Home ScanProsite ProRule Documents Downloads Links Funding
Entry: PS00794
General information about the entry
Entry nameHPPK
Accession numberPS00794
Entry typePATTERN
DateDEC-1992 (CREATED); JUL-1999 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00631
Name and characterization of the entry
Description7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature.
Pattern[KRHD]-x-[GA]-[PSAE]-R-x(2)-D-[LIV]-D-[LIVM](2).
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 29 hits in 29 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 29 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 85.29 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
FOL1_DICDI  (Q54YD9), FOL1_PNECA  (P29251), FOL1_YEAST  (P53848), 
FOLKE_LACLA (Q9CGE3), FOLKE_LACLM (Q8GJP4), FOLKP_CHLMU (P82602), 
FOLKP_CHLTR (O84619), HPPK_AQUAE  (O66550), HPPK_BACSU  (P29252), 
HPPK_CAMJE  (Q9PJ54), HPPK_ECOLI  (P26281), HPPK_HAEIN  (P43777), 
HPPK_HELPJ  (Q9ZM35), HPPK_HELPY  (O25680), HPPK_METEA  (P71512), 
HPPK_MYCBO  (P64144), HPPK_MYCLE  (O69528), HPPK_MYCTU  (P64143), 
HPPK_PSEAE  (Q9HV71), HPPK_PSEPU  (O87790), HPPK_STRP1  (P0C0G3), 
HPPK_STRP3  (P0DB10), HPPK_STRP6  (Q5XCA6), HPPK_STRP8  (Q8P151), 
HPPK_STRPQ  (P0DB11), HPPK_STRPY  (P0C0G2), HPPK_SYNY3  (P72736), 
SULD_STRPN  (P22291), SULD_STRR6  (P59657)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
FOL1_SCHPO  (Q4LB35), FOLKP_CHLCV (Q821E2), FOLKP_CHLPN (Q9Z7E8), 
HPPK_PORG3  (B2RI92), HPPK_PORGI  (P0C936)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		1CBK; 1DY3; 1EQ0; 1EQM; 1EX8; 1HKA; 1HQ2; 1IM6; 1Q0N; 1RAO; 1RB0; 1TMJ; 1TMM; 2F63; 2F65; 3HCX; 3HD1; 3HD2; 3HSD; 3HSG; 3HSJ; 3HSZ; 3HT0; 3IP0; 3KUE; 3KUG; 3KUH;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or