Entry: PS00950

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General information about the entry

Entry name [info] BACTERIAL_OPSIN_1
Accession [info] PS00950
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00291

Name and characterization of the entry

Description [info] Bacterial rhodopsins signature 1.
Pattern [info]
R-Y-x-[DT]-W-x-[LIVMF]-[ST]-[TV]-P-[LIVM]-[LIVMNQ]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 41 in 41 different sequences
Number of true positive hits 41 in 41 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

BAC3_HALVA  (Q48334), BACH_HALHM  (P33970), BACH_HALHP  (Q48315), 
BACH_HALHS  (Q48314), BACH_HALMA  (Q5V1N0), BACH_HALS3  (B0R2U4), 
BACH_HALS4  (O93741), BACH_HALSA  (P0DMH7), BACH_HALSD  (O93742), 
BACH_HALSS  (P33742), BACH_HALVA  (P94853), BACH_NATPH  (P15647), 
BACR1_HALC1 (P69051), BACR1_HALMA (Q5UXY6), BACR1_HALSS (P69052), 
BACR1_HALWC (G0LFX8), BACR1_HALWD (Q18DH8), BACR2_HALMA (Q5V0R5), 
BACR2_HALS2 (P29563), BACR3_HALSD (P96787), BACRM_HALWD (Q18DH5), 
BACR_HALAR  (Q57101), BACR_HALHM  (P33969), BACR_HALHP  (P33971), 
BACR_HALHS  (P33972), BACR_HALS4  (O93740), BACR_HALSA  (P02945), 
BACR_HALSR  (Q53496), BACR_HALVA  (P94854), BACS1_HALMA (Q5UXM9), 
BACS1_HALS3 (B0R633), BACS1_HALSA (P0DMH8), BACS1_HALSS (P33743), 
BACS2_HALMA (Q5V5V3), BACS2_HALSA (P71411), BACS2_HALVA (P42197), 
BACS2_NATPH (P42196), BACS_HALSD  (O93743), NOP1_NEUCR  (Q9UW81), 
PRRB_PRB02  (Q9AFF7), PRRG_PRB01  (Q9F7P4)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

BACH_HALAR  (Q53461)

		
PDB
[Detailed view]
104 PDB

1AP9; 1AT9; 1BM1; 1BRD; 1BRR; 1BRX; 1C3W; 1C8R; 1C8S; 1CWQ; 1DZE; 1E0P; 1E12; 1F4Z; 1F50; 1FBB; 1FBK; 1GU8; 1GUE; 1H2S; 1H68; 1IW6; 1IW9; 1IXF; 1JGJ; 1KG8; 1KG9; 1KGB; 1KME; 1L0M; 1M0K; 1M0L; 1M0M; 1O0A; 1P8H; 1P8I; 1P8U; 1PXR; 1PXS; 1PY6; 1Q5I; 1QHJ; 1QKO; 1QKP; 1QM8; 1R2N; 1R84; 1S51; 1S52; 1S53; 1S54; 1TN0; 1TN5; 1UAZ; 1UCQ; 1VGO; 1VJM; 1X0I; 1X0K; 1X0S; 1XJI; 2AT9; 2BRD; 2EI4; 2F93; 2F95; 2I1X; 2I20; 2I21; 2JAF; 2JAG; 2L6X; 2NTU; 2NTW; 2WJK; 2WJL; 2Z55; 2ZFE; 2ZZL; 3COC; 3HAN; 3HAP; 3HAQ; 3HAR; 3HAS; 3MBV; 3NS0; 3NSB; 3QAP; 3QBG; 3QBI; 3QBK; 3QBL; 3QDC; 3T45; 3UTV; 3UTW; 3UTX; 3UTY; 3VVK; 4FPD; 4HWL; 4HYX; 4JR8
» More

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