Entry: PS00768

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General information about the entry

Entry name [info] TRANSTHYRETIN_1
Accession [info] PS00768
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2002 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00617

Name and characterization of the entry

Description [info] Transthyretin signature 1.
Pattern [info]
[KH]-[IV]-L-[DN]-x(3)-G-x-P-[AG]-x(2)-[LIVM]-x-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.78 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] T4-binding at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
44 sequences

HIUH1_CAEEL (Q21882), HIUH1_RHIME (Q92VB9), HIUH2_CAEEL (O44578), 
HIUH2_RHIME (Q92UG5), HIUH_BACHD  (Q9KET9), HIUH_BACSU  (O32142), 
HIUH_BRUME  (Q8YFU1), HIUH_BRUSU  (Q8G228), HIUH_CAUCR  (Q9A545), 
HIUH_DANRE  (Q06S87), HIUH_DEIRA  (Q9RV69), HIUH_ECO57  (Q8XB75), 
HIUH_ECOLI  (P76341), HIUH_PSEAE  (Q9I3J5), HIUH_RALSO  (Q8XXJ7), 
HIUH_RHILO  (Q98CI7), HIUH_SALDU  (Q4VYA5), HIUH_SALTI  (Q8Z7Q6), 
HIUH_SALTY  (Q8ZQ52), HIUH_SCHPO  (O74492), TTHL_ARATH  (Q9LVM5), 
TTHY_BOVIN  (O46375), TTHY_CHICK  (P27731), TTHY_CROPO  (O55245), 
TTHY_ERIEU  (Q9MYN8), TTHY_HUMAN  (P02766), TTHY_LITCT  (P31779), 
TTHY_MACEU  (P42204), TTHY_MACFA  (Q8HXW1), TTHY_MACGI  (Q29616), 
TTHY_MONDO  (P49141), TTHY_MOUSE  (P07309), TTHY_PANTR  (Q5U7I5), 
TTHY_PETBR  (P49142), TTHY_PIG    (P50390), TTHY_PONAB  (Q5NVS2), 
TTHY_RABIT  (P07489), TTHY_RAT    (P02767), TTHY_SHEEP  (P12303), 
TTHY_SMIMA  (P49143), TTHY_SORAR  (O46654), TTHY_TILRU  (P30623), 
TTHY_XENLA  (B7ZS96), TTHY_XENTR  (A4QNN7)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

HIUH_MOUSE  (Q9CRB3)

		
PDB
[Detailed view]
198 PDB

1BM7; 1BMZ; 1BZ8; 1BZD; 1BZE; 1DVQ; 1DVS; 1DVT; 1DVU; 1DVX; 1DVY; 1DVZ; 1E3F; 1E4H; 1E5A; 1ETA; 1ETB; 1F41; 1F86; 1FH2; 1FHN; 1G1O; 1GKE; 1GKO; 1ICT; 1IE4; 1III; 1IIK; 1IJN; 1KGI; 1KGJ; 1QAB; 1QWH; 1RLB; 1SOK; 1SOQ; 1TFP; 1THA; 1THC; 1TLM; 1TSH; 1TT6; 1TTA; 1TTB; 1TTR; 1TYR; 1TZ8; 1U21; 1X7S; 1X7T; 1Y1D; 1Z7J; 1ZCR; 1ZD6; 2B14; 2B15; 2B16; 2B77; 2B9A; 2F7I; 2F8I; 2FBR; 2FLM; 2G2N; 2G2P; 2G3X; 2G3Z; 2G4E; 2G4G; 2G5U; 2G9K; 2GAB; 2GPZ; 2H0E; 2H0F; 2H0J; 2H1X; 2H4E; 2H6U; 2IGL; 2NOY; 2PAB; 2QEL; 2QGB; 2QGC; 2QGD; 2QGE; 2QPF; 2ROX; 2ROY; 2TRH; 2TRY; 2WQA; 3A4D; 3A4E; 3A4F; 3B56; 3BSZ; 3BT0; 3CBR; 3CFM; 3CFN; 3CFQ; 3CFT; 3CN0; 3CN1; 3CN2; 3CN3; 3CN4; 3CXF; 3D2T; 3D7P; 3DGD; 3DID; 3DJR; 3DJS; 3DJZ; 3DK0; 3DK2; 3DO4; 3ESN; 3ESO; 3ESP; 3FC8; 3FCB; 3GLZ; 3GPS; 3GRB; 3GRG; 3GS0; 3GS4; 3GS7; 3HJ0; 3I9P; 3IMR; 3IMS; 3IMT; 3IMU; 3IMV; 3IMW; 3IPB; 3IPE; 3IWU; 3IWV; 3KGU; 3M1O; 3NEE; 3NEO; 3P3R; 3P3S; 3P3T; 3P3U; 3Q1E; 3SSG; 3TCT; 3U2I; 3U2J; 3W3B; 4ABQ; 4ABU; 4ABV; 4ABW; 4AC2; 4AC4; 4ACT; 4ANK; 4DER; 4DES; 4DET; 4DEU; 4DEW; 4FI6; 4FI7; 4FI8; 4HIQ; 4HIS; 4HJS; 4HJT; 4HJU; 4I85; 4I87; 4I89; 4IIZ; 4IK6; 4IK7; 4IKI; 4IKJ; 4IKK; 4IKL; 4KY2; 4L1S; 4L1T; 4MAS; 4MRB; 4MRC; 4N85; 4N86; 5TTR
» More

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