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Entry: PS00872

General information about the entry

Entry name [info] NA_GALACTOSIDE_SYMP
Accession [info] PS00872
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00680

Name and characterization of the entry

Description [info] Sodium:galactoside symporter family signature.
Pattern [info]
[DG]-x(3)-G-x(3)-[DN]-x(6,8)-[GA]-[KRHQ]-[FSAR]-[KRL]-[PT]-[FYW]-
[LIVMWQ]-[LIV]-x(0,1)-[GAFV]-[GSTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
23 sequences

GUTA_BACSU  (O34368    ), LACP_STAXY  (O33814    ), LACY_LACDA  (P22733    ), 
LACY_LACHE  (Q7WTB2    ), LACY_LEULA  (Q48624    ), LACY_STRTR  (P23936    ), 
MELB_ECOLI  (P02921    ), MELB_ENTAE  (O07366    ), MELB_KLEPN  (Q02581    ), 
MELB_SALTY  (P30878    ), RAFP_PEDPE  (P43466    ), UIDB2_ECOLI (P0CE45    ), 
UIDB_ECOLI  (P0CE44    ), XYLP_LACPE  (P96792    ), Y1374_SYNY3 (P74168    ), 
YAGG_ECOLI  (P75683    ), YICJ_ECOLI  (P31435    ), YIHO_ECOLI  (P32136    ), 
YIHO_SALTY  (Q9L7R4    ), YIHP_ECOLI  (P32137    ), YIHP_SALTY  (Q9L7R5    ), 
YJMB_BACSU  (O34961    ), YNAJ_BACSU  (P94488    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

YCR3_ESCVU  (Q01334    )

		
PDB
[Detailed view]
1 PDB

4M64

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