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Entry: PS00769

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General information about the entry

Entry name [info] TRANSTHYRETIN_2
Accession [info] PS00769
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00617

Name and characterization of the entry

Description [info] Transthyretin signature 2.
Pattern [info]
[YWF]-[TH]-[IVT]-[AP]-x(2)-[LIVM]-[STA]-[PQ]-[FYWG]-[GS]-[FY]-[QST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 43 in 43 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.56 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

HIUH1_CAEEL (Q21882), HIUH1_RHIME (Q92VB9), HIUH2_CAEEL (O44578), 
HIUH2_RHIME (Q92UG5), HIUH_BACHD  (Q9KET9), HIUH_BACSU  (O32142), 
HIUH_BRUME  (Q8YFU1), HIUH_BRUSU  (Q8G228), HIUH_CAUCR  (Q9A545), 
HIUH_DEIRA  (Q9RV69), HIUH_ECO57  (Q8XB75), HIUH_ECOLI  (P76341), 
HIUH_MOUSE  (Q9CRB3), HIUH_PSEAE  (Q9I3J5), HIUH_RALSO  (Q8XXJ7), 
HIUH_RHILO  (Q98CI7), HIUH_SALDU  (Q4VYA5), HIUH_SALTI  (Q8Z7Q6), 
HIUH_SALTY  (Q8ZQ52), HIUH_SCHPO  (O74492), TTHL_ARATH  (Q9LVM5), 
TTHY_BOVIN  (O46375), TTHY_CHICK  (P27731), TTHY_CROPO  (O55245), 
TTHY_ERIEU  (Q9MYN8), TTHY_HUMAN  (P02766), TTHY_LITCT  (P31779), 
TTHY_MACEU  (P42204), TTHY_MACFA  (Q8HXW1), TTHY_MACGI  (Q29616), 
TTHY_MONDO  (P49141), TTHY_MOUSE  (P07309), TTHY_PANTR  (Q5U7I5), 
TTHY_PETBR  (P49142), TTHY_PIG    (P50390), TTHY_PONAB  (Q5NVS2), 
TTHY_RABIT  (P07489), TTHY_RAT    (P02767), TTHY_SHEEP  (P12303), 
TTHY_SMIMA  (P49143), TTHY_SORAR  (O46654), TTHY_TILRU  (P30623), 
TTHY_XENLA  (B7ZS96)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

HIUH_DANRE  (Q06S87), TTHY_XENTR  (A4QNN7)

		
PDB
[Detailed view]
199 PDB

1BM7; 1BMZ; 1BZ8; 1BZD; 1BZE; 1DVQ; 1DVS; 1DVT; 1DVU; 1DVX; 1DVY; 1DVZ; 1E3F; 1E4H; 1E5A; 1ETA; 1ETB; 1F41; 1F86; 1FH2; 1FHN; 1G1O; 1GKE; 1GKO; 1ICT; 1IE4; 1KGI; 1KGJ; 1QAB; 1QWH; 1RLB; 1TFP; 1THA; 1THC; 1TLM; 1TSH; 1TT6; 1TTA; 1TTB; 1TTC; 1TTR; 1TYR; 1TZ8; 1U21; 1X7S; 1X7T; 1Y1D; 1Z7J; 1ZCR; 1ZD6; 2B14; 2B15; 2B16; 2B77; 2B9A; 2F7I; 2F8I; 2FBR; 2FLM; 2G2N; 2G2P; 2G3X; 2G3Z; 2G4E; 2G4G; 2G5U; 2G9K; 2GAB; 2GPZ; 2H0E; 2H0F; 2H0J; 2H4E; 2IGL; 2NOY; 2PAB; 2QEL; 2QGB; 2QGC; 2QGD; 2QGE; 2QPF; 2ROX; 2ROY; 2TRH; 2TRY; 2WQA; 3A4D; 3A4E; 3A4F; 3B56; 3BSZ; 3BT0; 3CBR; 3CFM; 3CFN; 3CFQ; 3CFT; 3CN0; 3CN1; 3CN2; 3CN3; 3CN4; 3D2T; 3D7P; 3DGD; 3DID; 3DJR; 3DJS; 3DJT; 3DJZ; 3DK0; 3DO4; 3ESN; 3ESO; 3ESP; 3FC8; 3FCB; 3GLZ; 3GPS; 3GRB; 3GRG; 3GS0; 3GS4; 3GS7; 3HJ0; 3I9A; 3I9I; 3I9P; 3IMR; 3IMS; 3IMT; 3IMU; 3IMV; 3IMW; 3IPB; 3IPE; 3KGS; 3KGT; 3KGU; 3M1O; 3NEE; 3NEO; 3NES; 3NEX; 3NG5; 3OZK; 3OZL; 3P3R; 3P3S; 3P3T; 3P3U; 3SSG; 3TCT; 3TFB; 3U2I; 3U2J; 3W3B; 4ABQ; 4ABU; 4ABV; 4ABW; 4AC2; 4AC4; 4ACT; 4ANK; 4DER; 4DES; 4DET; 4DEU; 4DEW; 4FI6; 4FI7; 4FI8; 4HIQ; 4HIS; 4HJS; 4HJT; 4HJU; 4I85; 4I87; 4I89; 4IIZ; 4IK6; 4IK7; 4IKI; 4IKJ; 4IKK; 4IKL; 4KY2; 4L1S; 4L1T; 4MAS; 4MRB; 4MRC; 4N85; 4N86; 4N87; 5TTR
» More

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