Entry: PS00969

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General information about the entry

Entry name [info] ANTENNA_COMP_BETA
Accession [info] PS00969
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00748

Name and characterization of the entry

Description [info] Antenna complexes beta subunits signature.
Pattern [info]
[EQ]-x(4)-[HGQ]-x(5)-[GSTA]-x(3)-[FYV]-x(3)-[AG]-x(2)-[AV]-H-x(7)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 97.14 %
Recall (true positives / (true positives + false negatives)) 97.14 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

LHB1_HALHL  (P80104), LHB1_PHAMO  (P95673), LHB1_RHOAC  (P35094), 
LHB1_RHOCA  (P02950), LHB1_RHOPA  (P35106), LHB1_RHOS4  (Q3J1A3), 
LHB1_RHOSH  (P0C0Y1), LHB1_RHOTE  (P80590), LHB1_RUBGE  (P0DJO1), 
LHB1_RUBGI  (I0HUL8), LHB2_HALHL  (P80105), LHB2_PHAMO  (P95674), 
LHB2_RHOAC  (P35095), LHB2_RHOCA  (P07368), LHB2_RHOPA  (P35107), 
LHB2_RHOS4  (Q3J145), LHB2_RHOSH  (P0C0Y2), LHB2_RHOSU  (P95654), 
LHB2_RHOTE  (P80591), LHB3_RHOAC  (P35096), LHB3_RHOPA  (P35108), 
LHB3_RUBGE  (P72281), LHB4_RHOAC  (P35097), LHB4_RHOPA  (P35109), 
LHB5_RHOAC  (P26790), LHB6_RHOAC  (P35098), LHB7_RHOAC  (P35099), 
LHB_AFIMA   (P80260), LHB_BLAVI   (P04124), LHB_CHLAA   (P09927), 
LHB_RHORT   (Q2RQ23), LHB_RHORU   (P0C190), LHB_RHOTE   (P80587), 
LHB_ROSDO   (P26274)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

LHB2_HALHR  (P11696)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

LHB1_HALHR  (P80106)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

LOZEN_DROME (Q9W349)

		
PDB
[Detailed view]
10 PDB

1DX7; 1IJD; 1JO5; 1KZU; 1LGH; 1NKZ; 1WRG; 2FKW; 4JC9; 4JCB

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