Entry: PS00866

Forthcoming changes to the profile format
General information about the entry

Entry name [info] CPSASE_1
Accession [info] PS00866
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); JUL-1998 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00676

Name and characterization of the entry

Description [info] Carbamoyl-phosphate synthase subdomain signature 1.
Pattern [info]
[FYV]-[PS]-[LIVMC]-[LIVMA]-[LIVM]-[KR]-[PSA]-[STA]-x(3)-[SG]-G-x-[AG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 491 in 303 different sequences
Number of true positive hits 490 in 302 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 24
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.80 %
Recall (true positives / (true positives + false negatives)) 95.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
302 sequences

2OCS_HYDTT  (D3DJ42), ACACA_BOVIN (Q9TTS3), ACACA_HUMAN (Q13085), 
ACACA_MOUSE (Q5SWU9), ACACA_RAT   (P11497), ACACA_SHEEP (Q28559), 
ACACB_HUMAN (O00763), ACAC_CHICK  (P11029), ACAC_SCHPO  (P78820), 
ACAC_YEAST  (Q00955), ACCC1_BACSU (P49787), ACCC1_POPTR (B9HBA8), 
ACCC2_BACSU (O34544), ACCC2_POPTR (B9N843), ACCC_ALLVD  (O52058), 
ACCC_ARATH  (O04983), ACCC_BACHD  (Q9KDS9), ACCC_ECO57  (Q8X9B6), 
ACCC_ECOLI  (P24182), ACCC_HAEIN  (P43873), ACCC_NOSS1  (Q06862), 
ACCC_PSEAE  (P37798), BCCA_MYCBO  (P0A509), BCCA_MYCLE  (P46392), 
BCCA_MYCTO  (P9WPQ2), BCCA_MYCTU  (P9WPQ3), CARB1_AQUAE (O67869), 
CARB1_METJA (Q58773), CARB1_METKA (Q8TWX0), CARB2_AQUAE (O67233), 
CARB2_METJA (Q58776), CARB2_METKA (Q8TUT7), CARB_ACIC5  (C1F1S6), 
CARB_AGRT5  (Q8UDE9), CARB_ARATH  (Q42601), CARB_ARCFU  (O28994), 
CARB_ARTAT  (A1R6Z3), CARB_ARTCA  (B8H8U5), CARB_ARTS2  (A0JX72), 
CARB_ASHGO  (Q75D66), CARB_BACAA  (C3P656), CARB_BACAC  (C3L740), 
CARB_BACAH  (A0RHQ8), CARB_BACAN  (Q81WF2), CARB_BACC0  (B7JJX3), 
CARB_BACC1  (Q732I3), CARB_BACC2  (B7IUP6), CARB_BACC3  (C1EPQ0), 
CARB_BACC4  (B7H6M2), CARB_BACC7  (B7HLM0), CARB_BACCL  (P46537), 
CARB_BACCN  (A7GRL1), CARB_BACCQ  (B9IVW3), CARB_BACCR  (Q819S3), 
CARB_BACCZ  (Q636E0), CARB_BACHD  (Q9K9V9), CARB_BACHK  (Q6HES8), 
CARB_BACSU  (P25994), CARB_BACWK  (A9VTC6), CARB_BEUC1  (C5C687), 
CARB_BIFA0  (B8DTW3), CARB_BIFAA  (A1A0T4), CARB_BIFLD  (B3DQ32), 
CARB_BIFLO  (Q8G815), CARB_BIFLS  (B7GPW2), CARB_BRUME  (Q8YIC2), 
CARB_BRUSU  (Q8FZJ3), CARB_BUCAI  (P57244), CARB_BUCAP  (Q8K9Z7), 
CARB_CAMJE  (Q9PIL7), CARB_CLAM3  (A5CRX5), CARB_CLAMS  (B0REV9), 
CARB_CLOAB  (Q97FT3), CARB_CLOB8  (A6LPD9), CARB_CLOBA  (B2UX86), 
