PROSITE logo

PROSITE entry PS00870


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] CLPAB_1
Accession [info] PS00870
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00679

Name and characterization of the entry

Description [info] Chaperonins clpA/B signature 1.
Pattern [info]
[DA]-[AI]-[SGA]-[NQS]-[LIVMF](2)-K-[PT]-x-[LM]-x(2)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 197 in 197 different sequences
Number of true positive hits 197 in 197 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 14
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.36 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
197 sequences

CLPAA_SOLLC (P31541), CLPAB_SOLLC (P31542), CLPA_BRANA  (P46523), 
CLPA_ECO57  (P0ABI1), CLPA_ECOL6  (P0ABI0), CLPA_ECOLI  (P0ABH9), 
CLPA_FUSBL  (P05444), CLPB1_ARATH (P42730), CLPB1_NOSS1 (Q8YUL9), 
CLPB1_ORYSJ (Q6F2Y7), CLPB1_PARMW (Q7U637), CLPB1_STRAW (Q82EU9), 
CLPB1_SYNE7 (P53533), CLPB1_SYNY3 (P74459), CLPB1_THEVB (Q8DJ40), 
CLPB2_CHLTE (Q8KA87), CLPB2_NOSS1 (Q8YM56), CLPB2_ORYSJ (Q75GT3), 
CLPB2_PARMW (Q7U3T3), CLPB2_STRAW (Q826F2), CLPB2_SYNE7 (O34209), 
CLPB2_SYNY3 (P74361), CLPB2_THEVB (Q8DG71), CLPB3_ARATH (Q9LF37), 
CLPB3_ORYSJ (Q0E3C8), CLPB4_ARATH (Q8VYJ7), CLPB_AGRFC  (Q7CU92), 
CLPB_AQUAE  (O67588), CLPB_BACAN  (Q81TT4), CLPB_BACC1  (Q73BY1), 
CLPB_BACCR  (Q81GM5), CLPB_BACTN  (Q89YY3), CLPB_BDEBA  (Q6MIV0), 
CLPB_BIFLO  (Q8G4X4), CLPB_BLOFL  (Q7VQF3), CLPB_BORBR  (Q7WHB6), 
CLPB_BORPA  (Q7W9E6), CLPB_BORPE  (Q7VYV6), CLPB_BRADU  (Q89UL2), 
CLPB_BRUME  (Q8YJ91), CLPB_BRUSU  (Q7CEG6), CLPB_CAMJE  (Q9PI02), 
CLPB_CAUVC  (Q9A9T4), CLPB_CHLCV  (Q822Q4), CLPB_CHLMU  (Q9PKS5), 
CLPB_CHLPN  (Q7AJA9), CLPB_CHLTR  (O84115), CLPB_CHRVO  (Q7NWN7), 
CLPB_CLOAB  (Q97KG0), CLPB_CLOPE  (Q8XKG8), CLPB_CLOTE  (Q898C7), 
CLPB_CORDI  (Q6NF05), CLPB_COREF  (Q8FM94), CLPB_CORGL  (P53532), 
CLPB_COXBU  (Q83F55), CLPB_DEIRA  (Q9RVI3), CLPB_DICNO  (P17422), 
CLPB_ECO57  (P63285), CLPB_ECOL6  (P63286), CLPB_ECOLI  (P63284), 
CLPB_ENTFA  (Q831Y7), CLPB_FUSNN  (Q8RHQ8), CLPB_GEOSL  (Q74FF1), 
CLPB_GLOVI  (Q7NFE9), CLPB_HAEDU  (Q7VNH1), CLPB_HAEIN  (P44403), 
CLPB_HELHP  (Q7VJY3), CLPB_HELPJ  (Q9ZMH1), CLPB_HELPY  (P71404), 
CLPB_LACLA  (Q9CFF3), CLPB_LACLM  (O68185), CLPB_LACPL  (Q88VX7), 
CLPB_LEPBY  (O87444), CLPB_LEPIC  (Q72QU2), CLPB_LEPIN  (Q8F509), 
CLPB_LISIN  (Q929G7), CLPB_LISM4  (G2K265), CLPB_LISMF  (Q71XF9), 
CLPB_LISMO  (Q8Y570), CLPB_MALP2  (Q8EW28), CLPB_MEIRU  (Q7X2S8), 
CLPB_MYCBO  (P63287), CLPB_MYCGA  (Q7NAZ3), CLPB_MYCGE  (P47597), 
