Entry: PS00879

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General information about the entry

Entry name [info] ODR_DC_2_2
Accession [info] PS00879
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00685

Name and characterization of the entry

Description [info] Orn/DAP/Arg decarboxylases family 2 signature 2.
Pattern [info]
[GSA]-x(2,6)-[LIVMSCP]-x-{N}-[LIVMF]-[DNS]-[LIVMCA]-G-G-G-[LIVMFY]-
[GSTPCEQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 170 in 170 different sequences
Number of true positive hits 144 in 144 different sequences
Number of 'unknown' hits
Number of false positive hits 26 in 26 different sequences
Number of false negative sequences 40
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 84.71 %
Recall (true positives / (true positives + false negatives)) 78.26 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
144 sequences

ADC2_ORYSJ  (Q7XRA1), AZIN1_HUMAN (O14977), AZIN1_MOUSE (O35484), 
AZIN1_PONAB (Q5R7K3), AZIN1_RAT   (Q63764), AZIN2_HUMAN (Q96A70), 
AZIN2_MOUSE (Q8BVM4), AZIN2_RAT   (D4A693), AZIN2_XENLA (Q9I8S4), 
BTRK_BACCI  (Q2L4H3), COMT1_SACOF (O82054), DCDA1_ARATH (Q949X7), 
DCDA2_ARATH (Q94A94), DCDA_AQUAE  (O67262), DCDA_ARCFU  (O29458), 
DCDA_BACHD  (Q9KCM5), DCDA_BACMT  (P41023), DCDA_BACSU  (P23630), 
DCDA_BACTN  (Q8A800), DCDA_BUCAI  (P57513), DCDA_BUCAP  (Q8K9C4), 
DCDA_CAMJE  (Q9PII5), DCDA_COREF  (Q8RQM6), DCDA_CORGL  (P09890), 
DCDA_ECOLI  (P00861), DCDA_ECOLW  (E0IWI3), DCDA_HAEIN  (P44316), 
DCDA_HELPJ  (Q9ZME5), DCDA_HELPY  (P56129), DCDA_METJA  (Q58497), 
DCDA_MYCBO  (P0A5M5), DCDA_MYCS2  (Q9X5M1), DCDA_MYCTO  (P9WIU6), 
DCDA_MYCTU  (P9WIU7), DCDA_NEIMA  (Q9JWA6), DCDA_NEIMB  (Q9JXM2), 
DCDA_ORYSJ  (Q6ZG77), DCDA_PSEAE  (P19572), DCDA_PSEFL  (O05321), 
DCDA_STAAC  (Q5HG20), DCDA_STRCO  (Q9ZBH5), DCDA_SYNY3  (Q55484), 
DCDA_VIBCH  (Q9KVL7), DCLO_SELRU  (O50657), DCOR1_DROME (P40807), 
DCOR1_XENLA (P27120), DCOR2_DROME (P40808), DCOR_BOVIN  (P27117), 
DCOR_CAEEL  (P41931), DCOR_CANAL  (P78599), DCOR_CAPAN  (Q8S3N2), 
DCOR_CHICK  (P27118), DCOR_CRIGR  (P14019), DCOR_DATST  (P50134), 
DCOR_DICDI  (Q54UF3), DCOR_HUMAN  (P11926), DCOR_LEIDO  (P27116), 
DCOR_MOUSE  (P00860), DCOR_MUSPA  (P27119), DCOR_NEUCR  (P27121), 
DCOR_PANRE  (P49725), DCOR_PARBR  (Q92445), DCOR_RAT    (P09057), 
DCOR_SOLLC  (O22616), DCOR_TRYBB  (P07805), DCOR_YEAST  (P08432), 
NSPC_HERAR  (Q5QCP2), SPE1_ARATH  (Q9SI64), SPE1_AVESA  (P22220), 
SPE1_BRAJU  (O82475), SPE1_DIACA  (Q96412), SPE1_ORYSJ  (Q9SNN0), 
SPE1_PEA    (Q43075), SPE1_SOLLC  (P49726), SPE1_SOYBN  (Q39827), 
SPE2_ARATH  (O23141), SPEA1_SYNY3 (P74576), SPEA_AERHH  (A0KIP8), 
SPEA_AERS4  (A4SPD6), SPEA_ALKEH  (Q0ACK8), SPEA_BACFN  (Q5LIQ3), 
SPEA_BACFR  (Q64ZT8), SPEA_BACTN  (Q8A2B1), SPEA_BACV8  (A6L012), 
SPEA_CHRVO  (Q7NU27), SPEA_DEIRA  (Q9RXR4), SPEA_ECO57  (Q8XCX9), 
SPEA_ECO5E  (B5YQD6), SPEA_ECOL6  (Q8FE34), SPEA_ECOLI  (P21170), 
SPEA_ECOSM  (B1LDE8), SPEA_GEOBB  (B5EIW4), SPEA_GEODF  (B9M6H6), 
SPEA_GEOLS  (B3EAF3), SPEA_GEOMG  (Q39X78), SPEA_GEOSL  (A0A4W3), 
SPEA_GEOSM  (C6E3V4), SPEA_GEOUR  (A5GB52), SPEA_HAMD5  (C4K6F4), 
SPEA_KLEP3  (B5XUB1), SPEA_MARHV  (A1TY02), SPEA_NEIMA  (Q9JT25), 
SPEA_NEIMB  (Q9K0U3), SPEA_NOSS1  (Q8YRP3), SPEA_PASMU  (Q9CL60), 
SPEA_PELPD  (A1AS90), SPEA_PHOLL  (Q7N121), SPEA_PROM0  (A3PA96), 
SPEA_PROM2  (A8G243), SPEA_PROM3  (A2CDK1), SPEA_PROM5  (A2BU00), 
SPEA_PROM9  (Q31DD8), SPEA_PROMA  (Q7VEG4), SPEA_PROMH  (B4F1A4), 
SPEA_PROMM  (Q7TUJ9), SPEA_PROMP  (Q7V3M9), SPEA_PROMS  (A2BNH3), 
SPEA_PSEAE  (Q9HUX1), SPEA_PSEPK  (Q88QC7), SPEA_PSESM  (Q87VU3), 
SPEA_RHOBA  (Q7UTS2), SPEA_SALA4  (B5F5L1), SPEA_SALCH  (Q57K30), 
SPEA_SALDC  (B5FUJ7), SPEA_SALHS  (B4THH1), SPEA_SALNS  (B4T5J3), 
SPEA_SALPB  (A9N4N1), SPEA_SALSV  (B4TV55), SPEA_SALTI  (P60658), 
SPEA_SALTY  (P60659), SPEA_SHIF8  (Q0T0V3), SPEA_SHIFL  (Q83Q93), 
SPEA_SYNPX  (Q7U3S0), SPEA_SYNR3  (A5GWM2), SPEA_THEEB  (Q8DHY6), 
SPEA_TOLAT  (C4L9A9), SPEA_XANAC  (Q8PFQ5), SPEA_XANCP  (Q8P448), 
SPEA_XYLF2  (B2I6M1), SPEA_XYLFA  (Q9PH02), SPEA_XYLFM  (B0U1H6), 
SPEA_XYLFT  (Q87F25), SPEA_YERPE  (Q8ZHG8), TABA_PSESZ  (P31851)
» More