CARB_CLOBB  (B2THH3), CARB_CLOBJ  (C1FNY3), CARB_CLOBL  (A7GE89), 
CARB_CLOBM  (B1KT07), CARB_CLOP1  (Q0TM79), CARB_CLOPE  (Q8XHB3), 
CARB_CLOPH  (A9KI94), CARB_CLOPS  (Q0SPY4), CARB_COREF  (Q8FT42), 
CARB_CORGL  (P58939), CARB_DEIGD  (Q1IWM0), CARB_DESAP  (B1I4M8), 
CARB_ECO57  (P63737), CARB_ECOL6  (Q8FLB0), CARB_ECOLI  (P00968), 
CARB_ENTFA  (Q834E2), CARB_EUBR3  (C4ZEK2), CARB_EXIS2  (B1YIR9), 
CARB_EXISA  (C4L5W3), CARB_FUSNN  (Q8RG86), CARB_GEMAT  (C1A4I5), 
CARB_GEOSE  (O50302), CARB_HAEDU  (Q7VP67), CARB_HALER  (Q8RSS3), 
CARB_HALOH  (B8D1H3), CARB_HALSA  (Q9HP43), CARB_HYPBU  (A2BJL3), 
CARB_KINRD  (A6WCC6), CARB_KOCRD  (B2GI87), CARB_KORVE  (Q1IPK2), 
CARB_LACAC  (Q5FJC0), CARB_LACC3  (Q038Z2), CARB_LACCB  (B3WEF5), 
CARB_LACDB  (Q047M8), CARB_LACF3  (B2GD06), CARB_LACH4  (A8YVZ3), 
CARB_LACJO  (Q74J34), CARB_LACLA  (Q9CFV2), CARB_LACLM  (O32771), 
CARB_LACLS  (Q02YG5), CARB_LACPL  (P77886), CARB_LACRD  (A5VHN6), 
CARB_LACRJ  (B2G564), CARB_LACS1  (Q1WVA9), CARB_LACSS  (Q38X24), 
CARB_LEPIC  (Q72NF1), CARB_LEPIN  (Q8F832), CARB_LEUCK  (B1MZ74), 
CARB_LEUMM  (Q03WW7), CARB_LISIN  (Q92AH3), CARB_LISMC  (C1KWD4), 
CARB_LISMF  (Q71YI1), CARB_LISMH  (B8DDR7), CARB_LISMO  (Q8Y665), 
CARB_LISW6  (A0AJU0), CARB_LYSSC  (B1HQC1), CARB_MACCJ  (B9EB69), 
CARB_METAC  (Q8TNY4), CARB_METB6  (A7I6J1), CARB_METBA  (P13258), 
CARB_METBF  (Q469Z7), CARB_METHJ  (Q2FLD9), CARB_METLZ  (A2SQ53), 
CARB_METMA  (P58944), CARB_METMJ  (A3CU73), CARB_METPE  (B8GEA3), 
CARB_METS3  (A5UKG5), CARB_METTH  (O27077), CARB_METTP  (A0B8K9), 
CARB_MICLC  (C5CCF1), CARB_MYCBO  (Q7U054), CARB_MYCGI  (A4TBY6), 
CARB_MYCLE  (Q9CCR2), CARB_MYCSJ  (A3PZ65), CARB_MYCSK  (A1UFK4), 
CARB_MYCSS  (Q1B9F9), CARB_MYCTO  (P9WPK2), CARB_MYCTU  (P9WPK3), 
CARB_MYCVP  (A1T8H1), CARB_MYXXD  (Q1D6Y8), CARB_NATTJ  (B2A170), 
CARB_NEIGO  (Q59599), CARB_NEIMA  (Q9JW02), CARB_NEIMB  (Q9JXW8), 
CARB_NOSS1  (Q8YQL2), CARB_OENOB  (Q04H29), CARB_ORYSJ  (B9EXM2), 
CARB_PASMU  (Q9CKV0), CARB_PEDPA  (Q03HB0), CARB_PELTS  (A5D508), 
CARB_PROAC  (Q6A914), CARB_PSEAE  (P38100), CARB_PSEPK  (Q88DU6), 
CARB_PSESM  (Q87WP4), CARB_PYRFU  (Q8U085), CARB_RALSO  (Q8XZ83), 
CARB_RENSM  (A9WSA8), CARB_RHILO  (Q98I87), CARB_RHIME  (Q92PZ4), 
CARB_RUBXD  (Q1AVY9), CARB_SALTI  (Q8Z9L7), CARB_SALTY  (P14846), 
CARB_SCHPO  (O94313), CARB_SHIFL  (P63738), CARB_STAA1  (A7X1F4), 
CARB_STAA2  (A6U122), CARB_STAA3  (Q2FHN5), CARB_STAA8  (Q2FZ72), 
CARB_STAA9  (A5IS88), CARB_STAAB  (Q2YXG5), CARB_STAAC  (Q5HGM9), 
CARB_STAAE  (A6QGA4), CARB_STAAM  (P63739), CARB_STAAN  (P63740), 
