Entry: PS00940

General information about the entry

Entry name [info] GAMMA_THIONIN
Accession [info] PS00940
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00725

Name and characterization of the entry

Description [info] Gamma-thionins family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 7
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.36 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 3
Site [info] disulfide at position 11
Site [info] disulfide at position 13
Site [info] disulfide at position 15
Version [info] 1

Cross-references [info]

True positive sequences
74 sequences

DEF01_ARATH (Q9ZUL7), DEF02_ARATH (Q39182), DEF03_ARATH (P82781), 
DEF04_ARATH (Q41914), DEF05_ARATH (Q9C947), DEF07_ARATH (P82784), 
DEF08_ARATH (P82782), DEF09_ARATH (P82785), DEF10_ARATH (Q9ZUL8), 
DEF11_TRIKH (P84965), DEF12_TRIMO (P84964), DEF13_ARATH (P30224), 
DEF14_ARATH (O80995), DEF15_ARATH (O80994), DEF16_ARATH (Q9FI23), 
DEF17_ARATH (Q9FI22), DEF19_ARATH (P82787), DEF1_BRACM  (P30227), 
DEF1_BRANA  (P69240), DEF1_CAPAN  (Q43413), DEF1_ECHCG  (P86518), 
DEF1_HEUSA  (P0C8Y5), DEF1_HORVU  (P20230), DEF1_MAIZE  (P81008), 
DEF1_NICPA  (O24115), DEF1_NIGSA  (P86972), DEF1_PEA    (P81929), 
DEF1_PINSY  (A4L7R7), DEF1_RAPSA  (P69241), DEF1_SINAL  (P30231), 
DEF1_SORBI  (P21923), DEF1_TRIKH  (P84963), DEF1_VICFA  (P81456), 
DEF1_VIGUN  (P83399), DEF1_WHEAT  (P20158), DEF21_SORBI (Q09198), 
DEF2A_SINAL (P30232), DEF2B_SINAL (Q10989), DEF2_ARAHY  (B3EWP4), 
DEF2_BRACM  (P30228), DEF2_CAPAN  (O65740), DEF2_ECHCG  (P86519), 
DEF2_MAIZE  (P81009), DEF2_NIGSA  (P86973), DEF2_PEA    (P81930), 
DEF2_PINSY  (A4L7R8), DEF2_RAPSA  (P30230), DEF2_SORBI  (P21924), 
DEF2_TRIKH  (P84968), DEF2_VICFA  (P81457), DEF2_WHEAT  (P20159), 
DEF3_BRANA  (Q39313), DEF3_RAPSA  (O24332), DEF3_SORBI  (P21925), 
DEF3_TRIKH  (P84970), DEF4_RAPSA  (O24331), DEF4_TRIKH  (P84971), 
DEF5_TRIKH  (P84966), DEF61_TRIKH (P84969), DEF6_TRIKH  (P84967), 
DEFD2_SPIOL (P81571), DEFD7_SPIOL (P81573), DEF_LENCC   (B3F051), 
DEF_NELNU   (A3FPF2), DEF_NICAL   (Q8GTM0), DEF_PETIN   (Q40901), 
DEF_SOYBN   (Q07502), DEF_TOBAC   (P32026), DEF_VIGUN   (P18646), 
DF322_SOLTU (P20346), DFAX1_BETVU (P81493), DFAX2_BETVU (P82010), 
DFSD2_HELAN (P82659), SF18_HELAN  (P22357)
» more

False negative sequences
7 sequences

DEF2_VIGUN  (P84920), DEF_GYMCO   (B5LZ79), DF230_PEA   (Q01783), 
DF39_PEA    (Q01784)
» more

'Partial' sequences
3 sequences

DEF2_BRANA  (P30226), DEF_PHACN   (P84785), DEF_VIGUS   (P84868)

[Detailed view]
10 PDB

1AYJ; 1GPS; 1GPT; 1JKZ; 1MR4; 2LJ7; 2N2Q; 4AAZ; 4AB0; 4CQK

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission