Entry: PS00825

General information about the entry
Entry name EF1BD_2
Accession number PS00825
Entry type PATTERN
Date OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00648
Name and characterization of the entry
DescriptionElongation factor 1 beta/beta'/delta chain signature 2.
Pattern [IV]-Q-S-x-D-[LIVM]-x-A-[FWM]-[DNQS]-K-[LIVM].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 38 hits in 38 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 38 hits in 38 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
EF1B1_ARATH (Q84WM9), EF1B1_CAEEL (P34460), EF1B2_ARATH (Q9SCX3), 
EF1B2_BOMMO (P29522), EF1B2_CAEEL (Q9U2H9), EF1B_ARTSA  (P12262), 
EF1B_BOVIN  (Q5E983), EF1B_CANAW  (P78590), EF1B_CHICK  (Q9YGQ1), 
EF1B_DICDI  (Q9GRF8), EF1B_DROME  (O96827), EF1B_HUMAN  (P24534), 
EF1B_MOUSE  (O70251), EF1B_ORYSJ  (P29545), EF1B_PIG    (P29412), 
EF1B_RABIT  (P34826), EF1B_SCHPO  (O74173), EF1B_TRYCR  (P34827), 
EF1B_WHEAT  (P29546), EF1B_XENLA  (P30151), EF1B_XENTR  (Q6DET9), 
EF1B_YEAST  (P32471), EF1D1_ARATH (P48006), EF1D1_ORYSJ (Q40680), 
EF1D2_ARATH (Q9SI20), EF1D2_ORYSJ (Q40682), EF1D_ARTSA  (P32192), 
EF1D_BETVU  (O81918), EF1D_BOVIN  (A5D989), EF1D_DROME  (Q9VL18), 
EF1D_HUMAN  (P29692), EF1D_MACFA  (Q4R3D4), EF1D_MOUSE  (P57776), 
EF1D_PIMBR  (P93447), EF1D_RABIT  (P53787), EF1D_RAT    (Q68FR9), 
EF1D_SHEEP  (Q717R8), EF1D_XENLA  (P29693)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
EF1D_POPEU  (P84973), IMPL_MOUSE  (P83891)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1B64; 1F60; 1G7C; 1IJE; 1IJF;

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