Entry: PS00922

General information about the entry
Entry name TRANSGLYCOSYLASE
Accession number PS00922
Entry type PATTERN
Date OCT-1993 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00713
Associated ProRule PRU10071
Name and characterization of the entry
DescriptionProkaryotic transglycosylases signature.
Pattern [LIVM]-x(3)-E-S-x(3)-[AP]-x(3)-S-x(5)-G-[LIVM]-[LIVMFYW]-x-[LIVMFYW]- x(4)-[SAG].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 208 hits in 208 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 208 hits in 208 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 27
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 88.51 %
Comments
  • Taxonomic range: Bacteriophages, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
EMTAL_SHIFL (Q83RQ0), EMTA_CITK8  (A8AFS5), EMTA_CROS8  (A7MKC3), 
EMTA_ECO27  (B7UQ77), EMTA_ECO45  (B7MK90), EMTA_ECO55  (B7LGV3), 
EMTA_ECO57  (Q8XDJ7), EMTA_ECO5E  (B5YXL7), EMTA_ECO7I  (B7NUV4), 
EMTA_ECO81  (B7MTX1), EMTA_ECO8A  (B7LXA7), EMTA_ECOBW  (C4ZTN4), 
EMTA_ECODH  (B1XAN4), EMTA_ECOK1  (A1AAB6), EMTA_ECOL5  (Q0TII2), 
EMTA_ECOL6  (P59243), EMTA_ECOLC  (B1IU99), EMTA_ECOLI  (P0C960), 
EMTA_ECOLU  (B7N3Z9), EMTA_ECOSM  (B1LHX3), EMTA_ECOUT  (Q1RCQ2), 
EMTA_ENT38  (A4WBE8), EMTA_ESCF3  (B7LSJ1), EMTA_KLEP3  (B5XQ85), 
EMTA_KLEP7  (A6TAW0), EMTA_SALCH  (Q57NL3), EMTA_SALEP  (B5R2X1), 
EMTA_SALG2  (B5R901), EMTA_SALPA  (Q5PN08), EMTA_SALPB  (A9MVX1), 
EMTA_SALPC  (C0Q334), EMTA_SALPK  (B5BI54), EMTA_SALTI  (Q8XGT6), 
EMTA_SALTY  (Q7CQE4), EMTA_SHIBS  (Q31ZN3), EMTA_SHIDS  (Q32H22), 
EMTA_SHIF8  (Q0T5K7), EMTA_SHIFL  (Q83RP9), EMTA_SHISS  (Q3Z2V5), 
MLTC_ACTP2  (A3N339), MLTC_ACTP7  (B3GYW8), MLTC_ACTPJ  (B0BSH0), 
MLTC_ACTSZ  (A6VLS0), MLTC_CITK8  (A8API2), MLTC_CROS8  (A7MLX9), 
MLTC_ECO24  (A7ZR89), MLTC_ECO27  (B7UI10), MLTC_ECO45  (B7MN10), 
MLTC_ECO55  (B7LFM1), MLTC_ECO57  (Q8XCS6), MLTC_ECO5E  (B5YQG2), 
MLTC_ECO7I  (B7NI32), MLTC_ECO81  (B7MZB8), MLTC_ECO8A  (B7LYZ3), 
MLTC_ECOBW  (C5A0N2), MLTC_ECODH  (B1XFC3), MLTC_ECOHS  (A8A4A6), 
MLTC_ECOK1  (A1AFE9), MLTC_ECOL5  (Q0TDN8), MLTC_ECOL6  (P0C067), 
