Entry: PS00764

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General information about the entry

Entry name [info] ENDONUCLEASE_III_1
Accession [info] PS00764
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2001 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III iron-sulfur binding region signature.
Pattern [info]
C-x(3)-[KRSN]-P-[KRAGL]-C-x(2)-C-x(5)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 21
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 58.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 6
Site [info] iron_sulfur at position 8
Site [info] iron_sulfur at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

END3_BACSU  (P39788), END3_ECOL6  (P0AB84), END3_ECOLI  (P0AB83), 
END3_HAEIN  (P44319), END3_MYCBO  (P63541), END3_MYCLE  (Q9CB92), 
END3_MYCTO  (P9WQ10), END3_MYCTU  (P9WQ11), END3_RICPR  (O05956), 
END3_SYNY3  (P73715), END3_THEMA  (Q9WYK0), END3_TREPA  (O83754), 
GTMR_METTF  (P29588), MUTYH_HUMAN (Q9UIF7), MUTYH_MOUSE (Q99P21), 
MUTYH_RAT   (Q8R5G2), MUTY_BUCAI  (P57617), MUTY_BUCAP  (Q8K926), 
MUTY_BUCBP  (Q89A45), MUTY_ECOLI  (P17802), MUTY_HAEIN  (P44320), 
MUTY_SALTY  (Q05869), MYH1_SCHPO  (Q10159), NTH1_ARATH  (Q9SIC4), 
NTH_BOVIN   (Q2KID2), NTH_CAEEL   (P54137), NTH_CHICK   (A7M7B9), 
NTH_ENCCU   (Q8SRB8), UVEN_MICLC  (P46303)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

DME_ARATH   (Q8LK56), DML2_ARATH  (Q9SR66), DML3_ARATH  (O49498), 
END3_BUCAI  (P57219), END3_BUCAP  (Q8KA16), END3_BUCBP  (Q89AW4), 
END3_METJA  (Q58030), END3_RICCN  (Q92GH4), END3_RICFE  (Q4UK93), 
END3_RICTY  (Q68W04), MUTYH_ARATH (F4JRF4), NTH1_YEAST  (P31378), 
NTH2_ARATH  (B9DFZ0), NTH2_YEAST  (Q08214), NTH_EMENI   (C8VC05), 
NTH_HUMAN   (P78549), NTH_MOUSE   (O35980), NTH_SCHPO   (Q09907), 
ROS1_ARATH  (Q9SJQ6), Y1434_METJA (Q58829), YFHQ_BACSU  (O31584)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MUTY_AERHY  (P46230)

		
PDB
[Detailed view]
15 PDB

1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 1WEI; 2ABK; 3N5N
» More

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