Entry: PS00867

General information about the entry

Entry name [info] CPSASE_2
Accession [info] PS00867
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00676

Name and characterization of the entry

Description [info] Carbamoyl-phosphate synthase subdomain signature 2.
Pattern [info]
[LIVMF]-[LIMN]-E-[LIVMCA]-N-[PATLIVM]-[KR]-[LIVMSTAC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 698 in 461 different sequences
Number of true positive hits 570 in 333 different sequences
Number of 'unknown' hits 1
Number of false positive hits 127 in 127 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 81.78 %
Recall (true positives / (true positives + false negatives)) 99.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
333 sequences

2OCS_HYDTT  (D3DJ42    ), ACACA_BOVIN (Q9TTS3    ), ACACA_HUMAN (Q13085    ), 
ACACA_MOUSE (Q5SWU9    ), ACACA_RAT   (P11497    ), ACACA_SHEEP (Q28559    ), 
ACACB_HUMAN (O00763    ), ACACB_MOUSE (E9Q4Z2    ), ACAC_CHICK  (P11029    ), 
ACAC_DICDI  (Q54J08    ), ACAC_SCHPO  (P78820    ), ACAC_YEAST  (Q00955    ), 
ACC1_ARATH  (Q38970    ), ACC1_ORYSJ  (Q8S6N5    ), ACC2_ARATH  (F4I1L3    ), 
ACC2_ORYSJ  (B9FK36    ), ACCC1_BACSU (P49787    ), ACCC1_POPTR (B9HBA8    ), 
ACCC2_BACSU (O34544    ), ACCC2_POPTR (B9N843    ), ACCC_ALLVD  (O52058    ), 
ACCC_ARATH  (O04983    ), ACCC_BACHD  (Q9KDS9    ), ACCC_ECO57  (Q8X9B6    ), 
ACCC_ECOLI  (P24182    ), ACCC_HAEIN  (P43873    ), ACCC_NOSS1  (Q06862    ), 
ACCC_PSEAE  (P37798    ), BCCA_MYCBO  (P0A509    ), BCCA_MYCLE  (P46392    ), 
BCCA_MYCTO  (P9WPQ2    ), BCCA_MYCTU  (P9WPQ3    ), CARB1_AQUAE (O67869    ), 
CARB1_METJA (Q58773    ), CARB1_METKA (Q8TWX0    ), CARB2_AQUAE (O67233    ), 
CARB2_METJA (Q58776    ), CARB2_METKA (Q8TUT7    ), CARB_ACIC5  (C1F1S6    ), 
CARB_AGARV  (C4ZEK2    ), CARB_AGRFC  (Q8UDE9    ), CARB_ARATH  (Q42601    ), 
CARB_ARCFU  (O28994    ), CARB_ARTAT  (A1R6Z3    ), CARB_ARTS2  (A0JX72    ), 
CARB_ASHGO  (Q75D66    ), CARB_BACAA  (C3P656    ), CARB_BACAC  (C3L740    ), 
CARB_BACAH  (A0RHQ8    ), CARB_BACAN  (Q81WF2    ), CARB_BACC0  (B7JJX3    ), 
CARB_BACC1  (Q732I3    ), CARB_BACC2  (B7IUP6    ), CARB_BACC3  (C1EPQ0    ), 
CARB_BACC4  (B7H6M2    ), CARB_BACC7  (B7HLM0    ), CARB_BACCL  (P46537    ), 
CARB_BACCN  (A7GRL1    ), CARB_BACCQ  (B9IVW3    ), CARB_BACCR  (Q819S3    ), 
CARB_BACCZ  (Q636E0    ), CARB_BACHD  (Q9K9V9    ), CARB_BACHK  (Q6HES8    ), 