UniProtKB/Swiss-Prot
False negative sequences
40 sequences

DCDA_ACTPA  (O69203), DCDA_BUCBP  (Q89AC6), DCDA_DEIRA  (Q9RTK2), 
DCDA_FRATH  (Q2A5D5), DCDA_METTH  (O27390), DCDA_MYCLE  (Q50140), 
DCDA_THEAC  (Q9HK20), DCDA_THEMA  (Q9X1K5), DCDA_ZYMMO  (Q9Z661), 
DCOR_SCHPO  (Q9UQW9), NSPC_CAMJ8  (A8FNH9), NSPC_VIBAL  (Q56575), 
NSPC_VIBCH  (Q9KRL4), NSPC_VIBCL  (C6YCI2), NSPC_VIBVU  (Q8D8D2), 
SPEA2_SYNY3 (P72587), SPEA_GLOVI  (Q7NE10), SPEA_SHEAM  (A1S712), 
SPEA_SHEB2  (B8EAI2), SPEA_SHEB5  (A3D3G2), SPEA_SHEB8  (A6WM65), 
SPEA_SHEB9  (A9KY70), SPEA_SHEDO  (Q12LW6), SPEA_SHEFN  (Q083L6), 
SPEA_SHEHH  (B0TQX3), SPEA_SHELP  (A3QDD8), SPEA_SHEON  (Q8EFU5), 
SPEA_SHEPA  (A8H5G3), SPEA_SHEPC  (A4Y5Y9), SPEA_SHEPW  (B8CR70), 
SPEA_SHESA  (A0KVN8), SPEA_SHESH  (A8FWJ3), SPEA_SHESM  (Q0HJY2), 
SPEA_SHESR  (Q0HW78), SPEA_SHESW  (A1RKK8), SPEA_SHEWM  (B1KRD4), 
SPEA_VIBCH  (Q9KLD1), SPEA_VIBPA  (Q87JS8), SPEA_VIBVU  (Q8DA54), 
SPEA_VIBVY  (Q7MK24)
» More

UniProtKB/Swiss-Prot
False positive sequences
26 sequences

AATR2_DICDI (Q54K00), AB15B_ARATH (Q9LHD1), CG043_HUMAN (Q8WVR3), 
COMT1_MAIZE (Q06509), CUDP_METAN  (P29138), DCDA_HELPX  (B4XMC6), 
EF114_ARATH (Q9FH54), HMDH_CYBJA  (O74164), MCRC_METVA  (P07960), 
MRAY_GEOMG  (Q39YM2), MRAY_GEOSL  (Q748D3), NBN_DANRE   (Q5I2W8), 
OMT1_ORYSJ  (Q6ZD89), PFDA_METLZ  (A2STI6), PPN_MOUSE   (Q9EPX2), 
PYRH_VESOH  (A5CXD7), RABE2_HUMAN (Q9H5N1), RABE2_PONAB (Q5RCR6), 
RU1C_USTMA  (Q4P2Q5), SEPF_PROM3  (A2CBM2), SEPF_PROMM  (Q7V8W6), 
SUBL_ARATH  (O65351), TM86B_PIG   (F1RMN2), Y4YA_RHISN  (P55709), 
YP251_YEAST (Q12058), ZRP4_MAIZE  (P47917)
» More


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