Entry: PS00990

General information about the entry

Entry name [info] CLAT_ADAPTOR_M_1
Accession [info] PS00990
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00761

Name and characterization of the entry

Description [info] Clathrin adaptor complexes medium chain signature 1.
Pattern [info]
[IVT]-[GSP]-W-R-x(2,3)-[GAD]-x(2)-[HY]-x(2)-N-x-[LIVMAFY](3)-D-[LIVM]-
[LIVMT]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 41 in 41 different sequences
Number of true positive hits 41 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.23 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

AP1M1_BOVIN (Q2KJ81    ), AP1M1_HUMAN (Q9BXS5    ), AP1M1_MOUSE (P35585    ), 
AP1M1_RAT   (Q32Q06    ), AP1M1_SCHPO (Q9HFE5    ), AP1M1_YEAST (Q00776    ), 
AP1M2_ARATH (O22715    ), AP1M2_BOVIN (Q3SYW1    ), AP1M2_HUMAN (Q9Y6Q5    ), 
AP1M2_MOUSE (Q9WVP1    ), AP1M_CAEEL  (P35602    ), AP1M_DICDI  (Q54HS9    ), 
AP1M_DIPOM  (P47795    ), AP2M1_BOVIN (Q3ZC13    ), AP2M1_CHICK (Q5ZMP6    ), 
AP2M1_HUMAN (Q96CW1    ), AP2M1_MACFA (Q4R706    ), AP2M1_MOUSE (P84091    ), 
AP2M1_PONAB (Q5NVF7    ), AP2M1_RAT   (P84092    ), AP2M1_XENLA (Q801Q8    ), 
AP2M1_XENTR (Q6P856    ), AP2MA_DANRE (Q6NWK2    ), AP2MB_DANRE (Q7ZW98    ), 
AP2M_ARATH  (O23140    ), AP2M_CAEEL  (P35603    ), AP2M_DICDI  (P54672    ), 
AP2M_SCHPO  (Q09718    ), AP3M1_BOVIN (Q24K11    ), AP3M1_CHICK (Q5ZMP7    ), 
AP3M1_HUMAN (Q9Y2T2    ), AP3M1_MOUSE (Q9JKC8    ), AP3M1_PONAB (Q5R478    ), 
AP3M1_RAT   (P53676    ), AP3M2_HUMAN (P53677    ), AP3M2_MOUSE (Q8R2R9    ), 
AP3M2_RAT   (P53678    ), AP3M_ARATH  (F4I562    ), AP3M_ASHGO  (Q750L8    ), 
AP3M_YEAST  (P38153    ), APM2_YEAST  (P38700    )
» more

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

AP3M_DICDI  (Q9GPF1    ), AP4M1_BOVIN (Q29RY8    ), AP4M1_HUMAN (O00189    ), 
AP4M1_MOUSE (Q9JKC7    ), AP4M1_RAT   (Q2PWT8    ), AP4M_DICDI  (Q9GPF0    )
» more

PDB
[Detailed view]
17 PDB

1BW8; 1BXX; 1HES; 1I31; 1W63; 2BP5; 2JKR; 2JKT; 2PR9; 2VGL; 2XA7; 3H85; 4HMY; 4IKN; 4P6Z; 4UQI; 5FPI
» more

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