CLPB_MYCLE  (Q9CB26), CLPB_MYCPA  (Q73T66), CLPB_MYCPN  (P75247), 
CLPB_MYCTO  (P9WPD0), CLPB_MYCTU  (P9WPD1), CLPB_NEIMA  (Q9JTP9), 
CLPB_NEIMB  (Q9JYQ8), CLPB_NITEU  (Q82SD8), CLPB_NITV2  (Q72AW6), 
CLPB_OCEIH  (Q8EU05), CLPB_PARUW  (Q6MD97), CLPB_PASMU  (Q9CKC0), 
CLPB_PHOLL  (Q7N788), CLPB_PHOPR  (Q6LMY0), CLPB_PORGI  (Q7MVE7), 
CLPB_PROFC  (Q7WSY8), CLPB_PROMA  (Q7VBL0), CLPB_PROMM  (Q7V8B1), 
CLPB_PROMP  (Q7V2A3), CLPB_PSEAE  (Q9HVN5), CLPB_PSEPK  (Q88Q71), 
CLPB_PSESM  (Q889C2), CLPB_RALN1  (Q8XZR0), CLPB_RHILO  (Q98G96), 
CLPB_RHIME  (Q92MK7), CLPB_RHOBA  (Q7UM33), CLPB_RHOPA  (Q6N1H2), 
CLPB_RICBR  (Q1RGR1), CLPB_RICCN  (Q92JK8), CLPB_RICFE  (Q4UN57), 
CLPB_RICPR  (Q9ZEA9), CLPB_RICTY  (Q68XR2), CLPB_SALTI  (Q7AMH5), 
CLPB_SALTY  (Q7CQ01), CLPB_SHEON  (Q8EBE6), CLPB_SHIFL  (Q7UBW5), 
CLPB_STAAC  (Q5HHB0), CLPB_STAAM  (Q99VB5), CLPB_STAAN  (Q7A6G6), 
CLPB_STAAR  (Q6GIB2), CLPB_STAAS  (Q6GAV1), CLPB_STAAW  (Q8NXE7), 
CLPB_STAEQ  (Q5HQI5), CLPB_STAES  (Q8CPT5), CLPB_STRAL  (Q9Z6E4), 
CLPB_STRCO  (Q8CJV9), CLPB_STRMU  (Q8DTC7), CLPB_THET2  (Q72IK9), 
CLPB_THET8  (Q9RA63), CLPB_TREDE  (Q73K92), CLPB_TREPA  (O83110), 
CLPB_TROW8  (Q83N78), CLPB_TROWT  (Q83FI1), CLPB_VIBCH  (Q9KU18), 
CLPB_VIBPA  (Q87S63), CLPB_VIBVU  (Q8DEV2), CLPB_VIBVY  (Q7MNK1), 
CLPB_WOLPM  (Q73IE4), CLPB_WOLSU  (Q7M9X4), CLPB_XANAC  (Q8PHQ4), 
CLPB_XANCP  (Q8P6A0), CLPB_XYLFA  (Q9PGC1), CLPB_XYLFT  (Q87AX8), 
CLPB_YEREN  (Q9F746), CLPB_YERPE  (Q74X11), CLPC1_ARATH (Q9FI56), 
CLPC1_MYCS2 (A0R574), CLPC1_MYCTO (P9WPC8), CLPC1_MYCTU (P9WPC9), 
CLPC1_ORYSJ (Q7F9I1), CLPC2_ARATH (Q9SXJ7), CLPC2_ORYSJ (Q2QVG9), 
CLPC3_ORYSJ (Q53LY0), CLPC4_ORYSJ (Q53N47), CLPC_BACSU  (P37571), 
CLPC_CHLPN  (Q9Z8A6), CLPC_CYACA  (Q9TM05), CLPC_GUITH  (O78410), 
CLPC_MYCBO  (P0A523), CLPC_MYCLE  (P24428), CLPC_NEOYE  (Q1XDF4), 
CLPC_PEA(P35100), CLPC_PORPU  (P51332), CLPC_STAA3  (Q2FJB5), 
CLPC_STAA8  (Q2G0P5), CLPC_STAAB  (Q2YSD6), CLPC_STAAC  (P0C281), 
CLPC_STAAM  (Q99W78), CLPC_STAAN  (Q7A797), CLPC_STAAR  (Q6GJE4), 
CLPC_STAAS  (Q6GBW3), CLPC_STAAW  (Q8NXY8), CLPC_STAEQ  (Q5HRM8), 
CLPC_STAES  (Q8CQ88), CLPC_STAHJ  (Q4L3I4), CLPC_STAS1  (Q49V34), 
CLPC_TRICV  (P49574), CLPD1_ORYSJ (Q6H795), CLPD2_ORYSJ (Q7XL03), 
CLPD_ARATH  (P42762), CLPE_BACSU  (O31673), CLPE_LACLA  (Q9CI09), 
CLPE_LACLM  (Q9S5Z2), CLPE_STRPN  (P35594), CLPV1_PSEAE (Q9I742), 
CLP_TRYBB   (P31543), HLYB_BRAHO  (Q54316), HS104_SCHPO (O94641), 
HS104_YEAST (P31539), HSP78_CANAL (Q96UX5), HSP78_SCHPO (O74402), 
HSP78_YEAST (P33416), HSP98_NEUCR (P31540)
» more

