Entry: PS00880

General information about the entry

Entry name [info] ACB_1
Accession [info] PS00880
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00686

Name and characterization of the entry

Description [info] Acyl-CoA-binding (ACB) domain signature.
Pattern [info]
[PTLV]-[GSTA]-x-[DENQA]-x-[LMFK]-x(2)-[LIVMFY]-[YV]-[GSA]-x-[FYH]-K-Q-
[GSAV]-[STL]-x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 72.31 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
47 sequences

ACB5A_DANRE (Q502L1    ), ACB5B_DANRE (A5WV69    ), ACBD4_BOVIN (Q2KHT9    ), 
ACBD4_HUMAN (Q8NC06    ), ACBD4_PONAB (Q5R7P6    ), ACBD4_RAT   (Q6DGF9    ), 
ACBD5_BOVIN (P07106    ), ACBD5_CHICK (Q5ZHQ6    ), ACBD5_HUMAN (Q5T8D3    ), 
ACBD5_MOUSE (Q5XG73    ), ACBD5_PONAB (Q5R7V3    ), ACBD5_RAT   (A0FKI7    ), 
ACBD5_XENLA (Q641E3    ), ACBD5_XENTR (Q640U0    ), ACBP1_CAEEL (O01805    ), 
ACBP2_DIGLA (P81625    ), ACBP2_SACMO (P61868    ), ACBP2_SACPS (P61867    ), 
ACBP3_CAEEL (Q20507    ), ACBP_ANAPL  (P45882    ), ACBP_BOVIN  (P07107    ), 
ACBP_BRANA  (Q39315    ), ACBP_CANLF  (Q9TQX6    ), ACBP_CHAVI  (P82934    ), 
ACBP_CHICK  (Q9PRL8    ), ACBP_DICDI  (Q5FXM5    ), ACBP_DROME  (P42281    ), 
ACBP_FRIAG  (O22643    ), ACBP_GOSHI  (Q39779    ), ACBP_HUMAN  (P07108    ), 
ACBP_MANSE  (P31824    ), ACBP_MOUSE  (P31786    ), ACBP_PELRI  (P45883    ), 
ACBP_PIG    (P12026    ), ACBP_RABIT  (Q8WN94    ), ACBP_RAT    (P11030    ), 
ACBP_RICCO  (O04066    ), ACBP_YEAST  (P31787    ), DBIL5_BOVIN (Q9MZG3    ), 
DBIL5_MOUSE (O09035    ), DBIL5_RAT   (P56702    ), ECI2_HUMAN  (O75521    ), 
ECI2_MOUSE  (Q9WUR2    ), ECI2_RAT    (Q5XIC0    ), GCP60_HUMAN (Q9H3P7    ), 
GCP60_MOUSE (Q8BMP6    ), GCP60_RAT   (Q7TNY6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

ACBD6_BOVIN (A2VDR2    ), ACBD6_DANRE (Q4V8X4    ), ACBD6_DICDI (Q54GC8    ), 
ACBD6_HUMAN (Q9BR61    ), ACBD6_MOUSE (Q9D061    ), ACBD6_RAT   (Q5RJK8    ), 
ACBD6_XENLA (Q4V869    ), ACBD6_XENTR (Q66JD7    ), ACBD7_BOVIN (Q3SZF0    ), 
ACBD7_HUMAN (Q8N6N7    ), ACBD7_MOUSE (Q9D258    ), ACBP1_ARATH (Q9SM23    ), 
ACBP2_ARATH (Q9STP8    ), ACBP3_ARATH (Q9STX1    ), ACBP4_ARATH (Q9MA55    ), 
ACBP5_ARATH (Q8RWD9    ), ACBP_HYPDU  (P0C8L7    ), ACBP_SCHPO  (Q9Y7Z3    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

ACBP1_DIGLA (P81624    )

		
PDB
[Detailed view]
13 PDB

1ACA; 1HB6; 1HB8; 1NTI; 1NVL; 1ST7; 2ABD; 2CB8; 2CQU; 2FDQ; 2FJ9; 2WH5; 3FLV
» more

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