CARB_BACSU  (P25994    ), CARB_BACWK  (A9VTC6    ), CARB_BEUC1  (C5C687    ), 
CARB_BIFA0  (B8DTW3    ), CARB_BIFAA  (A1A0T4    ), CARB_BIFLD  (B3DQ32    ), 
CARB_BIFLO  (Q8G815    ), CARB_BIFLS  (B7GPW2    ), CARB_BRUME  (Q8YIC2    ), 
CARB_BRUSU  (Q8FZJ3    ), CARB_BUCAI  (P57244    ), CARB_BUCAP  (Q8K9Z7    ), 
CARB_BUCBP  (P59448    ), CARB_CALS4  (Q8RBK0    ), CARB_CAMJE  (Q9PIL7    ), 
CARB_CAUCR  (Q9A4D6    ), CARB_CLAM3  (A5CRX5    ), CARB_CLAMS  (B0REV9    ), 
CARB_CLOAB  (Q97FT3    ), CARB_CLOB8  (A6LPD9    ), CARB_CLOBA  (B2UX86    ), 
CARB_CLOBB  (B2THH3    ), CARB_CLOBJ  (C1FNY3    ), CARB_CLOBL  (A7GE89    ), 
CARB_CLOBM  (B1KT07    ), CARB_CLOP1  (Q0TM79    ), CARB_CLOPE  (Q8XHB3    ), 
CARB_CLOPH  (A9KI94    ), CARB_CLOPS  (Q0SPY4    ), CARB_COREF  (Q8FT42    ), 
CARB_CORGL  (P58939    ), CARB_DEIDV  (C1CXR4    ), CARB_DEIGD  (Q1IWM0    ), 
CARB_DEIRA  (Q9RWK0    ), CARB_DESAP  (B1I4M8    ), CARB_ECO57  (P63737    ), 
CARB_ECOL6  (Q8FLB0    ), CARB_ECOLI  (P00968    ), CARB_ENTFA  (Q834E2    ), 
CARB_EXIS2  (B1YIR9    ), CARB_EXISA  (C4L5W3    ), CARB_FUSNN  (Q8RG86    ), 
CARB_GEMAT  (C1A4I5    ), CARB_GEOSE  (O50302    ), CARB_HAEDU  (Q7VP67    ), 
CARB_HALER  (Q8RSS3    ), CARB_HALOH  (B8D1H3    ), CARB_HALSA  (Q9HP43    ), 
CARB_HELPJ  (Q9ZKT2    ), CARB_HELPY  (O25577    ), CARB_KINRD  (A6WCC6    ), 
CARB_KOCRD  (B2GI87    ), CARB_KORVE  (Q1IPK2    ), CARB_LACAC  (Q5FJC0    ), 
CARB_LACC3  (Q038Z2    ), CARB_LACCB  (B3WEF5    ), CARB_LACDB  (Q047M8    ), 
CARB_LACF3  (B2GD06    ), CARB_LACH4  (A8YVZ3    ), CARB_LACJO  (Q74J34    ), 
CARB_LACLA  (Q9CFV2    ), CARB_LACLM  (O32771    ), CARB_LACLS  (Q02YG5    ), 
CARB_LACPL  (P77886    ), CARB_LACRD  (A5VHN6    ), CARB_LACRJ  (B2G564    ), 
CARB_LACS1  (Q1WVA9    ), CARB_LACSS  (Q38X24    ), CARB_LEPIC  (Q72NF1    ), 
CARB_LEPIN  (Q8F832    ), CARB_LEUCK  (B1MZ74    ), CARB_LEUMM  (Q03WW7    ), 
CARB_LISIN  (Q92AH3    ), CARB_LISMC  (C1KWD4    ), CARB_LISMF  (Q71YI1    ), 
CARB_LISMH  (B8DDR7    ), CARB_LISMO  (Q8Y665    ), CARB_LISW6  (A0AJU0    ), 
CARB_LYSSC  (B1HQC1    ), CARB_MACCJ  (B9EB69    ), CARB_METAC  (Q8TNY4    ), 
CARB_METB6  (A7I6J1    ), CARB_METBA  (P13258    ), CARB_METBF  (Q469Z7    ), 
CARB_METHJ  (Q2FLD9    ), CARB_METLZ  (A2SQ53    ), CARB_METMA  (P58944    ), 
CARB_METMJ  (A3CU73    ), CARB_METPE  (B8GEA3    ), CARB_METS3  (A5UKG5    ), 