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

ADPR_RHOER  (Q01357), CLPB1_CHLTE (Q8KG79), CLPB2_ARATH (F4JVJ1), 
CLPC_STRP6  (Q5XCL7), CLPL_LACLL  (Q06716), CLPL_STAA3  (Q2FDV8), 
CLPL_STAA8  (Q2FV74), CLPL_STAAB  (Q2YWB1), CLPL_STAAC  (Q5HD02), 
CLPL_STAAM  (Q99R88), CLPL_STAAN  (Q7A3F4), CLPL_STAAR  (Q6GDQ0), 
CLPL_STAAS  (Q6G6C6), CLPL_STAAW  (Q8NUR7)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CLPA_PINPS  (P81671), CLPA_POPEU  (P84565), CLPB_ACICA  (P82956), 
CLP_TRYCR   (O15885)
» more

PDB
[Detailed view]
66 PDB

1JBK; 1KSF; 1QVR; 1R6B; 3J3R; 3J3S; 3J3T; 3J3U; 3PXG; 3PXI; 4CIU; 4D2Q; 4D2U; 4D2X; 4HSE; 5KNE; 5OFO; 5OG1; 5VJH; 5VY8; 5VY9; 5VYA; 5WBW; 6AHF; 6AMN; 6DJU; 6DJV; 6ED3; 6EM8; 6EM9; 6EMW; 6N8T; 6N8V; 6N8Z; 6OAX; 6OAY; 6OG1; 6OG2; 6OG3; 6QS6; 6QS7; 6QS8; 6UQE; 6UQO; 6W1Z; 6W20; 6W21; 6W22; 6W23; 6W24; 6W6E; 6W6G; 6W6H; 6W6I; 6W6J; 7ABR; 7L6N; 7UIV; 7UIW; 7UIX; 7UIY; 7UIZ; 7UJ0; 8A8U; 8A8V; 8A8W
» more