Entry: PS00800

General information about the entry

Entry name [info] PECTINESTERASE_1
Accession [info] PS00800
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); JUL-1999 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00413

Name and characterization of the entry

Description [info] Pectinesterase signature 1.
Pattern [info]
[GSTNP]-x(6)-[FYVHR]-[IVN]-[KEP]-x-G-[STIVKRQ]-Y-[DNQKRMV]-[EP]-x(3)-
[LIMVA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 39 in 39 different sequences
Number of true positive hits 37 in 37 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 60
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 94.87 %
Recall (true positives / (true positives + false negatives)) 38.14 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
37 sequences

PME12_ARATH (O48711), PME18_ARATH (Q1JPL7), PME19_ARATH (Q84JX1), 
PME1_ARATH  (Q43867), PME1_CITSI  (O04886), PME1_SOLLC  (P14280), 
PME21_SOLLC (P09607), PME22_ARATH (Q9M9W7), PME22_SOLLC (Q96575), 
PME23_ARATH (Q8GXA1), PME26_ARATH (Q9LUL8), PME2_ARATH  (Q42534), 
PME2_CITSI  (O04887), PME30_ARATH (Q3EAY9), PME32_ARATH (Q9LXK7), 
PME37_ARATH (Q5MFV6), PME3_ARATH  (O49006), PME3_CITSI  (P83948), 
PME3_PHAVU  (Q43111), PME3_SOLLC  (Q96576), PME42_ARATH (Q1PEC0), 
PME43_ARATH (O23447), PME58_ARATH (Q9FJ21), PME59_ARATH (Q9FHN5), 
PME5_ARATH  (Q5MFV8), PME60_ARATH (Q9FHN4), PMEB_DICD3  (Q47474), 
PMEU1_SOLLC (Q43143), PME_ASPAC   (Q12535), PME_ASPTU   (P17872), 
PME_BRACM   (Q42608), PME_BRANA   (P41510), PME_DAUCA   (P83218), 
PME_MEDSA   (Q42920), PME_PETIN   (Q43043), PME_PRUPE   (Q43062), 
YBHC_ECOLI  (P46130)
» More

UniProtKB/Swiss-Prot
False negative sequences
60 sequences

AL11A_OLEEU (D8VPP5), AL11B_OLEEU (B2VPR8), PME10_ARATH (O64479), 
PME11_ARATH (Q9SIJ9), PME13_ARATH (Q7Y201), PME14_ARATH (Q9ZQA4), 
PME15_ARATH (Q9ZQA3), PME16_ARATH (Q9SKX2), PME17_ARATH (O22149), 
PME1_FICPW  (P83947), PME20_ARATH (O22256), PME21_ARATH (Q8GX86), 
PME24_ARATH (Q9SG77), PME25_ARATH (Q94CB1), PME28_ARATH (Q3E8Z8), 
PME29_ARATH (Q4PSN0), PME31_ARATH (Q9LVQ0), PME33_ARATH (Q9STY3), 
PME34_ARATH (Q9M3B0), PME35_ARATH (Q9LYT5), PME36_ARATH (Q84R10), 
PME38_ARATH (O81320), PME39_ARATH (O81415), PME40_ARATH (O81301), 
PME41_ARATH (Q8RXK7), PME44_ARATH (Q9SMY7), PME45_ARATH (Q9SMY6), 
PME46_ARATH (Q9FF78), PME48_ARATH (Q9LY19), PME49_ARATH (Q9LY18), 
PME50_ARATH (Q9LY17), PME51_ARATH (Q9LXD9), PME53_ARATH (Q8VYZ3), 
PME55_ARATH (Q3E9D3), PME56_ARATH (Q4PT34), PME57_ARATH (Q9MAL0), 
PME61_ARATH (Q9FK05), PME62_ARATH (Q9FM79), PME63_ARATH (Q9FKF3), 
PME64_ARATH (Q8L7Q7), PME66_ARATH (Q4PSQ5), PME67_ARATH (Q9LSP1), 
PME68_ARATH (Q8LPF3), PME6_ARATH  (O49298), PME7_ARATH  (Q9SRX4), 
PME8_ARATH  (O23038), PMEA_ASPFC  (B0Y9F9), PMEA_ASPFN  (B8NPS7), 
PMEA_ASPFU  (Q4WBT5), PMEA_ASPNC  (A2QK82), PMEA_ASPOR  (Q2UBD9), 
PMEA_DICCH  (P0C1A8), PMEA_DICD3  (P0C1A9), PMEA_EMENI  (Q5B7U0), 
PMEA_NEOFI  (A1DBT4), PMEB_PECSS  (P55743), PME_ACTDE   (P85076), 
PME_RALSL   (P24791), PME_RALSO   (P58601), PPME1_ARATH (Q84WM7)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

PME_CAPAA   (P86075), PME_CAPCH   (P86085)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

DHK1_STRVN  (P16542), SYE_LEUMM   (Q03ZR1)

		
PDB
[Detailed view]
3 PDB

1GQ8; 1XG2; 3GRH

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