CARB_METTH  (O27077    ), CARB_METTP  (A0B8K9    ), CARB_MICLC  (C5CCF1    ), 
CARB_MYCBO  (Q7U054    ), CARB_MYCGI  (A4TBY6    ), CARB_MYCLE  (Q9CCR2    ), 
CARB_MYCSJ  (A3PZ65    ), CARB_MYCSK  (A1UFK4    ), CARB_MYCSS  (Q1B9F9    ), 
CARB_MYCTO  (P9WPK2    ), CARB_MYCTU  (P9WPK3    ), CARB_MYCVP  (A1T8H1    ), 
CARB_MYXXD  (Q1D6Y8    ), CARB_NATTJ  (B2A170    ), CARB_NEIGO  (Q59599    ), 
CARB_NEIMA  (Q9JW02    ), CARB_NEIMB  (Q9JXW8    ), CARB_NOSS1  (Q8YQL2    ), 
CARB_OENOB  (Q04H29    ), CARB_ORYSJ  (B9EXM2    ), CARB_PASMU  (Q9CKV0    ), 
CARB_PEDPA  (Q03HB0    ), CARB_PELTS  (A5D508    ), CARB_PROAC  (Q6A914    ), 
CARB_PSEAE  (P38100    ), CARB_PSECP  (B8H8U5    ), CARB_PSELT  (A8F453    ), 
CARB_PSEPK  (Q88DU6    ), CARB_PSESM  (Q87WP4    ), CARB_PYRAE  (Q8ZY48    ), 
CARB_PYRFU  (Q8U085    ), CARB_RALSO  (Q8XZ83    ), CARB_RENSM  (A9WSA8    ), 
CARB_RHILO  (Q98I87    ), CARB_RHIME  (Q92PZ4    ), CARB_RHOBA  (Q7UJ58    ), 
CARB_RUBXD  (Q1AVY9    ), CARB_SALTI  (Q8Z9L7    ), CARB_SALTY  (P14846    ), 
CARB_SCHPO  (O94313    ), CARB_SHIFL  (P63738    ), CARB_STAA1  (A7X1F4    ), 
CARB_STAA2  (A6U122    ), CARB_STAA3  (Q2FHN5    ), CARB_STAA8  (Q2FZ72    ), 
CARB_STAA9  (A5IS88    ), CARB_STAAB  (Q2YXG5    ), CARB_STAAC  (Q5HGM9    ), 
CARB_STAAE  (A6QGA4    ), CARB_STAAM  (P63739    ), CARB_STAAN  (P63740    ), 
CARB_STAAR  (Q6GHN2    ), CARB_STAAS  (Q6GA10    ), CARB_STAAT  (A8Z3P0    ), 
CARB_STAAW  (P58940    ), CARB_STACT  (B9DPN2    ), CARB_STAEQ  (Q5HPY8    ), 
CARB_STAES  (Q8CPJ4    ), CARB_STAHJ  (Q4L5Q5    ), CARB_STAS1  (Q49WY4    ), 
CARB_STRA1  (Q3K150    ), CARB_STRA3  (Q8E5F5    ), CARB_STRA5  (Q8DZQ7    ), 
CARB_STRAW  (Q827Q7    ), CARB_STRCO  (Q9KXR6    ), CARB_STRE4  (C0M756    ), 
CARB_STRGC  (A8AX83    ), CARB_STRGG  (B1W463    ), CARB_STRMU  (Q8DUP3    ), 
CARB_STRP1  (Q9A0C6    ), CARB_STRP2  (Q04K48    ), CARB_STRP3  (P0DA14    ), 
CARB_STRP4  (B5E512    ), CARB_STRP6  (Q5XCR6    ), CARB_STRP7  (C1C7Q3    ), 
CARB_STRP8  (P58941    ), CARB_STRPG  (A2RF60    ), CARB_STRPI  (B1IC65    ), 
CARB_STRPJ  (B8ZJT9    ), CARB_STRPN  (Q97QE4    ), CARB_STRPQ  (P0DA15    ), 
CARB_STRPS  (B2IQ67    ), CARB_STRPZ  (B5XKW2    ), CARB_STRR6  (Q8CWR0    ), 
CARB_STRS7  (C0MEH1    ), CARB_STRSV  (A3CNI5    ), CARB_STRT1  (Q5M0W9    ), 
CARB_STRT2  (Q5M5F6    ), CARB_STRTD  (Q03LT8    ), CARB_STRU0  (B9DRV7    ), 
