Entry: PS00983

General information about the entry

Entry name [info] LY6_UPAR
Accession [info] PS00983
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); JUN-1994 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00756

Name and characterization of the entry

Description [info] Ly-6 / u-PAR domain signature.
Pattern [info]
[EQR]-C-[LIVMFYAH]-x-C-x(5,8)-C-x(3,8)-[EDNQSTV]-C-{C}-x(5)-C-
x(12,24)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 50 in 34 different sequences
Number of true positive hits 50 in 34 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 48
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 51.02 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 3
Site [info] disulfide at position 2
Site [info] disulfide at position 5
Site [info] disulfide at position 7
Site [info] disulfide at position 10
Site [info] disulfide at position 13
Site [info] disulfide at position 15
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

CD59_AOTTR  (P51447    ), CD59_CALSQ  (P46657    ), CD59_CHLAE  (Q28216    ), 
CD59_HUMAN  (P13987    ), CD59_MACFA  (Q8SQ46    ), CD59_PAPSP  (Q28785    ), 
CD59_PIG    (O62680    ), CD59_PONAB  (Q5R510    ), CD59_RAT    (P27274    ), 
CD59_SHV21  (Q00996    ), GML_HUMAN   (Q99445    ), HDBP1_MOUSE (Q9D1N2    ), 
LY6A_MOUSE  (P05533    ), LY6C1_MOUSE (P0CW02    ), LY6C2_MOUSE (P0CW03    ), 
LY6D_BOVIN  (Q148C3    ), LY6D_HUMAN  (Q14210    ), LY6D_MOUSE  (P35459    ), 
LY6F_MOUSE  (P35460    ), LY6G_MOUSE  (P35461    ), LY6I_MOUSE  (Q9WU67    ), 
LYPD2_HUMAN (Q6UXB3    ), LYPD5_HUMAN (Q6UWN5    ), LYPD5_MOUSE (Q9D7Z7    ), 
PSCA_MOUSE  (P57096    ), SLUR1_MOUSE (Q9Z0K7    ), UPAR_AOTTR  (Q9GK77    ), 
UPAR_BOVIN  (Q05588    ), UPAR_CHLAE  (Q9GK79    ), UPAR_HUMAN  (Q03405    ), 
UPAR_MACFA  (Q9GK78    ), UPAR_MOUSE  (P35456    ), UPAR_PANTR  (Q9GK80    ), 
UPAR_RAT    (P49616    )
» more

UniProtKB/Swiss-Prot
False negative sequences
48 sequences

CD177_HUMAN (Q8N6Q3    ), CD59A_MOUSE (O55186    ), CD59B_MOUSE (P58019    ), 
CD59_RABIT  (O77541    ), CD59_SAISC  (P47777    ), LPD6B_HUMAN (Q8NI32    ), 
LPD6B_MOUSE (Q9D7F2    ), LY65B_HUMAN (Q8NDX9    ), LY65B_MOUSE (Q8K1T4    ), 
LY65B_RAT   (Q6MG53    ), LY65C_CANLF (Q9XSV5    ), LY65C_HUMAN (Q5SRR4    ), 
LY65C_MACMU (Q863H0    ), LY65C_MOUSE (Q8K1T5    ), LY65C_RAT   (Q8CHN2    ), 
LY66C_BOVIN (A0JNL5    ), LY66C_HUMAN (O95867    ), LY66C_MOUSE (Q9Z1Q4    ), 
LY66D_HUMAN (O95868    ), LY66D_MOUSE (Q9Z1Q3    ), LY66D_RAT   (Q6MG58    ), 
LY6E_CHICK  (Q90986    ), LY6E_HUMAN  (Q16553    ), LY6E_MOUSE  (Q64253    ), 
LY6H_HUMAN  (O94772    ), LY6H_MOUSE  (Q9WUC3    ), LYPD1_HUMAN (Q8N2G4    ), 
LYPD1_MOUSE (Q8BLC3    ), LYPD1_RAT   (Q66H42    ), LYPD2_MOUSE (Q9DD23    ), 
LYPD3_HUMAN (O95274    ), LYPD3_MOUSE (Q91YK8    ), LYPD3_RAT   (O55162    ), 
LYPD4_BOVIN (Q32LD3    ), LYPD4_HUMAN (Q6UWN0    ), LYPD4_MOUSE (Q8BVP6    ), 
PSCA_HUMAN  (O43653    ), SACA4_BOVIN (Q32PB3    ), SACA4_HUMAN (Q8TDM5    ), 
SACA4_MOUSE (Q80ZQ0    ), SLUR1_HUMAN (P55000    ), SSLP1_BOVIN (P83107    ), 
SSLP1_MOUSE (Q3UN54    ), SSLP1_PIG   (P83106    ), TX101_CRIGR (Q7TQN2    ), 
TX101_HUMAN (Q9BY14    ), TX101_MOUSE (Q9JMI7    ), TX101_RAT   (Q924B5    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CD59_SHEEP  (P58020    )

		
PDB
[Detailed view]
20 PDB

1CDQ; 1CDR; 1CDS; 1ERG; 1ERH; 1YWH; 2FD6; 2I9B; 2J8B; 2OFS; 2UWR; 2UX2; 3BT1; 3BT2; 3LAQ; 3U73; 3U74; 4BIK; 4K24; 4QTI
» more

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