Entry: PS00880

Forthcoming changes to the profile format
General information about the entry

Entry name [info] ACB_1
Accession [info] PS00880
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00686

Name and characterization of the entry

Description [info] Acyl-CoA-binding (ACB) domain signature.
Pattern [info]
[PTLV]-[GSTA]-x-[DENQA]-x-[LMFK]-x(2)-[LIVMFY]-[YV]-[GSA]-x-[FYH]-K-Q-
[GSAV]-[STL]-x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 72.31 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
47 sequences

ACB5A_DANRE (Q502L1), ACB5B_DANRE (A5WV69), ACBD4_BOVIN (Q2KHT9), 
ACBD4_HUMAN (Q8NC06), ACBD4_PONAB (Q5R7P6), ACBD4_RAT   (Q6DGF9), 
ACBD5_BOVIN (P07106), ACBD5_CHICK (Q5ZHQ6), ACBD5_HUMAN (Q5T8D3), 
ACBD5_MOUSE (Q5XG73), ACBD5_PONAB (Q5R7V3), ACBD5_RAT   (A0FKI7), 
ACBD5_XENLA (Q641E3), ACBD5_XENTR (Q640U0), ACBP1_CAEEL (O01805), 
ACBP2_DIGLA (P81625), ACBP2_SACMO (P61868), ACBP2_SACPS (P61867), 
ACBP3_CAEEL (Q20507), ACBP_ANAPL  (P45882), ACBP_BOVIN  (P07107), 
ACBP_BRANA  (Q39315), ACBP_CANFA  (Q9TQX6), ACBP_CHAVI  (P82934), 
ACBP_CHICK  (Q9PRL8), ACBP_DICDI  (Q5FXM5), ACBP_DROME  (P42281), 
ACBP_FRIAG  (O22643), ACBP_GOSHI  (Q39779), ACBP_HUMAN  (P07108), 
ACBP_MANSE  (P31824), ACBP_MOUSE  (P31786), ACBP_PELRI  (P45883), 
ACBP_PIG    (P12026), ACBP_RABIT  (Q8WN94), ACBP_RAT    (P11030), 
ACBP_RICCO  (O04066), ACBP_YEAST  (P31787), DBIL5_BOVIN (Q9MZG3), 
DBIL5_MOUSE (O09035), DBIL5_RAT   (P56702), ECI2_HUMAN  (O75521), 
ECI2_MOUSE  (Q9WUR2), ECI2_RAT    (Q5XIC0), GCP60_HUMAN (Q9H3P7), 
GCP60_MOUSE (Q8BMP6), GCP60_RAT   (Q7TNY6)
» More

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

ACBD6_BOVIN (A2VDR2), ACBD6_DANRE (Q4V8X4), ACBD6_DICDI (Q54GC8), 
ACBD6_HUMAN (Q9BR61), ACBD6_MOUSE (Q9D061), ACBD6_RAT   (Q5RJK8), 
ACBD6_XENLA (Q4V869), ACBD6_XENTR (Q66JD7), ACBD7_BOVIN (Q3SZF0), 
ACBD7_HUMAN (Q8N6N7), ACBD7_MOUSE (Q9D258), ACBP1_ARATH (Q9SM23), 
ACBP2_ARATH (Q9STP8), ACBP3_ARATH (Q9STX1), ACBP4_ARATH (Q9MA55), 
ACBP5_ARATH (Q8RWD9), ACBP_HYPDU  (P0C8L7), ACBP_SCHPO  (Q9Y7Z3)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

ACBP1_DIGLA (P81624)

		
PDB
[Detailed view]
13 PDB

1ACA; 1HB6; 1HB8; 1NTI; 1NVL; 1ST7; 2ABD; 2CB8; 2CQU; 2FDQ; 2FJ9; 2WH5; 3FLV
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission