Entry: PS00785

General information about the entry
Entry name 5_NUCLEOTIDASE_1
Accession number PS00785
Entry type PATTERN
Date DEC-1992 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00627
Name and characterization of the entry
Description5'-nucleotidase signature 1.
Pattern [LIVM]-x-[LIVM](2)-[HEA]-[TI]-x-D-x-H-[GSA]-x-[LIVMF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 29 hits in 28 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 26 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 93.10 %
  • Recall (true hits / (true hits + false negatives)): 93.10 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
5NTD_BOVIN  (Q05927), 5NTD_DIPOM  (P29240), 5NTD_HAEIN  (P44569), 
5NTD_HUMAN  (P21589), 5NTD_LUTLO  (Q9XZ43), 5NTD_MOUSE  (Q61503), 
5NTD_RAT    (P21588), 5NTD_TREPA  (O83142), 5NTD_VIBCH  (Q9KQ30), 
5NTD_VIBPA  (P22848), 5NTD_VIBVU  (Q8DFG4), APY_AEDAE   (P50635), 
APY_AEDAL   (E0D877), APY_TABYA   (B3A0N5), CPDB_ECOLI  (P08331), 
CPDB_HAEIN  (P44764), CPDB_SALTY  (P26265), CPDB_YEREN  (P53052), 
NTPES_BACSU (O34313), USHA_ECOLI  (P07024), USHA_SALPU  (Q9RN37), 
USHA_SALTY  (P06196), USHA_YERE8  (Q56878), V5NTD_GLOBB (P0DJJ5), 
V5NTD_GLOBR (B6EWW8), YEO3_SCHPO  (O13781)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
5NTD_BOOMI  (P52307), YHCR_BACSU  (P54602)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
V5NTD_CROAD (F8S0Z7)
False positive hits (sequences which do not belong to the set under consideration):
BENG_HETBN  (P0CC11), NBEL1_HUMAN (Q6ZS30)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1HO5; 1HP1; 1HPU; 1OI8; 1OID; 1OIE; 1USH; 2USH; 3ZTV; 3ZU0; 4H1S; 4H1Y; 4H2B; 4H2F; 4H2G; 4H2I;

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