Entry: PS00774

General information about the entry

Entry name [info] CHITINASE_19_2
Accession [info] PS00774
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); JUN-1994 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00620

Name and characterization of the entry

Description [info] Chitinases family 19 signature 2.
Pattern [info]
[LIVM]-[GSA]-F-x-[STAG](2)-[LIVMFY]-W-[FY]-W-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 53 in 53 different sequences
Number of true positive hits 53 in 53 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 22
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.81 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
53 sequences

AGI_URTDI   (P11218    ), CHI10_ORYSJ (Q5NB11    ), CHI11_ORYSJ (Q10S66    ), 
CHI12_ORYSJ (P25765    ), CHI1_GOSHI  (Q39799    ), CHI1_HORVU  (P11955    ), 
CHI1_ORYSJ  (Q42993    ), CHI1_SOLTU  (P52403    ), CHI1_THECC  (Q41596    ), 
CHI1_TOBAC  (P08252    ), CHI2_BRANA  (Q09023    ), CHI2_GOSHI  (Q39785    ), 
CHI2_HORVU  (P23951    ), CHI2_ORYSJ  (Q7DNA1    ), CHI2_PEA    (P21226    ), 
CHI2_SOLTU  (P52404    ), CHI2_TOBAC  (P24091    ), CHI3_ORYSJ  (P24626    ), 
CHI3_SOLTU  (P52405    ), CHI3_TOBAC  (P29059    ), CHI4_BRANA  (Q06209    ), 
CHI4_ORYSJ  (O04138    ), CHI4_PHAVU  (P27054    ), CHI4_SOLTU  (P52406    ), 
CHI58_ARATH (O24598    ), CHI59_ARATH (O24658    ), CHI5_ORYSJ  (Q7Y1Z0    ), 
CHI5_PHAVU  (P36361    ), CHI6_POPTR  (P16579    ), CHI8_ORYSJ  (Q7XCK6    ), 
CHI8_POPTR  (P16061    ), CHI9_ORYSJ  (Q688M5    ), CHIA_MAIZE  (P29022    ), 
CHIA_SECCE  (Q9FRV1    ), CHIA_SOLCI  (Q40114    ), CHIA_SOLLC  (Q05539    ), 
CHIB_ARATH  (P19171    ), CHIB_MAIZE  (P29023    ), CHIB_POPTR  (P29031    ), 
CHIB_SOLLC  (Q05540    ), CHIB_VITVI  (P51613    ), CHIC_SECCE  (Q9FRV0    ), 
CHIC_SOLLC  (Q05538    ), CHID_SOLLC  (Q05537    ), CHIP_TOBAC  (P17513    ), 
CHIQ_TOBAC  (P17514    ), CHIT_CARPA  (P85084    ), CHIT_DIOJA  (P80052    ), 
CHIT_PETHY  (P29021    ), CHIT_PHAVU  (P06215    ), CHIT_SOLTU  (P05315    ), 
CHIX_PEA    (P36907    ), MLX56_MORAL (A7XQ02    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

AMP1A_LYMAR (P86521    ), AMP_TRIKH   (P85966    ), CHI5_ARATH  (Q9M2U5    ), 
CHI60_ARATH (O24654    ), CHI61_ARATH (O22842    ), CHI62_ARATH (O22841    ), 
CHI6_ORYSJ  (Q6K8R2    ), CHI7_ORYSJ  (Q7Y1Z1    ), CHI_ARATH   (O24603    ), 
CTL1_ARATH  (Q9MA41    ), CTL2_ARATH  (Q9LSP9    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
22 sequences

CHI1_CAPAA  (P86078    ), CHI1_CAPCH  (P86081    ), CHI1_CASSA  (P29137    ), 
CHI1_GINBI  (P85343    ), CHI1_PEA    (P21225    ), CHI1_TAXBA  (P85337    ), 
CHI2_ARAHY  (Q06014    ), CHI2_CAPAA  (P86079    ), CHI2_CAPCH  (P86082    ), 
CHI2_TAXBA  (P85338    ), CHI3_ARAHY  (Q06015    ), CHI3_TAXBA  (P85355    ), 
CHI4_ARAHY  (Q06016    ), CHIA_ARAHY  (Q06012    ), CHIB_ARAHY  (Q06013    ), 
CHIB_PEA    (P21227    ), CHIC_POPTR  (P29032    ), CHIT_ACTCH  (P86473    ), 
CHIT_AVESA  (P86181    ), CHIT_TRISX  (C0HJM6    ), CHLY_CARPA  (P81241    ), 
IAMY_COILA  (P15326    )
» more

PDB
[Detailed view]
9 PDB

1CNS; 2BAA; 2DKV; 3CQL; 3IWR; 4DWX; 4DYG; 4J0L; 4MCK

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