To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS00875

General information about the entry

Entry name [info] T2SP_D
Accession [info] PS00875
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-DEC-2004 DATA UPDATE; 20-DEC-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00683

Name and characterization of the entry

Description [info] Bacterial type II secretion system protein D signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_12 which contains 556'388 sequence entries.

Total number of hits 32 in 32 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.97 %

Comments [info]

Taxonomic range [info] Bacteriophages, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
32 sequences

COME_HAEIN  (P31772    ), G4P_BPF1    (P03666    ), G4P_BPFD    (P03664    ), 
G4P_BPI22   (P15420    ), G4P_BPIF1   (O80300    ), G4P_BPIKE   (P03667    ), 
G4P_BPM13   (P03665    ), GSPD1_DICCH (P31700    ), GSPD2_DICD3 (Q01565    ), 
GSPD_AERHY  (P31780    ), GSPD_AERSA  (P45778    ), GSPD_ECOLI  (P45758    ), 
GSPD_KLEPN  (P15644    ), GSPD_PECCC  (P31701    ), GSPD_PSEAE  (P35818    ), 
GSPD_VIBCH  (P45779    ), GSPD_XANCP  (P29041    ), HOFQ_ECOLI  (P34749    ), 
HRPA1_XANEU (P80151    ), HRPA_RALSO  (Q52498    ), HRPH_PSESY  (Q01723    ), 
INVG_SALTY  (P35672    ), MXID_SHIFL  (Q04641    ), MXID_SHISO  (Q55293    ), 
PILQ_NEIG1  (Q5FAD2    ), PILQ_NEIGO  (P35819    ), PILQ_NEIMA  (Q9JVW4    ), 
PILQ_NEIMB  (Q70M91    ), PILQ_NEIMH  (Q9ZHF3    ), PILQ_PSEAE  (P34750    ), 
SPIA_SALT1  (D0ZWR9    ), YSCC_YEREN  (Q01244    )
» more

False negative sequences
1 sequence

DR774_DEIRA (Q9RW95    )

[Detailed view]

5TCQ; 5WLN; 5WQ7; 5WQ8; 5WQ9

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission