Entry: PS00991

General information about the entry
Entry name CLAT_ADAPTOR_M_2
Accession number PS00991
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00761
Name and characterization of the entry
DescriptionClathrin adaptor complexes medium chain signature 2.
Pattern [LIV]-x-[FL]-[IQ]-P-P-x-G-x-[LIVMFY]-x-[LV]-x(2)-Y.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 42 hits in 42 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 42 hits in 42 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 97.67 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AP1M1_BOVIN (Q2KJ81), AP1M1_HUMAN (Q9BXS5), AP1M1_MOUSE (P35585), 
AP1M1_RAT   (Q32Q06), AP1M1_SCHPO (Q9HFE5), AP1M1_YEAST (Q00776), 
AP1M2_BOVIN (Q3SYW1), AP1M2_HUMAN (Q9Y6Q5), AP1M2_MOUSE (Q9WVP1), 
AP1M_CAEEL  (P35602), AP1M_DICDI  (Q54HS9), AP1M_DIPOM  (P47795), 
AP2M1_BOVIN (Q3ZC13), AP2M1_CHICK (Q5ZMP6), AP2M1_HUMAN (Q96CW1), 
AP2M1_MACFA (Q4R706), AP2M1_MOUSE (P84091), AP2M1_PONAB (Q5NVF7), 
AP2M1_RAT   (P84092), AP2M1_XENLA (Q801Q8), AP2M1_XENTR (Q6P856), 
AP2MA_DANRE (Q6NWK2), AP2MB_DANRE (Q7ZW98), AP2M_CAEEL  (P35603), 
AP2M_DICDI  (P54672), AP2M_SCHPO  (Q09718), AP3M1_BOVIN (Q24K11), 
AP3M1_CHICK (Q5ZMP7), AP3M1_HUMAN (Q9Y2T2), AP3M1_MOUSE (Q9JKC8), 
AP3M1_PONAB (Q5R478), AP3M1_RAT   (P53676), AP3M2_HUMAN (P53677), 
AP3M2_MOUSE (Q8R2R9), AP3M2_RAT   (P53678), AP3M_DICDI  (Q9GPF1), 
AP3M_YEAST  (P38153), AP4M1_BOVIN (Q29RY8), AP4M1_HUMAN (O00189), 
AP4M1_MOUSE (Q9JKC7), AP4M1_RAT   (Q2PWT8), APM2_YEAST  (P38700)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AP4M_DICDI  (Q9GPF0)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1BW8; 1BXX; 1H6E; 1HES; 1I31; 1W63; 2BP5; 2JKR; 2JKT; 2PR9; 2VGL; 2XA7; 3H85; 3L81; 3ML6; 4EMZ; 4EN2; 4HMY; 4IKN;

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