PROSITE entry PS00770
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | AA_TRANSFER_CLASS_4 |
| Accession [info] | PS00770 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00618 |
Name and characterization of the entry
| Description [info] | Aminotransferases class-IV signature. |
| Pattern [info] |
E-x-[STAGCI]-x(2)-N-[LIVMFAC]-[FY]-x(6,12)-[LIVMFA]-x-T-x(6,8)-[LIVM]-x- [GS]-[LIVM]-x-[KR]. |
Numerical results [info]
| Total number of hits | 78 in 78 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 98.72 % |
| Recall (true positives / (true positives + false negatives)) | 87.50 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
ATNH_EMENI (Q5AV02), BCA1_SCHPO (O14370), BCA1_YEAST (P38891), BCA2_YEAST (P47176), BCAT1_ARATH (Q93Y32), BCAT1_HUMAN (P54687), BCAT1_HUMLU (K7QKH1), BCAT1_MOUSE (P24288), BCAT1_RAT (P54690), BCAT1_SHEEP (Q9GKM4), BCAT2_ARATH (Q9M439), BCAT2_BOVIN (Q5EA40), BCAT2_HUMAN (O15382), BCAT2_HUMLU (K7QHS5), BCAT2_MOUSE (O35855), BCAT2_PONAB (Q5REP0), BCAT2_RAT (O35854), BCAT3_ARATH (Q9M401), BCAT5_ARATH (Q9FYA6), BCAT6_ARATH (Q9LPM9), BCAT7_ARATH (Q9LPM8), BCAT_CAEEL (P54688), BCAT_DICDI (Q54N47), BCAT_MONBE (A9UZ24), BCAT_NEMVE (A7SLW1), DAAA_BACLI (P54692), DAAA_BACSU (O07597), DAAA_BACYM (P19938), DAAA_LYSSH (P54693), DAAA_STAAC (Q5HF24), DAAA_STAAM (P63511), DAAA_STAAN (P99090), DAAA_STAAR (Q6GFV1), DAAA_STAAS (Q6G8H7), DAAA_STAAW (Q8NW24), DAAA_STAEQ (Q5HNG0), DAAA_STAES (Q8CS41), DAAA_STAHA (P54694), ILVE1_BACSU (O31461), ILVE2_BACSU (P39576), ILVE_AQUAE (O67733), ILVE_ARCFU (O29329), ILVE_ECO57 (P0AB82), ILVE_ECOL6 (P0AB81), ILVE_ECOLI (P0AB80), ILVE_HAEIN (P54689), ILVE_HELPJ (Q9ZJF1), ILVE_HELPY (O26004), ILVE_METJA (Q58414), ILVE_METTH (O27481), ILVE_MYCLE (O32954), ILVE_MYCS2 (A0R066), ILVE_MYCTO (P9WQ74), ILVE_MYCTU (P9WQ75), ILVE_PSEAE (O86428), ILVE_RICBR (Q1RIJ2), ILVE_RICCN (Q92I26), ILVE_RICFE (Q4ULR3), ILVE_RICPR (O05970), ILVE_RICTY (Q9AKE5), ILVE_SALTI (P0A1A6), ILVE_SALTY (P0A1A5), ILVE_STAAC (Q5HIC1), ILVE_STAAM (P63512), ILVE_STAAN (P99138), ILVE_STAAR (Q6GJB4), ILVE_STAAS (Q6GBT3), ILVE_STAAW (P63513), ILVE_STAEQ (Q5HRJ8), ILVE_STAES (Q8CQ78), ILVE_STRCO (O86505), ILVE_SYNY3 (P54691), ILVE_THEMA (P74921), PABC_BACSU (P28821), PABC_ECOLI (P28305), PABC_VIBCH (Q9KQI0), PABC_VIBHA (Q56693)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
BALDT_MYCTU (Q79FW0), BCAL1_ARATH (Q8W0Z7), BCAL2_ARATH (Q9ASR4), BCAT4_ARATH (Q9LE06), DAAA_ARATH (Q8L493), DAAA_LISIN (Q92B90), DAAA_LISM4 (G2JZ74), DAAA_LISMF (Q71Z49), DAAA_LISMO (P0DJL9), PABC_YEAST (Q03266), TOXF_COCCA (Q9Y885)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
BCAT2_PIG (O19098) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
YJLD_BACSU (P80861) |
| PDB [Detailed view] |
67 PDB
1A3G; 1DAA; 1EKF; 1EKP; 1EKV; 1ET0; 1I1K; 1I1L; 1I1M; 1I2K; 1I2L; 1IYD; 1IYE; 1KT8; 1KTA; 2A1H; 2ABJ; 2COG; 2COI; 2COJ; 2DAA; 2HDK; 2HG8; 2HGW; 2HGX; 2HHF; 3CSW; 3DAA; 3DTF; 3DTG; 3HT5; 3JZ6; 3LQS; 4DAA; 5BWR; 5BWT; 5BWU; 5BWV; 5BWW; 5BWX; 5CR5; 5HNE; 5I5S; 5I5T; 5I5U; 5I5V; 5I5W; 5I5X; 5I5Y; 5I60; 5MPR; 5MQZ; 5MR0; 5U3F; 6NST; 6PRX; 7NTR; 7NWA; 7NWB; 7NWC; 7NWE; 7NWM; 7NXN; 7NXO; 7NY2; 7NY9; 7NYA » more |