MLTC_ECOLC  (B1ISK6), MLTC_ECOLI  (P0C066), MLTC_ECOLU  (B7N7L9), 
MLTC_ECOSE  (B6I7A0), MLTC_ECOSM  (B1LDH3), MLTC_ECOUT  (Q1R762), 
MLTC_EDWI9  (C5BCE9), MLTC_ENT38  (A4WEA0), MLTC_ERWCT  (Q6D8K0), 
MLTC_ESCF3  (B7LPT3), MLTC_HAEDU  (Q7VKB7), MLTC_HAEI8  (Q4QMD8), 
MLTC_HAEIE  (A5UDW4), MLTC_HAEIG  (A5UHR5), MLTC_HAEIN  (P44049), 
MLTC_HAEPS  (B8F6F0), MLTC_HAES1  (Q0I513), MLTC_HAES2  (B0UWE6), 
MLTC_KLEP3  (B5XU88), MLTC_KLEP7  (A6TDX1), MLTC_MANSM  (Q65VT8), 
MLTC_PASMU  (Q9CLB8), MLTC_PHOLL  (Q7N7I2), MLTC_SALAR  (A9MQR3), 
MLTC_SALCH  (Q57K03), MLTC_SALPA  (Q5PMM0), MLTC_SALPB  (A9N4R0), 
MLTC_SALTI  (Q8Z3T9), MLTC_SALTY  (Q8ZM39), MLTC_SERP5  (A8GJ50), 
MLTC_SHIB3  (B2U178), MLTC_SHIBS  (Q31WM5), MLTC_SHIDS  (Q32C32), 
MLTC_SHIF8  (Q0T0S4), MLTC_SHIFL  (Q83Q83), MLTC_SHISS  (Q3YXF0), 
MLTC_SODGM  (Q2NRB3), MLTC_YERE8  (A1JPV7), MLTC_YERP3  (A7FEX3), 
MLTC_YERPA  (Q1CB94), MLTC_YERPB  (B2K0V2), MLTC_YERPE  (Q8ZHE6), 
MLTC_YERPG  (A9R6R2), MLTC_YERPN  (Q1CEV1), MLTC_YERPP  (A4TI58), 
MLTC_YERPS  (Q666M2), MLTD_ECOL6  (P0AEZ8), MLTD_ECOLI  (P0AEZ7), 
MLTE_BUCAI  (P57352), MLTF1_ALHEH (Q0A9W6), MLTF2_ALHEH (Q0A9T8), 
MLTF_ACTP2  (A3N214), MLTF_ACTP7  (B3GYE5), MLTF_ACTPJ  (B0BQV5), 
MLTF_AERHH  (A0KJ50), MLTF_AERS4  (A4SNZ5), MLTF_ALCBS  (Q0VRG6), 
MLTF_CELJU  (B3PLH7), MLTF_CHRSD  (Q1QZB1), MLTF_CITK8  (A8AD27), 
MLTF_COLP3  (Q47XX8), MLTF_DESOH  (A8ZWR8), MLTF_ECO11  (B3Y154), 
MLTF_ECO24  (A7ZQ01), MLTF_ECO57  (Q8XA45), MLTF_ECODH  (B1XB33), 
MLTF_ECOHS  (A8A366), MLTF_ECOK1  (A1AE89), MLTF_ECOL5  (Q0TET0), 
MLTF_ECOL6  (Q8FF25), MLTF_ECOLC  (B1IVR9), MLTF_ECOLI  (P0AGC5), 
MLTF_ECOSM  (B1LP71), MLTF_ECOUT  (Q1R8H6), MLTF_ENT38  (A4WDC7), 
MLTF_ERWCT  (Q6D237), MLTF_ERWT9  (B2VEB4), MLTF_HAEDU  (Q7VN03), 
MLTF_HAEI8  (Q4QNV4), MLTF_HAEIE  (A5UAQ3), MLTF_HAEIG  (A5UG36), 
MLTF_HAEIN  (P44587), MLTF_HAES1  (Q0I361), MLTF_HAES2  (B0UUK3), 
MLTF_HAHCH  (Q2SK06), MLTF_IDILO  (Q5QWY4), MLTF_KLEP7  (A6TCH2), 
MLTF_MARAV  (A1U3J1), MLTF_NITMU  (Q2Y6L9), MLTF_PASMU  (Q9CPJ2), 
MLTF_PHOPR  (Q6LU25), MLTF_PSE14  (Q48LX4), MLTF_PSEA7  (A6V102), 
MLTF_PSEAB  (Q02RN8), MLTF_PSEAE  (Q9HXN1), MLTF_PSEE4  (Q1I5L3), 
MLTF_PSEF5  (Q4KHS7), MLTF_PSEHT  (Q3IHZ1), MLTF_PSEMY  (A4XXV1), 
MLTF_PSEP1  (A5VZC8), MLTF_PSEPF  (Q3KHL5), MLTF_PSEPG  (B0KRE9), 
MLTF_PSEPK  (Q88P17), MLTF_PSEPW  (B1JDH3), MLTF_PSESM  (Q886W7), 
MLTF_PSEU2  (Q4ZX03), MLTF_PSEU5  (A4VP14), MLTF_SALAR  (A9MGY7), 
MLTF_SALCH  (Q57LE4), MLTF_SALPA  (Q5PIH0), MLTF_SALPB  (A9N1U5), 
MLTF_SALTI  (Q8Z4L5), MLTF_SALTY  (Q8ZN28), MLTF_SERP5  (A8GI11), 
MLTF_SHIB3  (B2TXX1), MLTF_SHIBS  (Q31XS9), MLTF_SHIDS  (Q32D14), 
MLTF_SHIF8  (Q0T1W2), MLTF_SHIFL  (P0AGC6), MLTF_SHISS  (Q3YYZ7), 
MLTF_SODGM  (Q2NS21), MLTF_SULDN  (Q30PQ0), MLTF_VIBC3  (A5F353), 
MLTF_VIBCH  (Q9KTN5), MLTF_VIBF1  (Q5E750), MLTF_VIBHB  (A7MSG2), 
MLTF_VIBPA  (Q87RW1), MLTF_VIBVU  (Q8DF80), MLTF_VIBVY  (Q7MN72), 
MLTF_YERE8  (A1JKM2), MLTF_YERP3  (A7FFU9), MLTF_YERPA  (Q1C5E6), 
MLTF_YERPB  (B2KA37), MLTF_YERPE  (Q74SQ6), MLTF_YERPG  (A9R413), 
MLTF_YERPN  (Q1CKD3), MLTF_YERPP  (A4TMX8), MLTF_YERPS  (Q667W0), 
MLTF_YERPY  (B1JRW4), SLT_ECO57   (P0AGC4), SLT_ECOLI   (P0AGC3), 
SLT_HAEIN   (P44888), SLT_SALTY   (P39434), TBTA_ALTSM  (P32820), 
VIVD_BPT7   (P03726), VP07_BPPRD  (P27380), YJBJ_BACSU  (O31608), 
YOMI_BACSU  (O31976)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
MLTE_BUCBP  (Q89AM2), MLTF_ACTSZ  (A6VMD7), MLTF_ALTMD  (B4RVK5), 
MLTF_CROS8  (A7MGZ5), MLTF_MAGSM  (A0L862), MLTF_MANSM  (Q65RJ5), 
MLTF_MARMM  (Q0AQY9), MLTF_METFK  (Q1H288), MLTF_SACD2  (Q21KP0), 
MLTF_SHEAM  (A1S850), MLTF_SHEB5  (A3D6V0), MLTF_SHEB8  (A6WQN7), 
MLTF_SHEB9  (A9KWW4), MLTF_SHEDO  (Q12PR8), MLTF_SHEFN  (Q085S2), 
MLTF_SHEHH  (B0TLJ6), MLTF_SHELP  (A3QCH2), MLTF_SHEON  (Q8EC56), 
MLTF_SHEPA  (A8H256), MLTF_SHEPC  (A4Y8T1), MLTF_SHESA  (A0KUK5), 
MLTF_SHESH  (A8FY01), MLTF_SHESM  (Q0HKV0), MLTF_SHESR  (Q0HX48), 
MLTF_SHESW  (A1RHR2), MLTF_SHEWM  (B1KLC4), MLTF_THIDA  (Q3SJH8)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
SLT_ENTCL   (P39433)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1QSA; 1QTE; 1SLY; 2Y8P; 3T36; 4HJV;

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