Entry: PS00959

General information about the entry

Entry name [info] HISTONE_H3_2
Accession [info] PS00959
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00287

Name and characterization of the entry

Description [info] Histone H3 signature 2.
Pattern [info] 
P-F-x-[RA]-L-[VA]-[KRQ]-[DEG]-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 178 in 178 different sequences
Number of true positive hits 178 in 178 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 21
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.18 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 178 sequences 

CENPA_ASHGO (Q75DE4    ), CENPA_BOVIN (P49449    ), CENPA_CANAL (Q59LN9    ), 

CENPA_DANRE (Q803H4    ), CENPA_HUMAN (P49450    ), CENPA_KAZSE (Q0MXD0    ), 
CENPA_KLULA (Q6CTI2    ), CENPA_KLUMA (Q0MTC0    ), CENPA_MILFA (Q0MXD1    ), 
CENPA_NEUCR (Q7RXR3    ), CENPA_XENLA (Q569M3    ), CENPA_XENTR (Q28I31    ), 
CENPA_YEAST (P36012    ), H31_BOVIN   (P68432    ), H31_CANAL   (Q59VN2    ), 
H31_CHLRE   (Q42681    ), H31_DEBHA   (Q6BRZ5    ), H31_HUMAN   (P68431    ), 
H31_LODEL   (A5DWE2    ), H31_MOUSE   (P68433    ), H31_MUSPA   (Q6LBF0    ), 
H31_PICGU   (A5DFC5    ), H31_PICST   (A3LXD5    ), H31_RAT     (Q6LED0    ), 
H31_SCHPO   (P09988    ), H31_STYLE   (P81195    ), H31_TETPY   (P69149    ), 
H31_TETTH   (P69150    ), H31_USTMA   (Q4P7J7    ), H32_ARATH   (P59226    ), 
H32_ASPOF   (Q6LBE3    ), H32_BOVIN   (P84227    ), H32_BRANA   (Q6LCK1    ), 
H32_CAIMO   (P84230    ), H32_CHICK   (P84229    ), H32_CHLRE   (Q6LCW8    ), 
H32_CICIN   (Q5MYA4    ), H32_CRILO   (Q64400    ), H32_DANRE   (Q4QRF4    ), 
H32_ENCAL   (P08903    ), H32_EUPES   (Q71T45    ), H32_HUMAN   (Q71DI3    ), 
H32_ICTBU   (P84231    ), H32_LILLO   (Q402E1    ), H32_MAIZE   (P69246    ), 
H32_MEDSA   (P68429    ), H32_MOUSE   (P84228    ), H32_MUSPA   (Q6LBE8    ), 
H32_ONCMY   (P84234    ), H32_ONOVI   (P68430    ), H32_ORYSI   (A2Y533    ), 
H32_ORYSJ   (Q2RAD9    ), H32_PEA     (P68427    ), H32_PETCR   (P69248    ), 
H32_PORAF   (P84232    ), H32_TOBAC   (Q76MV0    ), H32_USTMA   (Q4PB04    ), 
H32_WHEAT   (P68428    ), H32_XENLA   (P84233    ), H32_XENTR   (Q28D37    ), 
H331_CAEEL  (Q10453    ), H332_CAEEL  (Q9U281    ), H33A_DICDI  (O15819    ), 
H33A_LILLO  (Q402E2    ), H33B_DICDI  (Q55BN9    ), H33B_LILLO  (Q2Z2F4    ), 
H33C_DICDI  (Q55BP0    ), H33L1_CAEEL (Q27490    ), H33L2_CAEEL (Q27532    ), 
H33L3_CAEEL (Q27489    ), H33_ARATH   (P59169    ), H33_BOVIN   (Q5E9F8    ), 
H33_CANAL   (Q5ADQ0    ), H33_CAPAN   (Q6RUR1    ), H33_CHICK   (P84247    ), 
H33_CHLRE   (P50564    ), H33_DANRE   (Q6PI20    ), H33_DEBHA   (Q6BMU4    ), 
