Entry: PS00901

General information about the entry
Entry name CYS_SYNTHASE
Accession number PS00901
Entry type PATTERN
Date OCT-1993 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00700
Name and characterization of the entry
DescriptionCysteine synthase/cystathionine beta-synthase P-phosphate attachment site.
Pattern K-x-E-x(3,4)-[PAF]-[STAGC]-x-S-[IVAPM]-K-x-R-x-[STAG]-x(2)-[LIVM].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 93 hits in 93 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 93 hits in 93 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 97.89 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 10,pyridoxal_phosphate
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CAS1_MALDO  (Q1KLZ2), CAS1_SOLTU  (Q76MX2), CAS2_MALDO  (Q1KLZ1), 
CAS2_SOLTU  (Q9FS29), CBS_DICDI   (P46794), CBS_HUMAN   (P35520), 
CBS_MACFA   (Q58H57), CBS_MOUSE   (Q91WT9), CBS_RABIT   (Q9N0V7), 
CBS_RAT     (P32232), CBS_YEAST   (P32582), CGL_ARATH   (F4K5T2), 
CYSC1_ARATH (Q9S757), CYSC_SPIOL  (Q43153), CYSK1_ARATH (P47998), 
CYSK1_BRAJU (O23733), CYSK1_ORYSJ (Q9XEA6), CYSK1_SCHPO (O59701), 
CYSK2_BRAJU (O23735), CYSK2_ORYSJ (Q9XEA8), CYSK2_SCHPO (P87131), 
CYSK4_ARATH (O22682), CYSKM_ARATH (Q43725), CYSKP_ARATH (P47999), 
CYSKP_CAPAN (P31300), CYSKP_SOLTU (O81155), CYSKP_SPIOL (P32260), 
CYSK_BACSU  (P37887), CYSK_BUCAI  (P57171), CYSK_BUCAP  (Q8KA48), 
CYSK_CITLA  (Q43317), CYSK_DICDI  (Q54CN7), CYSK_ECO57  (P0ABK6), 
CYSK_ECOLI  (P0ABK5), CYSK_EMENI  (P50867), CYSK_FLAS3  (Q59447), 
CYSK_HAEIN  (P45040), CYSK_MAIZE  (P80608), CYSK_MYCBO  (P0A535), 
CYSK_MYCLE  (O32978), CYSK_MYCTU  (P0A534), CYSK_NEIMB  (Q7DDL5), 
CYSK_SALTI  (P0A1E4), CYSK_SALTY  (P0A1E3), CYSK_SOLTU  (O81154), 
CYSK_SPIOL  (Q00834), CYSK_STAAC  (Q5HIG2), CYSK_STAAM  (P63870), 
CYSK_STAAN  (P63871), CYSK_STAAR  (Q6GJF8), CYSK_STAAS  (Q6GBX5), 
CYSK_STAAW  (P63872), CYSK_STAEQ  (Q5HRP1), CYSK_STAES  (Q8CMT6), 
CYSK_STRP6  (Q5XAQ3), CYSK_SYNY3  (P73410), CYSK_WHEAT  (P38076), 
CYSK_YEAST  (P53206), CYSM_AQUAE  (O67507), CYSM_BACSU  (O34476), 
CYSM_CAMJE  (P71128), CYSM_ECOLI  (P16703), CYSM_HELPJ  (Q9ZMW6), 
CYSM_HELPY  (P56067), CYSM_MYCBO  (P63874), CYSM_MYCTU  (P63873), 
CYSM_PSEAE  (Q9I526), CYSM_PSESY  (P48028), CYSM_SALTY  (P29848), 
CYSO_AERPE  (Q9YBL2), MCCA_BACSU  (O05393), SBNA_RALME  (Q44004), 
SBNA_RALSO  (Q8XSQ0), SBNA_STAA0  (D1GUM7), SBNA_STAA1  (A7WX68), 
SBNA_STAA2  (A6TXQ1), SBNA_STAA3  (Q2FKE3), SBNA_STAA4  (D3ERF5), 
SBNA_STAA5  (D2N3G7), SBNA_STAA8  (Q2G1N3), SBNA_STAA9  (A5INY7), 
SBNA_STAAB  (Q2YUU0), SBNA_STAAC  (Q5HJQ3), SBNA_STAAD  (D0K799), 
SBNA_STAAE  (A6QDA0), SBNA_STAAM  (Q932K9), SBNA_STAAN  (Q99X99), 
SBNA_STAAR  (Q6GKI9), SBNA_STAAS  (Q6GD09), SBNA_STAAT  (A8YZ41), 
SBNA_STAAW  (Q7A1Z6), SRPG_SYNE7  (Q59966), Y4XP_RHISN  (P55708)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
Y1077_MYCTU (Q7D8W0), Y848_MYCTU  (Q79FV4)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CYSK_CLOPA  (P81340), CYSK_POPEU  (P84538), CYSK_STAHA  (Q59918)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1FCJ; 1JBQ; 1M54; 1OAS; 1WKV; 1Z7W; 2BHS; 2ISQ; 2JC3; 2Q3D; 3DWG; 3DWI; 3VSA; 4AEC;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or