CARB_STAAR  (Q6GHN2), CARB_STAAS  (Q6GA10), CARB_STAAT  (A8Z3P0), 
CARB_STAAW  (P58940), CARB_STACT  (B9DPN2), CARB_STAEQ  (Q5HPY8), 
CARB_STAES  (Q8CPJ4), CARB_STAHJ  (Q4L5Q5), CARB_STAS1  (Q49WY4), 
CARB_STRA1  (Q3K150), CARB_STRA3  (Q8E5F5), CARB_STRA5  (Q8DZQ7), 
CARB_STRAW  (Q827Q7), CARB_STRCO  (Q9KXR6), CARB_STRE4  (C0M756), 
CARB_STRGC  (A8AX83), CARB_STRGG  (B1W463), CARB_STRMU  (Q8DUP3), 
CARB_STRP1  (Q9A0C6), CARB_STRP2  (Q04K48), CARB_STRP3  (P0DA14), 
CARB_STRP4  (B5E512), CARB_STRP6  (Q5XCR6), CARB_STRP7  (C1C7Q3), 
CARB_STRP8  (P58941), CARB_STRPG  (A2RF60), CARB_STRPI  (B1IC65), 
CARB_STRPJ  (B8ZJT9), CARB_STRPN  (Q97QE4), CARB_STRPQ  (P0DA15), 
CARB_STRPS  (B2IQ67), CARB_STRPZ  (B5XKW2), CARB_STRR6  (Q8CWR0), 
CARB_STRS7  (C0MEH1), CARB_STRSV  (A3CNI5), CARB_STRT1  (Q5M0W9), 
CARB_STRT2  (Q5M5F6), CARB_STRTD  (Q03LT8), CARB_STRU0  (B9DRV7), 
CARB_STRZJ  (C1CEM9), CARB_STRZP  (C1CL09), CARB_STRZT  (C1CR31), 
CARB_SULAC  (Q4J8E8), CARB_SULTO  (Q970U7), CARB_SYMTH  (Q67Q54), 
CARB_SYNY3  (Q55756), CARB_THELT  (A8F453), CARB_THEMA  (Q9WZ27), 
CARB_THENN  (B9KB91), CARB_THEP1  (A5IJL8), CARB_THEP3  (B0KBW4), 
CARB_THEPX  (B0K4D7), CARB_THERP  (B9KXM5), CARB_THESQ  (B1L8T8), 
CARB_THET2  (P96495), CARB_THET8  (Q5SKN1), CARB_THETN  (Q8RBK0), 
CARB_TRICU  (P46056), CARB_VIBCH  (Q9KPH9), CARB_VIBPA  (Q87SF3), 
CARB_VIBVU  (Q8DEM2), CARB_VIBVY  (Q7MNU0), CARB_XANAC  (P58942), 
CARB_XANCP  (P58943), CARB_XYLFA  (Q9PEC1), CARB_XYLFT  (Q87EB8), 
CARB_YEAST  (P03965), CARB_YERPE  (Q8ZIL4), CARB_ZYMMO  (O50236), 
CARY_BACHD  (Q9K8V7), CARY_BACSU  (P18185), CARY_GEOSE  (Q9ZB63), 
CARY_LACPL  (Q9RLS9), CPSM_HUMAN  (P31327), CPSM_LITCT  (Q91293), 
CPSM_MOUSE  (Q8C196), CPSM_RAT    (P07756), DUR1_LACKL  (A5H0J2), 
DUR1_YEAST  (P32528), HFA1_YEAS1  (B3LM95), HFA1_YEAS2  (C7GRE4), 
HFA1_YEAS7  (A6ZMR9), HFA1_YEAS8  (C8ZF72), HFA1_YEAST  (P32874), 
LAMA_EMENI  (P38095), MCCA_ARATH  (Q42523), MCCA_ORYSJ  (Q2QMG2), 
MCCA_SOYBN  (Q42777), PCCA_CAEBR  (Q612F5), PCCA_CAEEL  (Q19842), 
PCCA_HUMAN  (P05165), PCCA_MOUSE  (Q91ZA3), PCCA_RAT    (P14882), 
PYC1_YEAST  (P11154), PYC2_YEAST  (P32327), PYCA_ARCFU  (O30019), 
PYCA_METJA  (Q58626), PYCA_METTH  (O27939), PYC_ASPNG   (Q9HES8), 
PYC_ASPTE   (O93918), PYC_ASPTN   (Q0CLK1), PYC_BACSU   (Q9KWU4), 
PYC_PICAN   (Q8X1T3), PYC_PICPA   (P78992), PYR1_DICDI  (P20054), 
PYR1_DROME  (P05990), PYR1_EMENI  (O93937), PYR1_HUMAN  (P27708), 
PYR1_MESAU  (P08955), PYR1_MOUSE  (B2RQC6), PYR1_SCHPO  (Q09794), 
PYR1_SQUAC  (Q91437), PYR1_YEAST  (P07259)
» More

UniProtKB/Swiss-Prot
False negative sequences
24 sequences

ACAC_DICDI  (Q54J08), ACC1_ARATH  (Q38970), ACC1_ORYSJ  (Q8S6N5), 
ACC2_ARATH  (F4I1L3), ACC2_ORYSJ  (B9FK36), CARB_BUCBP  (P59448), 
CARB_CAUCR  (Q9A4D6), CARB_DEIDV  (C1CXR4), CARB_DEIRA  (Q9RWK0), 
CARB_HELPJ  (Q9ZKT2), CARB_HELPY  (O25577), CARB_PYRAE  (Q8ZY48), 
CARB_RHOBA  (Q7UJ58), CARB_SULIA  (C3N664), CARB_SULIK  (C4KHM7), 
CARB_SULIL  (C3MQE3), CARB_SULIM  (C3MW21), CARB_SULIN  (C3NH23), 
CARB_SULIY  (C3NEM0), CARB_SULSO  (Q59969), CARB_THEAC  (Q9HK17), 
CARB_THEVO  (Q97AJ3), MCCA_RAT    (Q5I0C3), PYC1_CAEEL  (O17732)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

ACCC_POPEU  (P84546)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PURT_DECAR  (Q47A50)

		
PDB
[Detailed view]
39 PDB

1A9X; 1BXR; 1C30; 1C3O; 1CE8; 1CS0; 1DV2; 1JDB; 1KEE; 1M6V; 1T36; 1W93; 1W96; 2CQY; 2HJW; 2J9G; 2V58; 2V59; 2V5A; 2VQD; 2W6M; 2W6N; 2W6O; 2W6P; 2W6Q; 2W6Z; 2W70; 2W71; 2YL2; 3G8C; 3G8D; 3JRW; 3JRX; 3JZF; 3JZI; 3RUP; 3RV3; 3RV4; 4HQ6
» More

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