    ), LEP_RICAH   (A8GM78    ), 
LEP_RICB8   (A8GYE1    ), LEP_RICBR   (Q1RHA1    ), LEP_RICCK   (A8EXI2    ), 
LEP_RICCN   (Q92JB1    ), LEP_RICFE   (Q4UKA7    ), LEP_RICM5   (A8F0M1    ), 
LEP_RICPR   (Q9ZE32    ), LEP_RICRS   (A8GQT7    ), LEP_RICTY   (Q8L2J7    ), 
LEP_SALTI   (P0A1W3    ), LEP_SALTY   (P0A1W2    ), LEP_STAAC   (Q5HHB9    ), 
LEP_STAAM   (P0A067    ), LEP_STAAN   (P0A068    ), LEP_STAAR   (Q6GIC3    ), 
LEP_STAAS   (Q6GAW1    ), LEP_STAAU   (P0A070    ), LEP_STAAW   (P0A069    ), 
PLSP1_ARATH (Q8H0W1    ), SC11A_BOVIN (P67810    ), SC11A_CANLF (P67811    ), 
SC11A_HUMAN (P67812    ), SC11A_MOUSE (Q9R0P6    ), SC11A_PONAB (Q5R9C7    ), 
SC11A_RAT   (P42667    ), SC11B_HUMAN (P0C7V7    ), SC11C_CANLF (P13679    ), 
SC11C_HUMAN (Q9BY50    ), SC11C_MOUSE (Q9D8V7    ), SC11C_PONAB (Q5RC30    ), 
SC11C_RAT   (Q9WTR7    ), SEC11_CANAL (Q5A869    ), SEC11_CANAW (C4YNJ0    ), 
SEC11_CANDC (B9WKT4    ), SEC11_CANTT (C5M4J6    ), SEC11_CLAL4 (C4Y3D4    ), 
SEC11_DEBHA (Q6BP15    ), SEC11_LODEL (A5DS09    ), SEC11_PICGU (A5DIZ8    ), 
SEC11_PICPG (C4QXP7    ), SEC11_PICST (A3LXS1    ), SEC11_SCHCM (D8Q7Q5    ), 
SEC11_YARLI (Q6CAG9    ), SEC11_YEAS1 (B3LTI7    ), SEC11_YEAS2 (C7GLT4    ), 
SEC11_YEAS7 (A6ZVU2    ), SEC11_YEAS8 (C8ZAS4    ), SEC11_YEASA (E7KDY6    ), 
SEC11_YEASB (E7Q587    ), SEC11_YEASL (E7KQ01    ), SEC11_YEAST (P15367    ), 
SEC11_YEASV (E7LVX4    ), SEC11_YEASZ (E7QG89    ), TPP1_ARATH  (O04348    ), 
TPP2_ARATH  (Q9M9Z2    )
» more

UniProtKB/Swiss-Prot
False negative sequences
61 sequences

IMP1L_HUMAN (Q96LU5    ), IMP1L_MOUSE (Q9CQU8    ), IMP1L_XENTR (Q28I39    ), 
IMP1_YEAST  (P28627    ), IMP2L_SCHPO (Q9UST2    ), LEPH_STAAC  (Q5HHC0    ), 
LEPH_STAAM  (P0A063    ), LEPH_STAAN  (P0A064    ), LEPH_STAAR  (Q6GIC4    ), 
LEPH_STAAS  (Q6GAW2    ), LEPH_STAAU  (P0A066    ), LEPH_STAAW  (P0A065    ), 
LEP_STRPN   (O07344    ), LEP_STRR6   (P59662    ), SEC11_AJEC8 (F0UDD2    ), 
SEC11_AJECG (C0NKT8    ), SEC11_AJECH (C6HB29    ), SEC11_AJECN (A6QX24    ), 
SEC11_AJEDR (C5G8L5    ), SEC11_AJEDS (C5JJG5    ), SEC11_ARTBC (D4ALL0    ), 
SEC11_ARTGP (E4V4X0    ), SEC11_ARTOC (C5FQ45    ), SEC11_ASHGO (Q759W4    ), 
SEC11_ASPCL (A1CL29    ), SEC11_ASPFC (B0XWT3    ), SEC11_ASPFU (Q4WYF4    ), 
SEC11_ASPOR (Q2UBW3    ), SEC11_ASPTN (Q0CQC5    ), SEC11_CHAGB (Q2H1P3    ), 
SEC11_COCP7 (C5PA33    ), SEC11_COCPS (E9CXH2    ), SEC11_COLGM (E3QXY4    ), 
SEC11_EMENI (Q5B8K4    ), SEC11_GROCL (F0XJH4    ), SEC11_KLULA (Q6CMR5    ), 
SEC11_LACBS (B0D4L0    ), SEC11_LACTC (C5DDH1    ), SEC11_LEPMJ (E5A8D2    ), 
SEC11_MAGO7 (A4RGA1    ), SEC11_METAQ (E9E796    ), SEC11_METRA (E9F8V9    ), 
SEC11_NECH7 (C7ZHK5    ), SEC11_NEOFI (A1D6D8    ), SEC11_NEUCR (Q7RY44    ), 
SEC11_OGAPD (E7R7C4    ), SEC11_PARBA (C1GU90    ), SEC11_PARBD (C1FYD2    ), 
SEC11_PARBP (C0S3S0    ), SEC11_PENRW (B6HC89    ), SEC11_PODAN (B2B3T2    ), 
SEC11_PYRTR (B2WEL2    ), SEC11_PYRTT (E3RR70    ), SEC11_SCLS1 (A7E716    ), 
SEC11_TALMQ (B6Q5G0    ), SEC11_TALSN (B8M5K5    ), SEC11_TRIVH (D4D5I1    ), 
SEC11_TUBMM (D5GNC3    ), SEC11_UNCRE (C4JYM4    ), SEC11_VERA1 (C9S8G0    ), 
SEC11_ZYGRC (C5E3W1    )
» more

UniProtKB/Swiss-Prot
False positive sequences
18 sequences

ACSA_PASMU  (Q9CMW1    ), ADPRL_MIMIV (Q5UQP4    ), C508D_DICDI (Q1ZXA4    ), 
CBIK_SALTY  (Q05592    ), CCDC9_MOUSE (Q8VC31    ), CT54_CONVE  (Q9BPF7    ), 
DGOK_ECOLI  (P31459    ), GLNA1_DICDI (Q86B00    ), HLDE_DICNV  (A5EWS4    ), 
MYO7B_MOUSE (Q99MZ6    ), NACA_DICDI  (Q54U07    ), OADC_BURXL  (Q13Q00    ), 
PUM8_ARATH  (Q9LM20    ), PURT_ACIAD  (Q6FAM6    ), RECA_IDILO  (Q5QUB8    ), 
SYR_OCEIH   (Q8EM45    ), TCPH_PLAF7  (O77323    ), Y309_MYCGE  (P47551    )
» more

PDB
[Detailed view]
9 PDB

1B12; 1KN9; 1T7D; 3IIQ; 3S04; 4WVG; 4WVH; 4WVI; 4WVJ

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