Entry: PS00914

General information about the entry

Entry name [info] SYNTAXIN
Accession [info] PS00914
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00709

Name and characterization of the entry

Description [info] Syntaxin / epimorphin family signature.
Pattern [info]
[RQLKA]-x(3)-[LIVMAW]-x(2)-[LIVM]-[ESHLKAGQV]-x(2)-[LIVMT]-x-[DEVMNRAST]-
[LIVMT]-x(2)-[LIVMQ]-[FSAQGVM]-x(2)-[LIVMF]-x(3)-[LIVT]-x(2)-Q-
[GADEQVST]-x(2)-[LIVMA]-[DNQTEI]-x-[LIVMF]-[DESVHAG]-x(2,3)-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.


Total number of hits 99 in 99 different sequences
Number of true positive hits 99 in 99 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 14
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.61 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
99 sequences

PEP12_YEAST (P32854), PSY1_SCHPO  (Q9USH7), SED5_YEAST  (Q01590), 
SSO1_YEAST  (P32867), SSO2_CANAL  (Q59YF0), SSO2_YEAST  (P39926), 
STX10_HUMAN (O60499), STX11_HUMAN (O75558), STX11_MOUSE (Q9D3G5), 
STX12_HUMAN (Q86Y82), STX12_MOUSE (Q9ER00), STX12_PONAB (Q5RBW6), 
STX12_RAT   (G3V7P1), STX16_HUMAN (O14662), STX16_MOUSE (Q8BVI5), 
STX17_BOVIN (Q5E9Y2), STX17_HUMAN (P56962), STX17_MOUSE (Q9D0I4), 
STX17_RAT   (Q9Z158), STX18_DANRE (Q4VBI7), STX18_HUMAN (Q9P2W9), 
STX18_MOUSE (Q8VDS8), STX18_PONAB (Q5REB4), STX18_RAT   (Q68FW4), 
STX19_BOVIN (Q0VCI2), STX19_HUMAN (Q8N4C7), STX19_MOUSE (Q8R1Q0), 
STX19_PONAB (Q5RAL4), STX1A_BOVIN (P32850), STX1A_CAEBR (A8WVD0), 
STX1A_CAEEL (O16000), STX1A_DROME (Q24547), STX1A_HUMAN (Q16623), 
STX1A_MOUSE (O35526), STX1A_PONAB (Q5R4L2), STX1A_RAT   (P32851), 
STX1B_BOVIN (P61267), STX1B_HUMAN (P61266), STX1B_MOUSE (P61264), 
STX1B_RAT   (P61265), STX1B_SHEEP (P61268), STX2_CAEEL  (Q20574), 
STX2_HUMAN  (P32856), STX2_MOUSE  (Q00262), STX2_RAT    (P50279), 
STX3_CAEEL  (Q20024), STX3_HUMAN  (Q13277), STX3_MOUSE  (Q64704), 
STX3_RAT    (Q08849), STX4_BOVIN  (Q3SWZ3), STX4_CAEEL  (P91409), 
STX4_HUMAN  (Q12846), STX4_MOUSE  (P70452), STX4_RAT    (Q08850), 
STX5_BOVIN  (Q08DB5), STX5_CAEEL  (Q20797), STX5_DROME  (Q24509), 
STX5_HUMAN  (Q13190), STX5_MOUSE  (Q8K1E0), STX5_RAT    (Q08851), 
STX6_CAEEL  (P83528), STX6_CHICK  (Q5ZL19), STX6_HUMAN  (O43752), 
STX6_MOUSE  (Q9JKK1), STX6_PONAB  (Q5R6Q2), STX6_RAT    (Q63635), 
STX7A_DICDI (Q54JY7), STX7_BOVIN  (Q3ZBT5), STX7_HUMAN  (O15400), 
STX7_MOUSE  (O70439), STX7_PONAB  (Q5R602), STX7_RAT    (O70257), 
STX_APLCA   (Q16932), SY111_ARATH (Q42374), SY112_ARATH (Q9ZPV9), 
SY121_ARATH (Q9ZSD4), SY122_ARATH (Q9SVC2), SY123_ARATH (Q9ZQZ8), 
SY124_ARATH (O64791), SY125_ARATH (Q9SXB0), SY131_ARATH (Q9SRV7), 
SY132_ARATH (Q8VZU2), SYP21_ARATH (Q39233), SYP22_ARATH (P93654), 
SYP23_ARATH (O04378), SYP31_ARATH (Q9FFK1), SYP32_ARATH (Q9LK09), 
SYP41_ARATH (O65359), SYP42_ARATH (Q9SWH4), SYP43_ARATH (Q9SUJ1), 
SYP51_ARATH (Q9SA23), SYP52_ARATH (Q94KK7), SYP61_ARATH (Q946Y7), 
SYP71_ARATH (Q9SF29), SYP72_ARATH (Q94KK6), SYP73_ARATH (Q94KK5), 
TLG1_YEAST  (Q03322), TLG2_YEAST  (Q08144), VAM3_YEAST  (Q12241)
» More

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

FSV1_SCHPO  (O14222), PEP12_SCHPO (O94651), SED5_SCHPO  (O13644), 
STX8A_DICDI (Q553P5), STX8_BOVIN  (Q3T075), STX8_HUMAN  (Q9UNK0), 
STX8_MOUSE  (O88983), STX8_RAT    (Q9Z2Q7), SYP24_ARATH (Q9C615), 
SYP81_ARATH (P59277), TLG1_SCHPO  (Q9HGN3), TLG2_SCHPO  (Q9P6P1), 
UFE1_SCHPO  (O94531), UFE1_YEAST  (P41834)
» More

PDB
[Detailed view]
22 PDB

1GL2; 1HVV; 1JTH; 1KIL; 1N7S; 1SFC; 1URQ; 2M8R; 2NPS; 3B5N; 3C98; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 3RK2; 3RK3; 3RL0; 4JEH; 4JEU
» More

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