Entry: PS00940

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General information about the entry

Entry name [info] GAMMA_THIONIN
Accession [info] PS00940
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00725

Name and characterization of the entry

Description [info] Gamma-thionins family signature.
Pattern [info]
[KRGAQS]-x-C-x(3)-[SVA]-x(2)-[FYWH]-x(1,2)-[GF]-x-C-x(5)-C-x(3)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 7
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.25 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 3
Site [info] disulfide at position 11
Site [info] disulfide at position 13
Site [info] disulfide at position 15
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

DEF01_ARATH (Q9ZUL7), DEF02_ARATH (Q39182), DEF03_ARATH (P82781), 
DEF04_ARATH (Q41914), DEF05_ARATH (Q9C947), DEF07_ARATH (P82784), 
DEF08_ARATH (P82782), DEF09_ARATH (P82785), DEF10_ARATH (Q9ZUL8), 
DEF11_TRIKH (P84965), DEF12_TRIMO (P84964), DEF13_ARATH (P30224), 
DEF14_ARATH (O80995), DEF15_ARATH (O80994), DEF16_ARATH (Q9FI23), 
DEF17_ARATH (Q9FI22), DEF19_ARATH (P82787), DEF1_BRACM  (P30227), 
DEF1_BRANA  (P69240), DEF1_CAPAN  (Q43413), DEF1_ECHCG  (P86518), 
DEF1_HEUSA  (P0C8Y5), DEF1_HORVU  (P20230), DEF1_MAIZE  (P81008), 
DEF1_NICPA  (O24115), DEF1_NIGSA  (P86972), DEF1_PEA    (P81929), 
DEF1_PINSY  (A4L7R7), DEF1_RAPSA  (P69241), DEF1_SINAL  (P30231), 
DEF1_SORBI  (P21923), DEF1_TRIKH  (P84963), DEF1_VICFA  (P81456), 
DEF1_VIGUN  (P83399), DEF1_WHEAT  (P20158), DEF21_SORBI (Q09198), 
DEF2A_SINAL (P30232), DEF2B_SINAL (Q10989), DEF2_BRACM  (P30228), 
DEF2_CAPAN  (O65740), DEF2_ECHCG  (P86519), DEF2_MAIZE  (P81009), 
DEF2_NIGSA  (P86973), DEF2_PEA    (P81930), DEF2_PINSY  (A4L7R8), 
DEF2_RAPSA  (P30230), DEF2_SORBI  (P21924), DEF2_TRIKH  (P84968), 
DEF2_VICFA  (P81457), DEF2_WHEAT  (P20159), DEF3_BRANA  (Q39313), 
DEF3_RAPSA  (O24332), DEF3_SORBI  (P21925), DEF3_TRIKH  (P84970), 
DEF4_RAPSA  (O24331), DEF4_TRIKH  (P84971), DEF5_TRIKH  (P84966), 
DEF61_TRIKH (P84969), DEF6_TRIKH  (P84967), DEFD2_SPIOL (P81571), 
DEFD7_SPIOL (P81573), DEF_LENCC   (B3F051), DEF_NELNU   (A3FPF2), 
DEF_NICAL   (Q8GTM0), DEF_PETIN   (Q40901), DEF_SOYBN   (Q07502), 
DEF_TOBAC   (P32026), DEF_VIGUN   (P18646), DF322_SOLTU (P20346), 
DFAX1_BETVU (P81493), DFAX2_BETVU (P82010), DFSD2_HELAN (P82659), 
SF18_HELAN  (P22357)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

ALL1_ARTVU  (Q84ZX5), DEF06_ARATH (Q9FFP8), DEF18_ARATH (Q9FZ31), 
DEF2_VIGUN  (P84920), DEF_GYMCO   (B5LZ79), DF230_PEA   (Q01783), 
DF39_PEA    (Q01784)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

DEF2_BRANA  (P30226), DEF_PHACN   (P84785), DEF_VIGUS   (P84868)

		
PDB
[Detailed view]
9 PDB

1AYJ; 1GPS; 1GPT; 1JKZ; 1MR4; 2LJ7; 4AAZ; 4AB0; 4CQK

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