H33_DROHY   (P84250    ), H33_DROME   (P84249    ), H33_GOSHI   (Q71V89    ), 
H33_HORVU   (P06353    ), H33_HUMAN   (P84243    ), H33_LODEL   (A5E094    ), 
H33_LOLMU   (Q3C2E5    ), H33_LOLTE   (P69245    ), H33_MEDSA   (P69244    ), 
H33_MOUSE   (P84244    ), H33_ORYCO   (Q71U98    ), H33_ORYSI   (A2XHJ3    ), 
H33_ORYSJ   (Q0JCT1    ), H33_PICGU   (A5DG57    ), H33_PICST   (A3GHN6    ), 
H33_PIG     (Q71LE2    ), H33_PINPS   (Q711T2    ), H33_PONAB   (Q5RCC9    ), 
H33_RABIT   (P84246    ), H33_RAT     (P84245    ), H33_SCHPO   (P10651    ), 
H33_SPISO   (P84248    ), H33_STYLE   (P81197    ), H33_TETPY   (P15512    ), 
H33_TETTS   (P41353    ), H33_TOBAC   (Q76N23    ), H33_TRIPS   (Q8WSF1    ), 
H33_VITVI   (Q71H73    ), H33_XENLA   (Q6PI79    ), H33_XENTR   (Q6P823    ), 
H34_STYLE   (P81198    ), H34_TETTS   (Q22RG7    ), H35_STYLE   (P81199    ), 
H36_STYLE   (P81200    ), H37_STYLE   (P81201    ), H38_STYLE   (P81202    ), 
H39_STYLE   (P81196    ), H3CL_BOVIN  (Q3SZB8    ), H3C_BOVIN   (A5PK61    ), 
H3C_CAIMO   (P06902    ), H3C_HUMAN   (Q6NXT2    ), H3C_MOUSE   (P02301    ), 
H3C_XENLA   (P02302    ), H3L1_ARATH  (Q9FX60    ), H3L2_ARATH  (Q9FXI7    ), 
H3L3_ARATH  (Q9LR02    ), H3L4_ARATH  (Q9LXU8    ), H3L5_ARATH  (Q9FKQ3    ), 
H3_ACRFO    (P22843    ), H3_AJECA    (Q9P427    ), H3_ASHGO    (Q757N1    ), 
H3_ASPCL    (A1CP80    ), H3_ASPFU    (P61832    ), H3_ASPNC    (A2QRR5    ), 
H3_ASPOR    (Q2UCQ0    ), H3_ASPTN    (Q0D0E8    ), H3_CAEEL    (P08898    ), 
H3_CANGA    (P61833    ), H3_CHAGB    (Q6DL03    ), H3_CHITH    (P84238    ), 
H3_COCIM    (Q1E225    ), H3_CRYNB    (P0CO05    ), H3_CRYNJ    (P0CO04    ), 
H3_DERIM    (P69071    ), H3_DROHY    (P84236    ), H3_DROME    (P02299    ), 
H3_EMENI    (P23753    ), H3_ENTHI    (Q06196    ), H3_EUPCR    (P90543    ), 
H3_GIBZE    (Q4IER8    ), H3_GRIJA    (Q7XYZ0    ), H3_HYPJE    (P61835    ), 
H3_KLULA    (P61831    ), H3_LEIIN    (P40285    ), H3_LYTPI    (P69072    ), 
H3_MAGO7    (A4RCX7    ), H3_MARPO    (Q5DWI3    ), H3_MASBA    (Q9U7D1    ), 
H3_MORAP    (Q9HDN1    ), H3_NEOFI    (A1D240    ), H3_NEUCR    (P07041    ), 
H3_PARLI    (P69073    ), H3_PHANO    (Q0UY45    ), H3_PISBR    (P69074    ), 
H3_PISOC    (P69075    ), H3_PLADU    (P84235    ), H3_PSAMI    (P69076    ), 
H3_PYCHE    (P69077    ), H3_SOLST    (P69078    ), H3_STRDR    (P69079    ), 
H3_STRPU    (P06352    ), H3_TALFU    (P61834    ), H3_TIGCA    (P84237    ), 
H3_URECA    (P84239    ), H3_VOLCA    (P08437    ), H3_YARLI    (Q6C0C4    ), 
H3_YEAST    (P61830    ), H3_ZYGBA    (P61836    ), HCP3L_CAEEL (P34440    ), 
HCP3_CAEEL  (P34470    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