CARB_STRZJ  (C1CEM9    ), CARB_STRZP  (C1CL09    ), CARB_STRZT  (C1CR31    ), 
CARB_SULAC  (Q4J8E8    ), CARB_SULIA  (C3N664    ), CARB_SULIK  (C4KHM7    ), 
CARB_SULIL  (C3MQE3    ), CARB_SULIM  (C3MW21    ), CARB_SULIN  (C3NH23    ), 
CARB_SULIY  (C3NEM0    ), CARB_SULSO  (Q59969    ), CARB_SULTO  (Q970U7    ), 
CARB_SYMTH  (Q67Q54    ), CARB_SYNY3  (Q55756    ), CARB_THEAC  (Q9HK17    ), 
CARB_THEMA  (Q9WZ27    ), CARB_THENN  (B9KB91    ), CARB_THEP1  (A5IJL8    ), 
CARB_THEP3  (B0KBW4    ), CARB_THEPX  (B0K4D7    ), CARB_THERP  (B9KXM5    ), 
CARB_THESQ  (B1L8T8    ), CARB_THET2  (P96495    ), CARB_THET8  (Q5SKN1    ), 
CARB_THEVO  (Q97AJ3    ), CARB_TRICU  (P46056    ), CARB_VIBCH  (Q9KPH9    ), 
CARB_VIBPA  (Q87SF3    ), CARB_VIBVU  (Q8DEM2    ), CARB_VIBVY  (Q7MNU0    ), 
CARB_XANAC  (P58942    ), CARB_XANCP  (P58943    ), CARB_XYLFA  (Q9PEC1    ), 
CARB_XYLFT  (Q87EB8    ), CARB_YEAST  (P03965    ), CARB_YERPE  (Q8ZIL4    ), 
CARB_ZYMMO  (O50236    ), CARY_BACHD  (Q9K8V7    ), CARY_BACSU  (P18185    ), 
CARY_GEOSE  (Q9ZB63    ), CARY_LACPL  (Q9RLS9    ), CPSM_HUMAN  (P31327    ), 
CPSM_LITCT  (Q91293    ), CPSM_MOUSE  (Q8C196    ), CPSM_RAT    (P07756    ), 
DUR1_LACKL  (A5H0J2    ), DUR1_YEAST  (P32528    ), HFA1_YEAS1  (B3LM95    ), 
HFA1_YEAS2  (C7GRE4    ), HFA1_YEAS7  (A6ZMR9    ), HFA1_YEAS8  (C8ZF72    ), 
HFA1_YEAST  (P32874    ), LAMA_EMENI  (P38095    ), MCCA_ARATH  (Q42523    ), 
MCCA_DICDI  (Q54KE6    ), MCCA_HUMAN  (Q96RQ3    ), MCCA_MOUSE  (Q99MR8    ), 
MCCA_ORYSJ  (Q2QMG2    ), MCCA_RAT    (Q5I0C3    ), MCCA_SOYBN  (Q42777    ), 
MET13_DROME (Q9VIK9    ), MFND_METFA  (C7P8V7    ), PCCA_CAEBR  (Q612F5    ), 
PCCA_CAEEL  (Q19842    ), PCCA_HUMAN  (P05165    ), PCCA_MOUSE  (Q91ZA3    ), 
PCCA_RAT    (P14882    ), PYC1_CAEEL  (O17732    ), PYC1_YEAST  (P11154    ), 
PYC2_YEAST  (P32327    ), PYCA_METJA  (Q58626    ), PYCA_METTH  (O27939    ), 
PYC_ASPNG   (Q9HES8    ), PYC_ASPTE   (O93918    ), PYC_ASPTN   (Q0CLK1    ), 
PYC_BACSU   (Q9KWU4    ), PYC_PICAN   (Q8X1T3    ), PYC_PICPA   (P78992    ), 
PYC_SCHPO   (Q9UUE1    ), PYR1_DICDI  (P20054    ), PYR1_DROME  (P05990    ), 
PYR1_EMENI  (O93937    ), PYR1_HUMAN  (P27708    ), PYR1_MESAU  (P08955    ), 
PYR1_MOUSE  (B2RQC6    ), PYR1_SCHPO  (Q09794    ), PYR1_SQUAC  (Q91437    ), 
PYR1_YEAST  (P07259    ), XRCC4_ARATH (Q682V0    ), Y4RH_SINFN  (P55641    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

CARB_HYPBU  (A2BJL3    ), PYCA_ARCFU  (O30019    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

ACCC_POPEU  (P84546    )

		
UniProtKB/Swiss-Prot
'Unknown' sequences
1 sequence

ARLY2_RHILO (Q981V0    )

		
UniProtKB/Swiss-Prot
False positive sequences
127 sequences

ACH1_CANAL  (P83773    ), ACH1_YARLI  (Q6C3Z9    ), AKAP9_HUMAN (Q99996    ), 
AKAP9_MOUSE (Q70FJ1    ), AL121_ARATH (Q8VZC3    ), ALDH_LINUS  (Q40255    ), 
AP2B_YEAST  (P27351    ), ARGB_PELUB  (Q4FNF2    ), ARMX5_HUMAN (Q6P1M9    ), 
ARMX5_PONAB (Q5RDG2    ), ATC1_DICDI  (P54678    ), ATG12_PICAN (A7KAJ7    ), 
BTRJ_BACCI  (Q4H4E7    ), CAP6_ARATH  (Q8VYT2    ), CH60_PHATC  (A0T0H6    ), 
CMOB_NAUPA  (B9L8G5    ), COBT_METC4  (Q9X7F4    ), CRNS1_CHICK (D3KCC4    ), 
CRNS1_HUMAN (A5YM72    ), CRNS1_MOUSE (Q6ZPS2    ), CTRO_HUMAN  (O14578    ), 
CTRO_MOUSE  (P49025    ), CUTI_DIDRA  (P29292    ), CYSH_VIBVU  (Q8CWK6    ), 
CYSH_VIBVY  (Q7MHA7    ), DAPB_BDEBA  (Q6MRM8    ), DPO3_STRA3  (P63983    ), 
DPO3_STRA5  (P63984    ), DYH9_HUMAN  (Q9NYC9    ), EABN2_BACSU (P42293    ), 
F16PC_LACC3 (Q036S2    ), F16PC_LACCB (B3W9A8    ), F200A_MACFA (Q4R6P1    ), 
GCSH3_ARATH (Q9LQL0    ), GGLO_BOVIN  (Q3ZC33    ), GLB1_MAIZE  (P15590    ), 
GLS24_STRP1 (Q99ZE5    ), GLS24_STRP3 (P0CZ86    ), GLS24_STRP6 (Q5XBW6    ), 
GLS24_STRP8 (Q7CN70    ), GLS24_STRPM (Q48TA2    ), GLS24_STRPQ (P0CZ87    ), 
GLYA_PICTO  (Q6L1F6    ), GPI7_YARLI  (Q6C7Q6    ), GUAD_DICDI  (Q86AW9    ), 
GUNG_CLOTH  (Q05332    ), HLDE_SERP5  (A8GJU3    ), HMW2_MYCGA  (Q7NBF8    ), 
HRDA_STRCO  (P18182    ), INVSB_XENLA (Q71S21    ), IORB_METTM  (P80911    ), 
KAD_MESFL   (Q6F1X3    ), KIN17_DICDI (Q55D16    ), LAA1_YEAST  (P39526    ), 
MDH1_AQUAE  (O67655    ), MDH_MYXXA   (Q6ZZC6    ), MDH_PELCD   (Q3A5S0    ), 
MDH_PYRAE   (Q8ZVB2    ), MED10_CANAL (Q5A3K2    ), MFND_METJA  (Q58225    ), 
MIF2_YEAST  (P35201    ), MINE_VIBCH  (Q9KQN7    ), MINE_VIBPA  (Q87RC5    ), 
MINE_VIBVU  (Q8DFS2    ), MINE_VIBVY  (Q7MML2    ), MSMJL_METJA (Q58543    ), 
MTAD_HALWD  (Q18EV7    ), NU3M_WICCA  (P48913    ), OBG_HAEPS   (B8F871    ), 
PARP2_HUMAN (Q9UGN5    ), PARP2_MOUSE (O88554    ), PEPT_VIBF1  (Q5E0X3    ), 
PRP5_MAGO7  (A4RN46    ), PSTB_BORAP  (Q0SNU4    ), PSTB_BORBP  (Q662E6    ), 
PSUG_GEMAT  (C1AA54    ), PURCE_DICDI (Q54QE4    ), RECR_RHOP5  (Q07H54    ), 
RLMF_FLAJ1  (A5FHX5    ), RPOC_NITMU  (Q2YB04    ), RPOD_COXBU  (Q83BB6    ), 
RPOD_RICBR  (Q1RKH7    ), RPOD_RICCN  (Q92FZ8    ), RPOD_RICFE  (Q4UJT1    ), 
RPOD_RICPR  (P33451    ), RPOD_RICTY  (Q68VQ5    ), RPOS_COXBU  (Q9KI19    ), 
RPSB_CORDI  (P33118    ), SEC39_YEAST (Q12745    ), SGO1_SCHPO  (Q9P7A0    ), 
SIGA2_SYNE7 (Q31ME3    ), SIGA3_SYNE7 (Q31QG5    ), SIGA_MYCBO  (P0A603    ), 
SIGA_MYCTO  (P9WGI0    ), SIGA_MYCTU  (P9WGI1    ), SIGA_STRCO  (P18183    ), 
SIGA_STRGR  (P77951    ), SIGA_THEAQ  (Q9EZJ8    ), SIGA_THET2  (Q72L95    ), 
SIGB_MYCTO  (P9WGI4    ), SIGB_MYCTU  (P9WGI5    ), SUZ2_DROME  (P25172    ), 
SYI_ANAMM   (Q5PAL9    ), SYV_BUCAI   (P57447    ), TMN3_ARATH  (Q9ZPS7    ), 
TORD_COLP3  (Q484F1    ), TSAE_RICBR  (Q1RGZ7    ), TSAE_RICPR  (Q9ZED0    ), 
TSAE_RICTY  (Q68XZ1    ), TTC12_HUMAN (Q9H892    ), TTC12_MACFA (Q95LY5    ), 
UBP28_HUMAN (Q96RU2    ), UBP28_MOUSE (Q5I043    ), UBP28_RAT   (D3ZJ96    ), 
VATE_METLZ  (A2SST2    ), VIT3_DROME  (P06607    ), XB35_ORYSJ  (Q7EZ44    ), 
Y2393_NOSS1 (P46079    ), Y449_MYCGE  (P47687    ), Y874_METJA  (Q58284    ), 
Y952_ARCFU  (O29310    ), YECD_ECO57  (P0ADI8    ), YECD_ECOLI  (P0ADI7    ), 
YGIN_ECO57  (P0ADU3    ), YGIN_ECOLI  (P0ADU2    ), YGIN_SHIFL  (P0ADU4    ), 
YPF15_PLAF7 (Q8IBB8    )
» more

PDB
[Detailed view]
59 PDB

1A9X; 1BNC; 1BXR; 1C30; 1C3O; 1CE8; 1CS0; 1DV1; 1JDB; 1KEE; 1M6V; 1T36; 1W93; 1W96; 2C00; 2GPS; 2GPW; 2HJW; 2J9G; 2V58; 2V59; 2V5A; 2VQD; 2VR1; 2W6M; 2W6N; 2W6O; 2W6P; 2W6Q; 2W6Z; 2W70; 2W71; 2YL2; 3G8C; 3G8D; 3GID; 3GLK; 3JRW; 3JRX; 3JZF; 3JZI; 3RUP; 3RV3; 3RV4; 4HQ6; 4HR7; 4MV1; 4MV3; 4MV4; 4MV6; 4MV7; 4MV8; 4MV9; 4RZQ; 5CSK; 5CSL; 5DOT; 5DOU; 5KKN
» more

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