PROSITE logo

PROSITE entry PS00764


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] ENDONUCLEASE_III_1
Accession [info] PS00764
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III iron-sulfur binding region signature.
Pattern [info] 
C-x(3)-[KRSN]-P-[KRAGL]-C-x(2)-C-x(5)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 24
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 55.56 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 6
Site [info] iron_sulfur at position 8
Site [info] iron_sulfur at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 30 sequences 

END3_BACSU  (P39788), END3_ECOL6  (P0AB84), END3_ECOLI  (P0AB83), 

END3_HAEIN  (P44319), END3_MYCBO  (P63541), END3_MYCLE  (Q9CB92), 
END3_MYCTO  (P9WQ10), END3_MYCTU  (P9WQ11), END3_RICPR  (O05956), 
END3_SYNY3  (P73715), END3_THEMA  (Q9WYK0), END3_TREPA  (O83754), 
MIG_AERPE   (Q9YDP0), MIG_METTF   (P29588), MUTYH_HUMAN (Q9UIF7), 
MUTYH_MOUSE (Q99P21), MUTYH_RAT   (Q8R5G2), MUTY_BUCAI  (P57617), 
MUTY_BUCAP  (Q8K926), MUTY_BUCBP  (Q89A45), MUTY_ECOLI  (P17802), 
MUTY_HAEIN  (P44320), MUTY_SALTY  (Q05869), MYH1_SCHPO  (Q10159), 
NTH1_ARATH  (Q9SIC4), NTH_BOVIN   (Q2KID2), NTH_CAEEL   (P54137), 
NTH_CHICK   (A7M7B9), NTH_ENCCU   (Q8SRB8), UVEN_MICLC  (P46303)
» more

UniProtKB/Swiss-Prot
False negative sequences		 24 sequences 

DG783_ARATH (F4JCQ3), DME_ARATH   (Q8LK56), DML2_ARATH  (Q9SR66), 

DML3_ARATH  (O49498), END3_BUCAI  (P57219), END3_BUCAP  (Q8KA16), 
END3_BUCBP  (Q89AW4), END3_METJA  (Q58030), END3_RICCN  (Q92GH4), 
END3_RICFE  (Q4UK93), END3_RICTY  (Q68W04), MIG_PYRAE   (Q7LX22), 
MUTYH_ARATH (F4JRF4), MUTY_BACSU  (O31584), MUTY_GEOSE  (P83847), 
NTH1_YEAST  (P31378), NTH2_ARATH  (B9DFZ0), NTH2_YEAST  (Q08214), 
NTH_EMENI   (C8VC05), NTH_HUMAN   (P78549), NTH_MOUSE   (O35980), 
NTH_SCHPO   (Q09907), ROS1_ARATH  (Q9SJQ6), Y1434_METJA (Q58829)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

MUTY_AERHY  (P46230)


				
	

	

		PDB
[Detailed view]		
		
			17 PDB
			


			1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 
			
				1WEI; 2ABK; 3N5N; 7EF8; 7EF9
			
			

			» more