CENPA_CHICK (Q6XXM1    ), CENPA_CRIGR (Q8R565    ), CENPA_MOUSE (O35216    ), 

CENPA_SCHPO (Q9Y812    ), CENPA_YARLI (Q6CER9    ), CID_DROME   (Q9V6Q2    ), 
H31T_HUMAN  (Q16695    ), H31_ENCCU   (Q8SS77    ), H3L_ENCCU   (Q8SQP3    ), 
H3V1_DICDI  (Q54F38    ), H3V2_DICDI  (Q54Z07    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 21 sequences 

H32_TETAM   (P69110    ), H32_TETAU   (P69111    ), H32_TETBO   (P17319    ), 

H32_TETCA   (P69112    ), H32_TETCU   (P69113    ), H32_TETEL   (P69114    ), 
H32_TETFU   (P69115    ), H32_TETHY   (P69116    ), H32_TETLE   (P69117    ), 
H32_TETMA   (P69118    ), H32_TETMI   (P69119    ), H32_TETNA   (P69120    ), 
H32_TETNI   (P69121    ), H32_TETPA   (P69123    ), H32_TETPI   (P69124    ), 
H32_TETPR   (P69122    ), H32_TETRO   (P69125    ), H32_TETSO   (P69126    ), 
H32_TETTR   (P69127    ), H3_LITVA    (P83864    ), H3_NARPS    (P80553    )
» more

PDB
[Detailed view]		 166 PDB

1AOI; 1EQZ; 1F66; 1HIO; 1HQ3; 1ID3; 1KX3; 1KX4; 1KX5; 1M18; 1M19; 1M1A; 1P34; 1P3A; 1P3B; 1P3F; 1P3G; 1P3I; 1P3K; 1P3L; 1P3M; 1P3O; 1P3P; 1S32; 1TZY; 1U35; 1ZBB; 1ZLA; 2ARO; 2CV5; 2F8N; 2FJ7; 2HIO; 2HUE; 2IO5; 2L5A; 2LY8; 2NQB; 2NZD; 2PYO; 2YFV; 2YFW; 3AFA; 3AN2; 3AV1; 3AV2; 3AYW; 3AZE; 3AZF; 3AZG; 3AZH; 3AZI; 3AZJ; 3AZK; 3AZL; 3AZM; 3AZN; 3B6F; 3B6G; 3C1B; 3C1C; 3C9K; 3KUY; 3KWQ; 3KXB; 3LEL; 3LJA; 3LZ0; 3LZ1; 3MGP; 3MGQ; 3MGR; 3MGS; 3MNN; 3MVD; 3NQJ; 3NQU; 3O62; 3R45; 3REH; 3REI; 3REJ; 3REK; 3REL; 3TU4; 3UT9; 3UTA; 3UTB; 3W96; 3W97; 3W98; 3W99; 3WA9; 3WAA; 3WKJ; 3WTP; 3X1S; 3X1T; 3X1U; 3X1V; 4EO5; 4H9N; 4H9O; 4H9P; 4H9Q; 4H9R; 4H9S; 4HGA; 4J8U; 4J8V; 4J8W; 4J8X; 4JJN; 4KGC; 4KUD; 4LD9; 4QLC; 4R8P; 4UUZ; 4WU8; 4WU9; 4X23; 4XUJ; 4XZQ; 4YM5; 4YM6; 4YS3; 4Z2M; 4Z5T; 4Z66; 4ZBJ; 4ZUX; 5AV5; 5AV6; 5AV8; 5AV9; 5AVB; 5AVC; 5AY8; 5B0Y; 5B0Z; 5B24; 5B2I; 5B2J; 5B31; 5B32; 5B33; 5B40; 5BNV; 5BNX; 5BO0; 5BS7; 5BSA; 5C3I; 5CP6; 5CPI; 5CPJ; 5CPK; 5DNM; 5DNN; 5E5A; 5F99; 5HQ2; 5JA4; 5KDM; 5KGF
» more

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