Entry: PS00862

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General information about the entry

Entry name [info] OX2_COVAL_FAD
Accession [info] PS00862
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00674

Name and characterization of the entry

Description [info] Oxygen oxidoreductases covalent FAD-binding site.
Pattern [info]
P-x(7)-{L}-x(2)-[DE]-[LIVM]-x(3)-[LIVM]-x(9,12)-[LIVM]-x(3)-[GSA]-
[GSTCHRQ]-G-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 31 in 31 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 13
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.77 %
Recall (true positives / (true positives + false negatives)) 69.77 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] FAD_binding at position 15
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

ALO_ASHGO   (Q752Y3), ALO_CANAL   (O93852), ALO_CANGA   (Q6FS20), 
ALO_DEBHA   (Q6BZA0), ALO_KLULA   (Q6CSY3), ALO_NEUCR   (Q7SGY1), 
ALO_YEAST   (P54783), CKX1_ARATH  (O22213), CKX1_MAIZE  (Q9T0N8), 
CKX1_ORYSJ  (Q0JQ12), CKX2_ARATH  (Q9FUJ3), CKX3_ARATH  (Q9LTS3), 
CKX4_ORYSJ  (Q5JLP4), CKX5_ARATH  (Q67YU0), CKX5_ORYSJ  (Q5ZAY9), 
CKX6_ORYSJ  (Q6YW51), CKX7_ORYSJ  (Q6YW50), CKX9_ORYSJ  (Q75K78), 
FAS5_RHOFA  (P46377), GGLO_BOVIN  (Q3ZC33), GGLO_MOUSE  (P58710), 
GGLO_PIG    (Q8HXW0), GGLO_RAT    (P10867), GGLO_SCYTO  (Q90YK3), 
GULDH_MYCTO (P9WIT2), GULDH_MYCTU (P9WIT3), HDNO_ARTOX  (P08159), 
MCRA_STRLA  (P43485), RETO_ESCCA  (P30986), RETO_PAPSO  (P93479)
» More

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ALO_SCHPO   (Q9HDX8), ALO_YARLI   (Q6CG88), CKX10_ORYSJ (Q5Z620), 
CKX11_ORYSJ (Q6Z955), CKX2_ORYSJ  (Q4ADV8), CKX3_ORYSJ  (Q8LNV6), 
CKX4_ARATH  (Q9FUJ2), CKX6_ARATH  (Q9LY71), CKX7_ARATH  (Q9FUJ1), 
CKX8_ORYSI  (A2XVN3), CKX8_ORYSJ  (A3AVP1), XYOA_STRCO  (Q9ZBU1), 
XYOA_STRSI  (Q9KX73)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ATG2A_HUMAN (Q2TAZ0)

		
PDB
[Detailed view]
23 PDB

1W1O; 1W1Q; 1W1R; 1W1S; 2QKN; 2QPM; 3BW7; 3C0P; 3D2D; 3D2H; 3D2J; 3DQ0; 3FW8; 3FW9; 3FWA; 3GSY; 3KJM; 3S1C; 3S1D; 3S1E; 3S1F; 4EC3; 4PZF
» More

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