Entry: PS00914

General information about the entry

Entry name [info] SYNTAXIN
Accession [info] PS00914
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00709

Name and characterization of the entry

Description [info] Syntaxin / epimorphin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 99 in 99 different sequences
Number of true positive hits 99 in 99 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 14
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.61 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
99 sequences

PEP12_YEAST (P32854), PSY1_SCHPO  (Q9USH7), SED5_YEAST  (Q01590), 
SSO1_YEAST  (P32867), SSO2_CANAL  (Q59YF0), SSO2_YEAST  (P39926), 
STX10_HUMAN (O60499), STX11_HUMAN (O75558), STX11_MOUSE (Q9D3G5), 
STX12_HUMAN (Q86Y82), STX12_MOUSE (Q9ER00), STX12_PONAB (Q5RBW6), 
STX12_RAT   (G3V7P1), STX16_HUMAN (O14662), STX16_MOUSE (Q8BVI5), 
STX17_BOVIN (Q5E9Y2), STX17_HUMAN (P56962), STX17_MOUSE (Q9D0I4), 
STX17_RAT   (Q9Z158), STX18_DANRE (Q4VBI7), STX18_HUMAN (Q9P2W9), 
STX18_MOUSE (Q8VDS8), STX18_PONAB (Q5REB4), STX18_RAT   (Q68FW4), 
STX1A_CAEEL (O16000), STX1A_DROME (Q24547), STX1A_HUMAN (Q16623), 
STX1A_MOUSE (O35526), STX1A_PONAB (Q5R4L2), STX1A_RAT   (P32851), 
STX1B_BOVIN (P61267), STX1B_HUMAN (P61266), STX1B_MOUSE (P61264), 
STX1B_RAT   (P61265), STX1B_SHEEP (P61268), STX2_CAEEL  (Q20574), 
STX2_HUMAN  (P32856), STX2_MOUSE  (Q00262), STX2_RAT    (P50279), 
STX3_CAEEL  (Q20024), STX3_HUMAN  (Q13277), STX3_MOUSE  (Q64704), 
STX3_RAT    (Q08849), STX4_BOVIN  (Q3SWZ3), STX4_CAEEL  (P91409), 
STX4_HUMAN  (Q12846), STX4_MOUSE  (P70452), STX4_RAT    (Q08850), 
STX5_BOVIN  (Q08DB5), STX5_CAEEL  (Q20797), STX5_DROME  (Q24509), 
STX5_HUMAN  (Q13190), STX5_MOUSE  (Q8K1E0), STX5_RAT    (Q08851), 
STX6_CAEEL  (P83528), STX6_CHICK  (Q5ZL19), STX6_HUMAN  (O43752), 
STX6_MOUSE  (Q9JKK1), STX6_PONAB  (Q5R6Q2), STX6_RAT    (Q63635), 
STX7A_DICDI (Q54JY7), STX7_BOVIN  (Q3ZBT5), STX7_HUMAN  (O15400), 
STX7_MOUSE  (O70439), STX7_PONAB  (Q5R602), STX7_RAT    (O70257), 
STX_APLCA   (Q16932), SY111_ARATH (Q42374), SY112_ARATH (Q9ZPV9), 
SY121_ARATH (Q9ZSD4), SY122_ARATH (Q9SVC2), SY123_ARATH (Q9ZQZ8), 
SY124_ARATH (O64791), SY125_ARATH (Q9SXB0), SY131_ARATH (Q9SRV7), 
SY132_ARATH (Q8VZU2), SYP21_ARATH (Q39233), SYP22_ARATH (P93654), 
SYP23_ARATH (O04378), SYP31_ARATH (Q9FFK1), SYP32_ARATH (Q9LK09), 
SYP41_ARATH (O65359), SYP42_ARATH (Q9SWH4), SYP43_ARATH (Q9SUJ1), 
SYP51_ARATH (Q9SA23), SYP52_ARATH (Q94KK7), SYP61_ARATH (Q946Y7), 
SYP71_ARATH (Q9SF29), SYP72_ARATH (Q94KK6), SYP73_ARATH (Q94KK5), 
TLG1_YEAST  (Q03322), TLG2_YEAST  (Q08144), VAM3_YEAST  (Q12241)
» more

False negative sequences
14 sequences

FSV1_SCHPO  (O14222), PEP12_SCHPO (O94651), SED5_SCHPO  (O13644), 
STX8A_DICDI (Q553P5), STX8_BOVIN  (Q3T075), STX8_HUMAN  (Q9UNK0), 
STX8_MOUSE  (O88983), STX8_RAT    (Q9Z2Q7), SYP24_ARATH (Q9C615), 
SYP81_ARATH (P59277), TLG1_SCHPO  (Q9HGN3), TLG2_SCHPO  (Q9P6P1), 
UFE1_SCHPO  (O94531), UFE1_YEAST  (P41834)
» more

[Detailed view]
26 PDB

1GL2; 1HVV; 1JTH; 1KIL; 1N7S; 1SFC; 1URQ; 2M8R; 2N1T; 2NPS; 3B5N; 3C98; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 3RK2; 3RK3; 3RL0; 4JEH; 4JEU; 5CCG; 5CCH; 5CCI
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission