Entry: PS00862

General information about the entry

Entry name [info] OX2_COVAL_FAD
Accession [info] PS00862
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00674

Name and characterization of the entry

Description [info] Oxygen oxidoreductases covalent FAD-binding site.
Pattern [info]
P-x(7)-{L}-x(2)-[DE]-[LIVM]-x(3)-[LIVM]-x(9,12)-[LIVM]-x(3)-[GSA]-
[GSTCHRQ]-G-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 32 in 32 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 13
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.75 %
Recall (true positives / (true positives + false negatives)) 69.77 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] FAD_binding at position 15
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

ALO_ASHGO   (Q752Y3), ALO_CANAL   (O93852), ALO_CANGA   (Q6FS20), 
ALO_DEBHA   (Q6BZA0), ALO_KLULA   (Q6CSY3), ALO_NEUCR   (Q7SGY1), 
ALO_YEAST   (P54783), CKX1_ARATH  (O22213), CKX1_MAIZE  (Q9T0N8), 
CKX1_ORYSJ  (Q0JQ12), CKX2_ARATH  (Q9FUJ3), CKX3_ARATH  (Q9LTS3), 
CKX4_ORYSJ  (Q5JLP4), CKX5_ARATH  (Q67YU0), CKX5_ORYSJ  (Q5ZAY9), 
CKX6_ORYSJ  (Q6YW51), CKX7_ORYSJ  (Q6YW50), CKX9_ORYSJ  (Q75K78), 
FAS5_RHOFA  (P46377), GGLO_BOVIN  (Q3ZC33), GGLO_MOUSE  (P58710), 
GGLO_PIG    (Q8HXW0), GGLO_RAT    (P10867), GGLO_SCYTO  (Q90YK3), 
GULDH_MYCTO (P9WIT2), GULDH_MYCTU (P9WIT3), HDNO_ARTOX  (P08159), 
MCRA_STRLA  (P43485), RETO_ESCCA  (P30986), RETO_PAPSO  (P93479)
» More

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ALO_SCHPO   (Q9HDX8), ALO_YARLI   (Q6CG88), CKX10_ORYSJ (Q5Z620), 
CKX11_ORYSJ (Q6Z955), CKX2_ORYSJ  (Q4ADV8), CKX3_ORYSJ  (Q8LNV6), 
CKX4_ARATH  (Q9FUJ2), CKX6_ARATH  (Q9LY71), CKX7_ARATH  (Q9FUJ1), 
CKX8_ORYSI  (A2XVN3), CKX8_ORYSJ  (A3AVP1), XYOA_STRCO  (Q9ZBU1), 
XYOA_STRSI  (Q9KX73)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

ATG2A_HUMAN (Q2TAZ0), DNJ21_ARATH (Q0WT48)

		
PDB
[Detailed view]
23 PDB

1W1O; 1W1Q; 1W1R; 1W1S; 2QKN; 2QPM; 3BW7; 3C0P; 3D2D; 3D2H; 3D2J; 3DQ0; 3FW8; 3FW9; 3FWA; 3GSY; 3KJM; 3S1C; 3S1D; 3S1E; 3S1F; 4EC3; 4PZF
» More

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