Entry: PS00862

General information about the entry

Entry name [info] OX2_COVAL_FAD
Accession [info] PS00862
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00674

Name and characterization of the entry

Description [info] Oxygen oxidoreductases covalent FAD-binding site.
Pattern [info]
P-x(7)-{L}-x(2)-[DE]-[LIVM]-x(3)-[LIVM]-x(9,12)-[LIVM]-x(3)-[GSA]-
[GSTCHRQ]-G-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 31 in 31 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.94 %
Recall (true positives / (true positives + false negatives)) 64.58 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] FAD_binding at position 15
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
31 sequences

ALO_ASHGO   (Q752Y3    ), ALO_CANAL   (O93852    ), ALO_CANGA   (Q6FS20    ), 
ALO_DEBHA   (Q6BZA0    ), ALO_KLULA   (Q6CSY3    ), ALO_NEUCR   (Q7SGY1    ), 
ALO_YEAST   (P54783    ), APF9_GIBF5  (S0DL65    ), CKX1_ARATH  (O22213    ), 
CKX1_MAIZE  (Q9T0N8    ), CKX1_ORYSJ  (Q0JQ12    ), CKX2_ARATH  (Q9FUJ3    ), 
CKX3_ARATH  (Q9LTS3    ), CKX4_ORYSJ  (Q5JLP4    ), CKX5_ARATH  (Q67YU0    ), 
CKX5_ORYSJ  (Q5ZAY9    ), CKX6_ORYSJ  (Q6YW51    ), CKX7_ORYSJ  (Q6YW50    ), 
CKX9_ORYSJ  (Q75K78    ), FAS5_RHOFA  (P46377    ), GGLO_BOVIN  (Q3ZC33    ), 
GGLO_MOUSE  (P58710    ), GGLO_PIG    (Q8HXW0    ), GGLO_RAT    (P10867    ), 
GGLO_SCYTO  (Q90YK3    ), GULDH_MYCTO (P9WIT2    ), GULDH_MYCTU (P9WIT3    ), 
HDNO_ARTOX  (P08159    ), MCRA_STRLA  (P43485    ), RETO_ESCCA  (P30986    ), 
RETO_PAPSO  (P93479    )
» more

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

A2372_ARTBC (D4B1P2    ), A2478_ARTBC (D4B1Z7    ), A7056_ARTBC (D4AS41    ), 
AFOF_EMENI  (Q5BEJ5    ), ALO_SCHPO   (Q9HDX8    ), ALO_YARLI   (Q6CG88    ), 
CKX10_ORYSJ (Q5Z620    ), CKX11_ORYSJ (Q6Z955    ), CKX2_ORYSJ  (Q4ADV8    ), 
CKX3_ORYSJ  (Q8LNV6    ), CKX4_ARATH  (Q9FUJ2    ), CKX6_ARATH  (Q9LY71    ), 
CKX7_ARATH  (Q9FUJ1    ), CKX8_ORYSI  (A2XVN3    ), CKX8_ORYSJ  (A3AVP1    ), 
XYOA_STRCO  (Q9ZBU1    ), XYOA_STRSI  (Q9KX73    )
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

ATG2A_HUMAN (Q2TAZ0    ), DNJ21_ARATH (Q0WT48    )

		
PDB
[Detailed view]
23 PDB

1W1O; 1W1Q; 1W1R; 1W1S; 2QKN; 2QPM; 3BW7; 3C0P; 3D2D; 3D2H; 3D2J; 3DQ0; 3FW8; 3FW9; 3FWA; 3GSY; 3KJM; 3S1C; 3S1D; 3S1E; 3S1F; 4EC3; 4PZF
» more

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