PROSITE entry PS00872
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General information about the entry
| Entry name [info] | NA_GALACTOSIDE_SYMP |
| Accession [info] | PS00872 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00680 |
Name and characterization of the entry
| Description [info] | Sodium:galactoside symporter family signature. |
| Pattern [info] |
[DG]-x(3)-G-x(3)-[DN]-x(6,8)-[GA]-[KRHQ]-[FSAR]-[KRL]-[PT]-[FYW]- [LIVMWQ]-[LIV]-x(0,1)-[GAFV]-[GSTA]. |
Numerical results [info]
| Total number of hits | 23 in 23 different sequences |
| Number of true positive hits | 23 in 23 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.83 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
23 sequences
GUTA_BACSU (O34368), LACP_STAXY (O33814), LACY_LACDA (P22733), LACY_LACHE (Q7WTB2), LACY_LEULA (Q48624), LACY_STRTR (P23936), MELB_ECOLI (P02921), MELB_KLEAE (O07366), MELB_KLEPN (Q02581), MELB_SALTY (P30878), RAFP_PEDPE (P43466), UIDB2_ECOLI (P0CE45), UIDB_ECOLI (P0CE44), XYLP_LACPE (P96792), Y1374_SYNY3 (P74168), YAGG_ECOLI (P75683), YICJ_ECOLI (P31435), YIHO_ECOLI (P32136), YIHO_SALTY (Q9L7R4), YIHP_ECOLI (P32137), YIHP_SALTY (Q9L7R5), YJMB_BACSU (O34961), YNAJ_BACSU (P94488)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
YCR3_PSEVU (Q01334) |
| PDB [Detailed view] |
3 PDB
4M64; 8FQ9; 8T60 |