Entry: PS00969

General information about the entry

Entry name [info] ANTENNA_COMP_BETA
Accession [info] PS00969
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00748

Name and characterization of the entry

Description [info] Antenna complexes beta subunits signature.
Pattern [info]
[EQ]-x(4)-[HGQ]-x(5)-[GSTA]-x(3)-[FYV]-x(3)-[AG]-x(2)-[AV]-H-x(7)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 97.14 %
Recall (true positives / (true positives + false negatives)) 97.14 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

LHB1_HALHL  (P80104    ), LHB1_PHAMO  (P95673    ), LHB1_RHOAC  (P35094    ), 
LHB1_RHOCA  (P02950    ), LHB1_RHOPA  (P35106    ), LHB1_RHOS4  (Q3J1A3    ), 
LHB1_RHOSH  (P0C0Y1    ), LHB1_RHOTE  (P80590    ), LHB1_RUBGE  (P0DJO1    ), 
LHB1_RUBGI  (I0HUL8    ), LHB2_HALHL  (P80105    ), LHB2_PHAMO  (P95674    ), 
LHB2_RHOAC  (P35095    ), LHB2_RHOCA  (P07368    ), LHB2_RHOPA  (P35107    ), 
LHB2_RHOS4  (Q3J145    ), LHB2_RHOSH  (P0C0Y2    ), LHB2_RHOSU  (P95654    ), 
LHB2_RHOTE  (P80591    ), LHB3_RHOAC  (P35096    ), LHB3_RHOPA  (P35108    ), 
LHB3_RUBGE  (P72281    ), LHB4_RHOAC  (P35097    ), LHB4_RHOPA  (P35109    ), 
LHB5_RHOAC  (P26790    ), LHB6_RHOAC  (P35098    ), LHB7_RHOAC  (P35099    ), 
LHB_AFIMA   (P80260    ), LHB_BLAVI   (P04124    ), LHB_CHLAA   (P09927    ), 
LHB_RHORT   (Q2RQ23    ), LHB_RHORU   (P0C190    ), LHB_RHOTE   (P80587    ), 
LHB_ROSDO   (P26274    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

LHB2_HALHR  (P11696    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

LHB1_HALHR  (P80106    )

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

LOZEN_DROME (Q9W349    )

		
PDB
[Detailed view]
8 PDB

1DX7; 1IJD; 1JO5; 1KZU; 1LGH; 1NKZ; 1WRG; 2FKW

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission